Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_I09
(534 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1585 + 34616343-34616531,34616677-34616742,34616842-346169... 108 3e-24
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 97 8e-21
06_01_0312 + 2246899-2247105,2247182-2247374,2247607-2247712,224... 92 2e-19
07_03_1645 + 28348897-28349100,28349263-28349334,28350113-283502... 78 5e-15
10_08_0451 + 18033065-18033253,18033746-18033805,18034256-180343... 73 1e-13
04_04_0349 + 24588184-24588315,24588481-24588543,24588674-245887... 37 0.009
06_03_0539 + 21919115-21919313,21919474-21919582,21920595-219208... 33 0.11
06_01_0227 - 1733119-1734099 33 0.11
02_01_0548 + 4035265-4035431,4035517-4035651,4035859-4036081,403... 33 0.19
06_01_0375 + 2699179-2699264,2699697-2699786,2699913-2699991,270... 32 0.25
05_01_0035 - 232656-232781,233212-233322,233419-233563,233749-23... 31 0.44
04_04_1360 + 32889597-32890343 31 0.58
10_02_0111 + 5381779-5382117,5382775-5382798 30 1.3
06_01_0446 - 3147007-3147111,3147215-3147367,3147445-3147497,314... 30 1.3
07_03_0548 + 19349943-19350290,19350372-19351100 29 1.8
06_03_0878 + 25606788-25606926,25607205-25607279,25607362-256074... 29 2.4
02_01_0175 - 1198657-1198737,1199080-1199190,1199488-1199540,120... 29 2.4
01_06_0361 + 28733493-28733523,28733743-28733870,28733982-287340... 29 2.4
05_07_0008 - 27007919-27007944,27008070-27008127,27008218-270082... 29 3.1
02_01_0151 + 1067067-1067222,1067586-1067690,1067904-1067990,106... 29 3.1
01_01_0130 + 1182504-1182817,1183024-1183152,1183582-1183716,118... 29 3.1
06_03_0925 - 25992699-25992836,25992920-25993033,25993199-259933... 28 4.1
01_01_1192 + 9511961-9512977,9513860-9514078 28 4.1
03_01_0257 + 1994645-1995061 28 5.4
12_02_0590 - 20853040-20853081,20853694-20853918,20854995-208558... 27 7.2
08_02_1431 + 27057706-27057900,27058701-27058815,27059123-270591... 27 7.2
08_01_0071 - 507595-507762,508027-508155,508567-508752,509306-50... 27 7.2
06_03_0021 + 15520342-15520443,15522217-15522867,15522980-155231... 27 7.2
05_06_0158 - 26054487-26054672,26054770-26055018,26056003-260566... 27 7.2
>04_04_1585 +
34616343-34616531,34616677-34616742,34616842-34616910,
34617408-34617443,34617877-34617942,34618216-34618284,
34618394-34618471,34618674-34618752,34618866-34618960,
34619056-34619140,34619390-34619571,34619681-34619799,
34620529-34620550
Length = 384
Score = 108 bits (259), Expect = 3e-24
Identities = 53/115 (46%), Positives = 74/115 (64%), Gaps = 3/115 (2%)
Frame = +2
Query: 194 AASTPVAEHGPDKNVTAEEMTSRDY---YFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNK 364
+A++P A D A + ++ YF SY+H GIHE M+KD VRT YR+A+ H++
Sbjct: 20 SAASPPATGDSDAAAAAADAPLAEHDRIYFQSYSHIGIHEAMIKDRVRTDAYRSAIMHHQ 79
Query: 365 HLFKGKTVLDIGCGTGILSMFAAKAGATKVIAVECSNIVDYARKIVEATTLSDVI 529
+GK V+D+GCGTGILS+F A+AGA V AVE S + AR+IV+A L D +
Sbjct: 80 KFIEGKVVMDVGCGTGILSVFCARAGAKCVYAVEASEMATQAREIVKANNLDDKV 134
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 97.1 bits (231), Expect = 8e-21
