SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_I10
         (474 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U20352-1|AAC16436.1|  334|Homo sapiens malate dehydrogenase prot...   176   4e-44
D55654-1|BAA09513.1|  334|Homo sapiens cytosolic malate dehydrog...   176   4e-44
CR457405-1|CAG33686.1|  334|Homo sapiens MDH1 protein.                176   4e-44
BC001484-1|AAH01484.1|  334|Homo sapiens malate dehydrogenase 1,...   176   4e-44
AC016734-1|AAY14893.1|  334|Homo sapiens unknown protein.             176   4e-44
BC088356-1|AAH88356.1|  518|Homo sapiens malate dehydrogenase 1B...    38   0.013
X63337-1|CAA44937.1|  177|Homo sapiens high sulfur keratin protein.    29   0.37 
BC105071-1|AAI05072.1|  177|Homo sapiens keratin associated prot...    29   0.37 
BC105069-1|AAI05070.1|  177|Homo sapiens keratin associated prot...    29   0.37 
AJ406926-1|CAC27565.1|  177|Homo sapiens keratin associated prot...    29   0.37 
AB052934-1|BAB61026.1|  177|Homo sapiens keratin associated prot...    29   0.37 
AB052868-1|BAB61024.1|  131|Homo sapiens keratin associated prot...    29   0.38 
AB055057-1|BAB61031.1|   85|Homo sapiens keratin associated prot...    29   0.43 
X63338-1|CAA44938.1|  175|Homo sapiens high sulfur keratin protein.    31   2.7  
BC101153-1|AAI01154.1|  167|Homo sapiens keratin associated prot...    31   2.7  
BC101152-1|AAI01153.1|  177|Homo sapiens KRTAP1-3 protein protein.     31   2.7  
BC101151-1|AAI01152.1|  167|Homo sapiens keratin associated prot...    31   2.7  
BC101150-1|AAI01151.1|  167|Homo sapiens keratin associated prot...    31   2.7  
BC069161-1|AAH69161.1|  167|Homo sapiens keratin associated prot...    31   2.7  
AJ406927-1|CAC27566.1|  167|Homo sapiens keratin associated prot...    31   2.7  
AB081339-1|BAC15620.1|  141|Homo sapiens keratin associated prot...    31   2.7  
AB081338-1|BAC15619.1|  177|Homo sapiens keratin associated prot...    31   2.7  
BC101555-1|AAI01556.1|  174|Homo sapiens keratin associated prot...    30   4.7  
BC093841-1|AAH93841.1|  174|Homo sapiens keratin associated prot...    30   4.7  
BC069533-1|AAH69533.1|  174|Homo sapiens keratin associated prot...    30   4.7  
AJ406928-1|CAC27567.1|  174|Homo sapiens keratin associated prot...    30   4.7  

>U20352-1|AAC16436.1|  334|Homo sapiens malate dehydrogenase
           protein.
          Length = 334

 Score =  176 bits (428), Expect = 4e-44
 Identities = 86/151 (56%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
 Frame = +1

Query: 25  KILVVGNPANTNALICSKYAPSIPKENFTAMTRLDQNRAQSQIAAKLGVPVRDVKRVIIW 204
           K++VVGNPANTN L  SK APSIPKENF+ +TRLD NRA++QIA KLGV   DVK VIIW
Sbjct: 125 KVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDVKNVIIW 184

Query: 205 GNHSSTQFPDASNAVATIGGVEKSVPEAINDEDYLKNSFVTTVQKRGAAVIXXXXXXXXX 384
           GNHSSTQ+PD ++A   + G E  V EA+ D+ +LK  FVTTVQ+RGAAVI         
Sbjct: 185 GNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKLSSAM 244

Query: 385 XXXXXXXDHMRDWFLGTGDC-WVSLGVVSDG 474
                  DH+RD + GT +  +VS+GV+SDG
Sbjct: 245 SAAKAICDHVRDIWFGTPEGEFVSMGVISDG 275


>D55654-1|BAA09513.1|  334|Homo sapiens cytosolic malate
           dehydrogenase protein.
          Length = 334

 Score =  176 bits (428), Expect = 4e-44
 Identities = 86/151 (56%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
 Frame = +1

