Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_I09
(534 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical... 149 9e-37
AL034364-2|CAA22252.1| 630|Caenorhabditis elegans Hypothetical ... 43 2e-04
AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical... 38 0.006
Z66514-2|CAA91342.1| 229|Caenorhabditis elegans Hypothetical pr... 37 0.010
U97194-6|AAB52451.2| 244|Caenorhabditis elegans Hypothetical pr... 35 0.032
AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical ... 34 0.056
Z37139-6|CAB63431.2| 591|Caenorhabditis elegans Hypothetical pr... 32 0.23
AF016662-8|AAB66061.2| 234|Caenorhabditis elegans Hypothetical ... 31 0.52
Z46241-7|CAA86320.1| 214|Caenorhabditis elegans Hypothetical pr... 30 0.91
L12018-9|AAA65465.2| 243|Caenorhabditis elegans Hypothetical pr... 30 1.2
CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical... 30 1.2
CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical... 30 1.2
AL023828-21|CAA19466.1| 381|Caenorhabditis elegans Hypothetical... 30 1.2
AL023828-20|CAA19465.1| 378|Caenorhabditis elegans Hypothetical... 30 1.2
Z83234-1|CAB70169.1| 313|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z93390-3|CAB07676.1| 680|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 27 8.5
U39851-5|AAZ32802.1| 408|Caenorhabditis elegans Hypothetical pr... 27 8.5
U39851-4|AAZ32803.1| 572|Caenorhabditis elegans Hypothetical pr... 27 8.5
U39851-3|AAZ32804.1| 563|Caenorhabditis elegans Hypothetical pr... 27 8.5
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 27 8.5
>AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical
protein Y113G7B.17 protein.
Length = 348
Score = 149 bits (362), Expect = 9e-37
Identities = 73/120 (60%), Positives = 90/120 (75%)
Frame = +2
Query: 173 VAQESTSAASTPVAEHGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNAM 352
++ E+ +A PVA P A+E+TS+DYYFDSYAHFGIHEEMLKDEVRT TYRN++
Sbjct: 1 MSTENGKSADAPVA--AP----AAKELTSKDYYFDSYAHFGIHEEMLKDEVRTTTYRNSI 54
Query: 353 YHNKHLFKGKTVLDIGCGTGILSMFAAKAGATKVIAVECSNIVDYARKIVEATTLSDVIE 532
YHN HLFK K V+D+G GTGILSMFAAKAGA KV A+E SN+ +RKI+ L ++E
Sbjct: 55 YHNSHLFKDKVVMDVGSGTGILSMFAAKAGAKKVFAMEFSNMALTSRKIIADNNLDHIVE 114
>AL034364-2|CAA22252.1| 630|Caenorhabditis elegans Hypothetical
protein W06D4.4 protein.
Length = 630
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 386 VLDIGCGTGILSMFAAKAGATKVIAVEC-SNIVDYARKIVEATTLSDVI 529
VLDIG GTG+LS+ AA+ GA KV A+E + D AR I + SD I
Sbjct: 68 VLDIGTGTGLLSLMAAREGADKVTALEVFKPMGDCARHITSNSPWSDKI 116
>AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical
protein C23H5.1 protein.
Length = 252
Score = 37.5 bits (83), Expect = 0.006
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 272 FDSYAHFGIHEEML-KDEVRTLTYRNAMYHNKHLFKGKTVLDIGCGTGILSMFAAKAGAT 448
F S A+ ++ L +D + T T + A H+ GK VLD+GCG G S + GA
Sbjct: 4 FPSEAYTEAQQKWLGRDHLITPTIKKAF---GHILVGKEVLDVGCGNGHYSFDFLRWGAH 60
Query: 449 KVIAVECS 472
KV V+ S
Sbjct: 61 KVFGVDNS 68
>Z66514-2|CAA91342.1| 229|Caenorhabditis elegans Hypothetical
protein K01A11.2 protein.
Length = 229
Score = 36.7 bits (81), Expect = 0.010
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 359 NKHLFKGKTVLDIGCGTGILSMFAAKAGATKVIA 460
N+ LF GK+VL++GCG + S+ A GA +V A
Sbjct: 70 NQTLFAGKSVLELGCGAALPSILTAVHGAKEVFA 103
>U97194-6|AAB52451.2| 244|Caenorhabditis elegans Hypothetical
protein C37A2.6 protein.
Length = 244
Score = 35.1 bits (77), Expect = 0.032
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 359 NKHLFKGKTVLDIGCGTGILSMFAAKAGATKVIA 460
NK LF+G ++D G G G S+ A+ GA K++A
Sbjct: 71 NKPLFQGSEIVDFGAGCGSASISASICGAKKILA 104
>AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical
protein C18H7.9 protein.
Length = 144
Score = 34.3 bits (75), Expect = 0.056
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +2
Query: 362 KHLFKGKTVLDIGCGTGILSMFAAKAGATKVIAVECS 472
K+ K K VLDIGCG G+ S + GA KV+ + S
Sbjct: 33 KYNLKDKKVLDIGCGNGLNSTTFLQWGARKVVGFDNS 69
>Z37139-6|CAB63431.2| 591|Caenorhabditis elegans Hypothetical
protein C14B1.10 protein.
Length = 591
Score = 32.3 bits (70), Expect = 0.23
Identities = 21/77 (27%), Positives = 31/77 (40%)
Frame = +2
Query: 266 YYFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNKHLFKGKTVLDIGCGTGILSMFAAKAGA 445
Y D Y + H DE R +++ + +G + D+GCG G K G
Sbjct: 358 YVSDVYENIASHF----DETRHSSWKAVKQFINEIPRGSVMYDVGCGNG--KYLIPKDGL 411
Query: 446 TKVIAVECSNIVDYARK 496
K+ C + D ARK
Sbjct: 412 LKIGCDMCMGLCDIARK 428
>AF016662-8|AAB66061.2| 234|Caenorhabditis elegans Hypothetical
protein C33C12.9 protein.