Identities = 47/81 (58%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 YFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNKHLFKGKTVLDIGCGTGILSMFAAKAGAT 448
YF SY+ FGIH EML D+VRT YR+A+ N L G TVLD+GCGTGILS+FAAKAGA+
Sbjct: 256 YFGSYSSFGIHREMLGDKVRTEAYRDALLGNPSLMNGATVLDVGCGTGILSLFAAKAGAS 315
Query: 449 KVIAVECS-NIVDYARKIVEA 508
+VIAV+ S +V A ++ ++
Sbjct: 316 RVIAVDGSAKMVSVATEVAKS 336
>06_01_0312 +
2246899-2247105,2247182-2247374,2247607-2247712,
2247958-2248147,2248472-2248657,2248739-2248822,
2249207-2249383
Length = 380
Score = 92.3 bits (219), Expect = 2e-19
Identities = 46/120 (38%), Positives = 76/120 (63%)
Frame = +2
Query: 173 VAQESTSAASTPVAEHGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNAM 352
+A AAS + G V +E+ +Y F +Y++ +EML D VR Y +A+
Sbjct: 1 MASLPNGAASASASAAGGGPAVVDKEVDFANY-FCTYSYLYHQKEMLCDRVRMDAYHSAV 59
Query: 353 YHNKHLFKGKTVLDIGCGTGILSMFAAKAGATKVIAVECSNIVDYARKIVEATTLSDVIE 532
+ N H F+GK VLD+G G+GIL++++A+AGA KV AVE +N+ ++AR++ A ++D++E
Sbjct: 60 FRNAHHFRGKVVLDVGTGSGILAIWSAQAGARKVYAVEATNMAEHARELARANDVADIVE 119
>07_03_1645 +
28348897-28349100,28349263-28349334,28350113-28350266,
28350973-28351116,28351213-28351316,28351401-28351499,
28351582-28351651,28352127-28352223,28352443-28352497,
28353507-28353590,28353851-28353928,28354027-28354130,
28354212-28354635,28355311-28355346
Length = 574
Score = 77.8 bits (183), Expect = 5e-15
Identities = 38/88 (43%), Positives = 57/88 (64%)
Frame = +2
Query: 239 TAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNKHLFKGKTVLDIGCGTGIL 418
T E +S YF Y + ML+D VRT TY A+ N+ F+G+ V+D+G G+GIL
Sbjct: 161 TKIEASSAKMYFHYYGQLLHQQNMLQDFVRTGTYYAAVMENRSDFEGRVVVDVGAGSGIL 220
Query: 419 SMFAAKAGATKVIAVECSNIVDYARKIV 502
S+FAA+AGA V AVE S + ++A++++
Sbjct: 221 SLFAAQAGARHVYAVEASEMAEHAQRLI 248
>10_08_0451 +
18033065-18033253,18033746-18033805,18034256-18034324,
18034751-18034786,18035081-18035146,18035345-18035443,
18035543-18035620,18035724-18035802,18035999-18036093,
18036251-18036335,18036505-18036698,18036804-18036922,
18037015-18037057
Length = 403
Score = 73.3 bits (172), Expect = 1e-13
Identities = 39/87 (44%), Positives = 52/87 (59%)
Frame = +2
Query: 269 YFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNKHLFKGKTVLDIGCGTGILSMFAAKAGAT 448
YF +Y+H G+HEEMLK + LF + VLD+GCGTG+LS+F A AGA
Sbjct: 48 YFKAYSHIGVHEEMLKIVNENCDRKRGWMCP--LFLVEVVLDVGCGTGVLSIFCAFAGAA 105
Query: 449 KVIAVECSNIVDYARKIVEATTLSDVI 529
+V AV+ S+I A +IV LSD +
Sbjct: 106 RVYAVDASDIALQAMEIVRENELSDKV 132
>04_04_0349 +
24588184-24588315,24588481-24588543,24588674-24588740,
24588819-24588919,24589082-24589126,24589236-24589697,
24589905-24590075
Length = 346
Score = 37.1 bits (82), Expect = 0.009
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 341 RNAMYHNKHLFKGKTVLDIGCGTGILSMFAAKAGATKV 454
+N + + F+GK VL++GCG+G+ +FA GA+ V
Sbjct: 104 KNEIRDGQLSFRGKRVLELGCGSGLAGIFACLKGASTV 141
>06_03_0539 +
21919115-21919313,21919474-21919582,21920595-21920819,
21921140-21921239,21921782-21921865,21922000-21922058,
21922578-21922770
Length = 322
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 377 GKTVLDIGCGTGILSMFAAKAGATKVIAVECSNIVDYA 490