Query: 25  KILVVGNPANTNALICSKYAPSIPKENFTAMTRLDQNRAQSQIAAKLGVPVRDVKRVIIW 204
           K++VVGNPANTN L  SK APSIPKENF+ +TRLD NRA++QIA KLGV   DVK VIIW
Sbjct: 125 KVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDVKNVIIW 184

Query: 205 GNHSSTQFPDASNAVATIGGVEKSVPEAINDEDYLKNSFVTTVQKRGAAVIXXXXXXXXX 384
           GNHSSTQ+PD ++A   + G E  V EA+ D+ +LK  FVTTVQ+RGAAVI         
Sbjct: 185 GNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKLSSAM 244

Query: 385 XXXXXXXDHMRDWFLGTGDC-WVSLGVVSDG 474
                  DH+RD + GT +  +VS+GV+SDG
Sbjct: 245 SAAKAICDHVRDIWFGTPEGEFVSMGVISDG 275


>CR457405-1|CAG33686.1|  334|Homo sapiens MDH1 protein.
          Length = 334

 Score =  176 bits (428), Expect = 4e-44
 Identities = 86/151 (56%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
 Frame = +1

Query: 25  KILVVGNPANTNALICSKYAPSIPKENFTAMTRLDQNRAQSQIAAKLGVPVRDVKRVIIW 204
           K++VVGNPANTN L  SK APSIPKENF+ +TRLD NRA++QIA KLGV   DVK VIIW
Sbjct: 125 KVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDVKNVIIW 184

Query: 205 GNHSSTQFPDASNAVATIGGVEKSVPEAINDEDYLKNSFVTTVQKRGAAVIXXXXXXXXX 384
           GNHSSTQ+PD ++A   + G E  V EA+ D+ +LK  FVTTVQ+RGAAVI         
Sbjct: 185 GNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKLSSAM 244

Query: 385 XXXXXXXDHMRDWFLGTGDC-WVSLGVVSDG 474
                  DH+RD + GT +  +VS+GV+SDG
Sbjct: 245 SAAKAICDHVRDIWFGTPEGEFVSMGVISDG 275


>BC001484-1|AAH01484.1|  334|Homo sapiens malate dehydrogenase 1,
           NAD (soluble) protein.
          Length = 334

 Score =  176 bits (428), Expect = 4e-44
 Identities = 86/151 (56%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
 Frame = +1

Query: 25  KILVVGNPANTNALICSKYAPSIPKENFTAMTRLDQNRAQSQIAAKLGVPVRDVKRVIIW 204
           K++VVGNPANTN L  SK APSIPKENF+ +TRLD NRA++QIA KLGV   DVK VIIW
Sbjct: 125 KVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDVKNVIIW 184

Query: 205 GNHSSTQFPDASNAVATIGGVEKSVPEAINDEDYLKNSFVTTVQKRGAAVIXXXXXXXXX 384
           GNHSSTQ+PD ++A   + G E  V EA+ D+ +LK  FVTTVQ+RGAAVI         
Sbjct: 185 GNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKLSSAM 244

Query: 385 XXXXXXXDHMRDWFLGTGDC-WVSLGVVSDG 474
                  DH+RD + GT +  +VS+GV+SDG
Sbjct: 245 SAAKAICDHVRDIWFGTPEGEFVSMGVISDG 275


>AC016734-1|AAY14893.1|  334|Homo sapiens unknown protein.
          Length = 334

 Score =  176 bits (428), Expect = 4e-44
 Identities = 86/151 (56%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
 Frame = +1

Query: 25  KILVVGNPANTNALICSKYAPSIPKENFTAMTRLDQNRAQSQIAAKLGVPVRDVKRVIIW 204
           K++VVGNPANTN L  SK APSIPKENF+ +TRLD NRA++QIA KLGV   DVK VIIW
Sbjct: 125 KVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDVKNVIIW 184

Query: 205 GNHSSTQFPDASNAVATIGGVEKSVPEAINDEDYLKNSFVTTVQKRGAAVIXXXXXXXXX 384
           GNHSSTQ+PD ++A   + G E  V EA+ D+ +LK  FVTTVQ+RGAAVI         
Sbjct: 185 GNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKLSSAM 244

Query: 385 XXXXXXXDHMRDWFLGTGDC-WVSLGVVSDG 474
                  DH+RD + GT +  +VS+GV+SDG
Sbjct: 245 SAAKAICDHVRDIWFGTPEGEFVSMGVISDG 275


