Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_I11
(96 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 1.0
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 21 1.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 1.8
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 19 4.1
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 19 4.1
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 19 4.1
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 19 5.4
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 19 5.4
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 19 5.4
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 19 7.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 18 9.4
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 18 9.4
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 18 9.4
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.4 bits (43), Expect = 1.0
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 11 SPHQCRTRPG 40
SPH CRT+ G
Sbjct: 21 SPHTCRTKNG 30
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 20.6 bits (41), Expect = 1.8
Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = -1
Query: 96 CRPHPKCGGRPRGVSGRF--TPGRVLHWC 16
C P CG RP VS T V++ C
Sbjct: 16 CSPSVHCGTRPSFVSDEMIATAASVVNAC 44
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 20.6 bits (41), Expect = 1.8
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = +2
Query: 5 EASPHQCRTRPGVKRPETPRGRPP 76
+ SPHQ P P P PP
Sbjct: 24 QPSPHQSPQAPQRGSPPNPSQGPP 47
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2
Query: 53 LGASRPGESYT 21
L A+RP ESYT
Sbjct: 16 LVAARPDESYT 26
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2
Query: 53 LGASRPGESYT 21
L A+RP ESYT
Sbjct: 16 LVAARPDESYT 26
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2
Query: 53 LGASRPGESYT 21
L A+RP ESYT
Sbjct: 16 LVAARPDESYT 26
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 19.0 bits (37), Expect = 5.4
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -2
Query: 95 VAPIPNAADGPGGFLGASRPG 33
++P+P+ + G G+S PG
Sbjct: 377 MSPLPSIRNRSGLVSGSSTPG 397
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 19.0 bits (37), Expect = 5.4
Identities = 6/12 (50%), Positives = 6/12 (50%)
Frame = +2
Query: 2 HEASPHQCRTRP 37
HEA H C P
Sbjct: 272 HEAGSHSCEACP 283
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 19.0 bits (37), Expect = 5.4
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = +2
Query: 17 HQCRTRPGVKRPETPRGRPPHLGWG 91
H RTR G K+ R + WG
Sbjct: 44 HTVRTRGGNKKYRALRLDTGNFSWG 68
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 18.6 bits (36), Expect = 7.1
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 28 DSPGREAPRNPPGPSA 75
D+P + AP PP S+
Sbjct: 336 DTPPKPAPPPPPPSSS 351
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 18.2 bits (35), Expect = 9.4
Identities = 5/8 (62%), Positives = 8/8 (100%)
Frame = -1
Query: 69 RPRGVSGR 46
RP+G++GR
Sbjct: 225 RPKGINGR 232
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 18.2 bits (35), Expect = 9.4
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +3
Query: 81 WDGGD 95
WDGGD
Sbjct: 31 WDGGD 35
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 18.2 bits (35), Expect = 9.4
Identities = 5/8 (62%), Positives = 8/8 (100%)
Frame = -1
Query: 69 RPRGVSGR 46
RP+G++GR
Sbjct: 220 RPKGINGR 227
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,359
Number of Sequences: 438
Number of extensions: 516
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 13
effective length of database: 140,649
effective search space used: 2531682
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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