G+T+LD+GCG G LS++ AK + I C++ A
Sbjct: 134 GQTILDVGCGWGSLSLYIAKKYSKCSITGICNSTTQKA 171
>06_01_0227 - 1733119-1734099
Length = 326
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 377 GKTVLDIGCGTGILSMFAAKAGATKVIAVECSNIVDYARKIVEATTLS 520
G TV D GCGTG L++ A GA+ + + + +V A++ EA ++
Sbjct: 150 GATVCDAGCGTGSLAIPLASQGASVLASDISAAMVSEAQRQAEAAAMA 197
>02_01_0548 +
4035265-4035431,4035517-4035651,4035859-4036081,
4036282-4036468,4036627-4036811,4037435-4037572,
4037995-4038123
Length = 387
Score = 32.7 bits (71), Expect = 0.19
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 368 LFKGKTVLDIGCGTGILSMFAAKAGATKVIAVECS-NIVDYARK 496
L K + VLD+ C +G ++ AAK GA VI ++ S + +D A K
Sbjct: 208 LSKDQRVLDLCCYSGGFALNAAKGGANNVIGIDSSASALDLANK 251
>06_01_0375 +
2699179-2699264,2699697-2699786,2699913-2699991,
2700816-2700893,2701290-2701338,2702183-2702232,
2702704-2702853,2703437-2703517,2703593-2703609,
2705804-2705893,2706033-2706111,2706234-2706311,
2707554-2707687,2707858-2707936,2708108-2708188,
2708263-2708400
Length = 452
Score = 32.3 bits (70), Expect = 0.25
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +2
Query: 374 KGKTVLDIGCGTGILSMFAAKAGATKVIAVECSNIVDYARKIVEATTLSD 523
+G V+D+GCG GILS A+ GAT V ++ VD KI SD
Sbjct: 69 EGLKVIDVGCGGGILSEPLARMGAT-VTGIDA---VDKNIKIARVHAASD 114
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 374 KGKTVLDIGCGTGILSMFAAKAGAT 448
+G ++D+GC G+LS A+ GAT
Sbjct: 267 EGLKIIDVGCAAGMLSEPLARMGAT 291
>05_01_0035 -
232656-232781,233212-233322,233419-233563,233749-233882,
234341-234412,234485-234548,234632-234699,234894-235129,
236857-237166,237495-238460,238752-238931,239041-239346,
239593-239727,239810-240046,240120-240308,240521-240709,
240929-241024,241117-241323,241700-241893,242979-243216
Length = 1400
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 338 YRNAMYHNKHLFKGKTVLDIGCGTGILSM-FAAKAGATKVIAVE 466
Y H +F+ KTV ++GCG G +S+ A K +KV ++
Sbjct: 106 YEGLNRHPDSIFRDKTVAELGCGNGWISIALAEKWSPSKVYGLD 149
>04_04_1360 + 32889597-32890343
Length = 248
Score = 31.1 bits (67), Expect = 0.58
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 1/122 (0%)
Frame = +2
Query: 158 MESMDVAQESTSAASTPVAEHGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLT 337
ME M+V A+ VA G + + E RD D + L D L
Sbjct: 1 MEMMEVVATEIMDAALHVAVAG--RTLAVAE---RDGTHDPATGRALTGSWLWDSSLVLA 55
Query: 338 YRNAMYHNKHLFKGKTVLDIGCGTGILSMFA-AKAGATKVIAVECSNIVDYARKIVEATT 514
A + H +G TVL++G GTG+ + A A GA + + + ++ R +A
Sbjct: 56 SHLASCVHHHHLRGATVLELGAGTGLPGIAAVACLGAARCVLTDVRPLLPGLRANADANG 115
Query: 515 LS 520
L+
Sbjct: 116 LT 117
>10_02_0111 + 5381779-5382117,5382775-5382798
Length = 120
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 383 TVLDIGCGTGILSMFAAKAGATKVIAVE 466
TVL+IG GTG L+ +AG V+AVE
Sbjct: 63 TVLEIGPGTGNLTKRLLQAGVKAVVAVE 90
>06_01_0446 -
3147007-3147111,3147215-3147367,3147445-3147497,
3147670-3147988,3148754-3148892,3149141-3149222,
3149711-3149789,3150135-3150314,3150811-3151070,
3151192-3151294,3151469-3151609,3151797-3151870,
3153536-3153635,3154108-3154167,3154381-3154428,