>BC088356-1|AAH88356.1|  518|Homo sapiens malate dehydrogenase 1B,
           NAD (soluble) protein.
          Length = 518

 Score = 38.3 bits (85), Expect = 0.013
 Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 11/161 (6%)
 Frame = +1

Query: 25  KILVVGNP-ANTNALICSKYAPSIPKENFTAMTRLDQNRAQSQIAAKLGVPVRDVKRVII 201
           +++V G    N   ++  +YAP I   N  A+    +  A++ +A KL      +K VII
Sbjct: 252 RVIVGGRTFVNLKTVLLMRYAPRIA-HNIIAVALGVEGEAKAILARKLKTAPSYIKDVII 310

Query: 202 WGNHSSTQFPDASNA------VATIGGVEKSVP--EAINDEDYLKNSFVTTVQKRGAAVI 357
           WGN S   + D           A  G +  S P    I D +++K  FV  ++     + 
Sbjct: 311 WGNISGNNYVDLRKTRVYRYESAIWGPLHYSRPVLNLIFDSEWVKREFVAILKN----LT 366

Query: 358 XXXXXXXXXXXXXXXXDHMRDWFLGT--GDCWVSLGVVSDG 474
                             ++ W+ G+  G+  VSLG++S+G
Sbjct: 367 TTGRQFGGILAAHSIATTLKYWYHGSPPGEI-VSLGILSEG 406


>X63337-1|CAA44937.1|  177|Homo sapiens high sulfur keratin protein.
          Length = 177

 Score = 29.5 bits (63), Expect(2) = 0.37
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*C 236
           C+ P CC++  A   C    + GQS   P+  C
Sbjct: 138 CTPPSCCQLHHAEASCCRPSYCGQSCCRPVCCC 170



 Score = 23.0 bits (47), Expect(2) = 0.37
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +3

Query: 345 CCCYCS 362
           CCCYCS
Sbjct: 168 CCCYCS 173


>BC105071-1|AAI05072.1|  177|Homo sapiens keratin associated protein
           1-1 protein.
          Length = 177

 Score = 29.5 bits (63), Expect(2) = 0.37
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*C 236
           C+ P CC++  A   C    + GQS   P+  C
Sbjct: 138 CTPPSCCQLHHAEASCCRPSYCGQSCCRPVCCC 170



 Score = 23.0 bits (47), Expect(2) = 0.37
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +3

Query: 345 CCCYCS 362
           CCCYCS
Sbjct: 168 CCCYCS 173


>BC105069-1|AAI05070.1|  177|Homo sapiens keratin associated protein
           1-1 protein.
          Length = 177

 Score = 29.5 bits (63), Expect(2) = 0.37
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*C 236
           C+ P CC++  A   C    + GQS   P+  C
Sbjct: 138 CTPPSCCQLHHAEASCCRPSYCGQSCCRPVCCC 170



 Score = 23.0 bits (47), Expect(2) = 0.37
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +3

Query: 345 CCCYCS 362
           CCCYCS
Sbjct: 168 CCCYCS 173


>AJ406926-1|CAC27565.1|  177|Homo sapiens keratin associated protein
           1.1 protein.
          Length = 177

 Score = 29.5 bits (63), Expect(2) = 0.37
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*C 236
           C+ P CC++  A   C    + GQS   P+  C
Sbjct: 138 CTPPSCCQLHHAEASCCRPSYCGQSCCRPVCCC 170



 Score = 23.0 bits (47), Expect(2) = 0.37
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +3

Query: 345 CCCYCS 362
           CCCYCS
Sbjct: 168 CCCYCS 173


>AB052934-1|BAB61026.1|  177|Homo sapiens keratin associated protein
           1.1A protein.
          Length = 177

 Score = 29.5 bits (63), Expect(2) = 0.37
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*C 236
           C+ P CC++  A   C    + GQS   P+  C
Sbjct: 138 CTPPSCCQLHHAEASCCRPSYCGQSCCRPVCCC 170



 Score = 23.0 bits (47), Expect(2) = 0.37
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +3

Query: 345 CCCYCS 362
           CCCYCS
Sbjct: 168 CCCYCS 173


>AB052868-1|BAB61024.1|  131|Homo sapiens keratin associated protein
           1.6 protein.
          Length = 131

 Score = 29.5 bits (63), Expect(2) = 0.38
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*C 236
           C+ P CC++  A   C    + GQS   P+  C
Sbjct: 92  CTPPSCCQLHHAEASCCRPSYCGQSCCRPVCCC 124