Length = 234
Score = 31.1 bits (67), Expect = 0.52
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +2
Query: 380 KTVLDIGCGTGILSMFAAKAGATKVIAVECSNIVDYARKI-VEATTLSDV 526
K VL+IGCG+G++S F +A V +V +++ +A + +E L+D+
Sbjct: 58 KLVLEIGCGSGVVSTFVNQALGGNVTSV-ATDLNPHALDVTLETAKLNDI 106
>Z46241-7|CAA86320.1| 214|Caenorhabditis elegans Hypothetical
protein C38D4.9 protein.
Length = 214
Score = 30.3 bits (65), Expect = 0.91
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 371 FKGKTVLDIGCGTGILSMFAA 433
F+GK ++DIGCG G+L AA
Sbjct: 46 FEGKKLIDIGCGCGMLMTTAA 66
>L12018-9|AAA65465.2| 243|Caenorhabditis elegans Hypothetical
protein F22B7.9 protein.
Length = 243
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 371 FKGKTVLDIGCGTGILSMFAAKAGATKV 454
F GK+VL+IG TG+ S++A + GA ++
Sbjct: 82 FDGKSVLEIGFVTGLPSVYAFENGAEEI 109
>CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical
protein C42C1.13b protein.
Length = 206
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 371 FKGKTVLDIGCGTGILSMFAAKAGATKVI 457
F+GK VL++G GTG+ + A GA +I
Sbjct: 52 FEGKKVLELGSGTGVGGIALAALGADVII 80
>CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical
protein C42C1.13a protein.
Length = 167
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 371 FKGKTVLDIGCGTGILSMFAAKAGATKVI 457
F+GK VL++G GTG+ + A GA +I
Sbjct: 13 FEGKKVLELGSGTGVGGIALAALGADVII 41
>AL023828-21|CAA19466.1| 381|Caenorhabditis elegans Hypothetical
protein Y17G7B.18b protein.
Length = 381
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 362 KHLFKGKTVLDIGCGTGILSMFAAK-AGATKVIAVEC-SNIVDYARK 496
K F+ K LDIGC G L++ AK ++I ++ +++ ARK
Sbjct: 147 KDWFEHKQALDIGCNAGFLTLSIAKDFSPRRIIGIDIDEHLIGVARK 193
>AL023828-20|CAA19465.1| 378|Caenorhabditis elegans Hypothetical
protein Y17G7B.18a protein.
Length = 378
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 362 KHLFKGKTVLDIGCGTGILSMFAAK-AGATKVIAVEC-SNIVDYARK 496
K F+ K LDIGC G L++ AK ++I ++ +++ ARK
Sbjct: 144 KDWFEHKQALDIGCNAGFLTLSIAKDFSPRRIIGIDIDEHLIGVARK 190
>Z83234-1|CAB70169.1| 313|Caenorhabditis elegans Hypothetical
protein K09E4.3 protein.
Length = 313
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 386 VLDIGCGTGILSMFAAKAGATKVIAVECS 472
VLDIGCG G ++ K K+I V+ S
Sbjct: 49 VLDIGCGVGHIAPHLIKENVGKIIQVDMS 77
>Z93390-3|CAB07676.1| 680|Caenorhabditis elegans Hypothetical
protein T23B5.1a protein.
Length = 680
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2
Query: 299 HEEMLKDEVRTLTYRNAMYHNKHLFKGKTVLDIGCGTGILSMFAAK 436
H M+ D R + A+ ++ + V DIG GTGILS AA+
Sbjct: 142 HIRMINDVKRNEAFAKAL-NDTIKSRITVVFDIGSGTGILSAIAAR 186
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 302 EEMLKDEVRTLTYRNAMYHNKHLFKGK 382
E + DEVRT TYR +++H + L GK
Sbjct: 77 EPTVVDEVRTGTYR-SLFHPEQLLSGK 102
>U39851-5|AAZ32802.1| 408|Caenorhabditis elegans Hypothetical
protein C23G10.7a protein.
Length = 408
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 335 TYRNAMYHNKHLFKGKTVLDIGCGTGILSMFAAKAG 442
+Y N + ++ L K +DIGCG G+L K G
Sbjct: 229 SYINELVNSDLLPKPNKFVDIGCGNGLLVHLLNKIG 264
>U39851-4|AAZ32803.1| 572|Caenorhabditis elegans Hypothetical
protein C23G10.7b protein.
Length = 572
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 335 TYRNAMYHNKHLFKGKTVLDIGCGTGILSMFAAKAG 442
+Y N + ++ L K +DIGCG G+L K G
Sbjct: 229 SYINELVNSDLLPKPNKFVDIGCGNGLLVHLLNKIG 264
>U39851-3|AAZ32804.1| 563|Caenorhabditis elegans Hypothetical
protein C23G10.7c protein.
Length = 563
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 335 TYRNAMYHNKHLFKGKTVLDIGCGTGILSMFAAKAG 442
+Y N + ++ L K +DIGCG G+L K G
Sbjct: 229 SYINELVNSDLLPKPNKFVDIGCGNGLLVHLLNKIG 264
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 302 EEMLKDEVRTLTYRNAMYHNKHLFKGK 382
E + DEVRT TYR +++H + L GK
Sbjct: 49 EPTVVDEVRTGTYR-SLFHPEQLLSGK 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,794,202
Number of Sequences: 27780
Number of extensions: 276333
Number of successful extensions: 775
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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