3154519-3154610,3155023-3155071,3155810-3155879,
3156408-3156505,3157288-3157347
Length = 754
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 377 GKTVLDIGCGTGILSMFAAKAGATKVIAVE 466
GK V D GCG G LS+ ++ A V+ ++
Sbjct: 30 GKVVADFGCGCGTLSVASSLLDAEHVVGID 59
>07_03_0548 + 19349943-19350290,19350372-19351100
Length = 358
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 344 NAMYHNKHLFKGKTVLDIGCGTGILSMFAAKAGATKVIAVECS-NIVDYARKIVEATTLS 520
+A+ L G VL++G GTG L++ ++ A +V AVE +VD V+A L+
Sbjct: 53 DAIVRRAALRPGDAVLEVGPGTGNLTVRLLESPAARVSAVEIDPRMVDAVTARVDALGLA 112
>06_03_0878 +
25606788-25606926,25607205-25607279,25607362-25607426,
25607504-25607606,25607712-25607762,25608271-25608424,
25608781-25608925,25609039-25609144,25609267-25609415
Length = 328
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 371 FKGKTVLDIGCGTGILSMFAAKAGATKVIAVECSNIVD 484
F G T ++IG GTG++ + A+ I S+I+D
Sbjct: 115 FNGVTAIEIGAGTGLVGLALARVAKKIFITDRGSDILD 152
>02_01_0175 -
1198657-1198737,1199080-1199190,1199488-1199540,
1200131-1200215,1200519-1200614,1200729-1200821,
1201640-1201696,1201826-1201975,1202819-1202893
Length = 266
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +2
Query: 374 KGKTVLDIGCGTGILSMFAAKAGATKVIAVE 466
+G VL+IG GTG L+ AGAT V AVE
Sbjct: 45 EGDVVLEIGPGTGSLTAALLDAGAT-VFAVE 74
>01_06_0361 +
28733493-28733523,28733743-28733870,28733982-28734044,
28735074-28735211,28735357-28735494,28735700-28735843,
28736065-28736175,28736260-28736401,28736469-28736779,
28737057-28737218,28737313-28737366,28737472-28737546,
28737636-28737731
Length = 530
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 377 GKTVLDIGCGTGILSMFAAKAGATKVIAVECS-NIVDYA 490
G+ VLD+GCG G + A V+ ++ S N+V +A
Sbjct: 323 GQNVLDVGCGIGGGDFYMADKYDVHVVGIDLSINMVSFA 361
>05_07_0008 -
27007919-27007944,27008070-27008127,27008218-27008292,
27008417-27008470,27008574-27008840,27008913-27009193,
27009268-27009409,27009491-27009601,27009975-27010013,
27010173-27010310,27010415-27010552,27011438-27011562,
27011702-27011723
Length = 491
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 377 GKTVLDIGCGTGILSMFAAKAGATKVIAVECS-NIVDYA 490
G+ VLD+GCG G + A+ V+ ++ S N+V +A
Sbjct: 253 GQKVLDVGCGIGGGDFYMAENYDAHVLGIDLSINMVSFA 291
>02_01_0151 +
1067067-1067222,1067586-1067690,1067904-1067990,
1068071-1068121,1068265-1068291,1068292-1068385,
1068610-1068845
Length = 251
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 350 MYHNKHLFKGKTVLDIGCGTGILSMFAAKAGA 445
++ + F TV+++G GT + + AAK GA
Sbjct: 73 VWQQRSRFTASTVVELGAGTSLPGLVAAKVGA 104
>01_01_0130 +
1182504-1182817,1183024-1183152,1183582-1183716,
1184296-1184392,1184633-1184736,1184924-1184975,
1185261-1185458
Length = 342
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 359 NKHLFKGKTVLDIGCGTGILSMFAAKAGATKVIAVECS-NIVDYARKI 499
NK L + +VLDIG G+G LS AK G + + ++ S ++ AR +
Sbjct: 167 NKDL-RSCSVLDIGTGSGRLSQQLAKQGFSDLTGIDHSEGAIEVARNL 213
>06_03_0925 -
25992699-25992836,25992920-25993033,25993199-25993310,
25993686-25993879,25994075-25994297,25994383-25994483,
25995108-25995137,25995182-25995337
Length = 355
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 377 GKTVLDIGCGTGILSMFAAKAGA-TKVIAVECS 472
G +LD+ CG+G+ + AK+G+ + VIA++ S
Sbjct: 183 GGVLLDVSCGSGLFTRKFAKSGSYSAVIALDFS 215
>01_01_1192 + 9511961-9512977,9513860-9514078
Length = 411
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 344 NAMYHNKHLFKGKTVLDIGCG-TGILSMFAAKAGATKVIAV 463
+A Y + FKG++VL +GCG +G + AG +++
Sbjct: 173 SADYRSAGAFKGRSVLVVGCGNSGFEIAYDLAAGGAAAVSI 213
>03_01_0257 + 1994645-1995061
Length = 138
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 173 VAQESTSAASTPVAEHGPDKNVTAEEMTSRDYYFDS 280
+A S +AA+ AE G D N+TA ++ YF++
Sbjct: 1 MASSSAAAATYRCAECGADLNLTAAQLYPEGVYFEA 36
>12_02_0590 -
20853040-20853081,20853694-20853918,20854995-20855886,
20856120-20856122,20856284-20856513
Length = 463
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 155 EMESMDVAQESTSAASTPVAEHGPDKNVTAEEM 253
EM+S VA E+TS+ + V GP +T E +
Sbjct: 242 EMDSRVVAHETTSSLTNGVISSGPSAVITNESL 274
>08_02_1431 +
27057706-27057900,27058701-27058815,27059123-27059170,
27059272-27059524,27059689-27059776,27059883-27059948,
27060335-27060403,27060492-27060597,27060639-27060793,
27061208-27061537
Length = 474
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 371 FKGKTVLDIGCGTGILSM-FAAKAGATKVIAVEC-SNIVDYA 490
F+ K LDIGC G++++ AAK ++ V+ S +++ A
Sbjct: 84 FESKDCLDIGCNQGLVTIGLAAKFKCQSILGVDIDSGLIETA 125
>08_01_0071 -
507595-507762,508027-508155,508567-508752,509306-509381,
509477-509559,509778-509885,510420-510497,511762-511827
Length = 297
Score = 27.5 bits (58), Expect = 7.2
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +2
Query: 152 LEMESMDVAQESTS--AASTPV----AEHGPDKNVTAEEMTSRDYYFDSYAHFGIHEEML 313
L+ E++D +S A T V +E G N T EE+T YY S+ +G EE+
Sbjct: 81 LQSEALDDPSQSHEKFAVGTKVQAVWSEDGEWYNATIEELTENGYYV-SFEGWGNKEEVD 139
Query: 314 KDEVRTL 334
VR+L
Sbjct: 140 PANVRSL 146
>06_03_0021 +
15520342-15520443,15522217-15522867,15522980-15523186,
15523698-15523913,15523992-15524214,15525052-15525299,
15525385-15525563,15525803-15526056,15526237-15526388
Length = 743
Score = 27.5 bits (58), Expect = 7.2
Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 2/100 (2%)
Frame = +2
Query: 164 SMDVAQESTSAASTPVAEHGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYR 343
SMDV +T + + + D N +E S DS + + TL
Sbjct: 415 SMDVKASNTISPENSMVQTNQDVNT--KEYCSTQRTSDSSIIWRSPVDFPDARPETLQKT 472
Query: 344 NAMYHN--KHLFKGKTVLDIGCGTGILSMFAAKAGATKVI 457
++ H + + +G V+ G GTGI + F G ++
Sbjct: 473 KSVLHKLKQQIVEGTPVIGAGAGTGISAKFEEAGGVDLIV 512
>05_06_0158 -
26054487-26054672,26054770-26055018,26056003-26056611,
26056970-26056972
Length = 348
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 317 DEVRTLTYRNAMYHNKHLFKGKTVLDIGCG 406
+E R + Y + F GKTVL +GCG
Sbjct: 155 EEFRGSVIHTSAYKSGSKFAGKTVLVVGCG 184
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,326,243
Number of Sequences: 37544
Number of extensions: 292041
Number of successful extensions: 844
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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