 Score = 23.0 bits (47), Expect(2) = 0.38
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +3

Query: 345 CCCYCS 362
           CCCYCS
Sbjct: 122 CCCYCS 127


>AB055057-1|BAB61031.1|   85|Homo sapiens keratin associated protein
           1.7 protein.
          Length = 85

 Score = 29.5 bits (63), Expect(2) = 0.43
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*C 236
           C+ P CC++  A   C    + GQS   P+  C
Sbjct: 46  CTPPSCCQLHHAEASCCRPSYCGQSCCRPVCCC 78



 Score = 23.0 bits (47), Expect(2) = 0.43
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +3

Query: 345 CCCYCS 362
           CCCYCS
Sbjct: 76  CCCYCS 81


>X63338-1|CAA44938.1|  175|Homo sapiens high sulfur keratin protein.
          Length = 175

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*CI*C 245
           C  P CC++  A   C    + GQS   P+  C  C
Sbjct: 137 CHTPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSC 172


>BC101153-1|AAI01154.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*CI*C 245
           C+ P CC++  A   C    + GQS   P+  C  C
Sbjct: 128 CTPPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSC 163


>BC101152-1|AAI01153.1|  177|Homo sapiens KRTAP1-3 protein protein.
          Length = 177

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*CI*C 245
           C+ P CC++  A   C    + GQS   P+  C  C
Sbjct: 138 CTPPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSC 173


>BC101151-1|AAI01152.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*CI*C 245
           C+ P CC++  A   C    + GQS   P+  C  C
Sbjct: 128 CTPPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSC 163


>BC101150-1|AAI01151.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*CI*C 245
           C+ P CC++  A   C    + GQS   P+  C  C
Sbjct: 128 CTPPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSC 163


>BC069161-1|AAH69161.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*CI*C 245
           C+ P CC++  A   C    + GQS   P+  C  C
Sbjct: 128 CTPPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSC 163


>AJ406927-1|CAC27566.1|  167|Homo sapiens keratin associated protein
           1.3 protein.
          Length = 167

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*CI*C 245
           C+ P CC++  A   C    + GQS   P+  C  C
Sbjct: 128 CTPPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSC 163


>AB081339-1|BAC15620.1|  141|Homo sapiens keratin associated protein
           1.9 protein.
          Length = 141

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*CI*C 245
           C+ P CC++  A   C    + GQS   P+  C  C
Sbjct: 102 CTPPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSC 137


>AB081338-1|BAC15619.1|  177|Homo sapiens keratin associated protein
           1.8 protein.
          Length = 177

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*CI*C 245
           C+ P CC++  A   C    + GQS   P+  C  C
Sbjct: 138 CTPPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSC 173


>BC101555-1|AAI01556.1|  174|Homo sapiens keratin associated protein
           1.5 protein.
          Length = 174

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*CI*CC 248
           C+ P CC++  A   C    + GQS   P+  C   C
Sbjct: 138 CTPPSCCQLHHAQASCCRPSYCGQSCCRPVCCCEPTC 174


>BC093841-1|AAH93841.1|  174|Homo sapiens keratin associated protein
           1-5 protein.
          Length = 174

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*CI*CC 248
           C+ P CC++  A   C    + GQS   P+  C   C
Sbjct: 138 CTPPSCCQLHHAQASCCRPSYCGQSCCRPVCCCEPTC 174


>BC069533-1|AAH69533.1|  174|Homo sapiens keratin associated protein
           1-5 protein.
          Length = 174

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*CI*CC 248
           C+ P CC++  A   C    + GQS   P+  C   C
Sbjct: 138 CTPPSCCQLHHAQASCCRPSYCGQSCCRPVCCCEPTC 174


>AJ406928-1|CAC27567.1|  174|Homo sapiens keratin associated protein
           1.5 protein.
          Length = 174

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +3

Query: 138 CSVPDCCKIRSAG*RCQESYHLGQSLLNPIS*CI*CC 248
           C+ P CC++  A   C    + GQS   P+  C   C
Sbjct: 138 CTPPSCCQLHHAQASCCRPSYCGQSCCRPVCCCEPTC 174


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.132    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,748,422
Number of Sequences: 237096
Number of extensions: 1245978
Number of successful extensions: 2424
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2419
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -