Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_I09
(534 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 1.1
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 2.6
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 2.6
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 2.6
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 2.6
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 22 3.4
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 3.4
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 3.4
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 3.4
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 4.5
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 4.5
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 4.5
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 4.5
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 21 7.9
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 21 7.9
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.8 bits (49), Expect = 1.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 298 DAEMCIGIEIVISRSHLLS 242
D E+CIG +I++S LLS
Sbjct: 1238 DYEVCIGSQIMVSPETLLS 1256
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 2.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 435 FAANMERIPVPQPMSNTVFP 376
+ N+E+IPVP P+ FP
Sbjct: 120 YIINIEQIPVPVPVYYGNFP 139
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 2.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 435 FAANMERIPVPQPMSNTVFP 376
+ N+E+IPVP P+ FP
Sbjct: 120 YIINIEQIPVPVPVYYGNFP 139
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 2.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 435 FAANMERIPVPQPMSNTVFP 376
+ N+E+IPVP P+ FP
Sbjct: 120 YIINIEQIPVPVPVYYGNFP 139
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.6 bits (46), Expect = 2.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 435 FAANMERIPVPQPMSNTVFP 376
+ N+E+IPVP P+ FP
Sbjct: 345 YIINIEQIPVPVPVYYGNFP 364
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 22.2 bits (45), Expect = 3.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 375 KEKQY*TLAVEREFSPCL 428
+EKQY T+A EFS L
Sbjct: 29 REKQYLTIAERAEFSSSL 46
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.2 bits (45), Expect = 3.4
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +3
Query: 24 KTISSIYRKRNCLTCDSYSFIS*IAFQ 104
+TI + R+R+ L CD Y ++++
Sbjct: 372 ETIIDVSRRRSSLICDVYGVNESVSYE 398
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.2 bits (45), Expect = 3.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 435 FAANMERIPVPQPMSNTVFP 376
+ N+E+IPVP P+ FP
Sbjct: 109 YIINIEQIPVPVPIYCGNFP 128
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 3.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 435 FAANMERIPVPQPMSNTVFP 376
+ N+E+IPVP P+ FP
Sbjct: 350 YIINIEQIPVPVPIYCGNFP 369
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 426 NMERIPVPQPMSNTVFP 376
N+E+IPVP P+ FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 426 NMERIPVPQPMSNTVFP 376
N+E+IPVP P+ FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 426 NMERIPVPQPMSNTVFP 376
N+E+IPVP P+ FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 426 NMERIPVPQPMSNTVFP 376
N+E+IPVP P+ FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 426 NMERIPVPQPMSNTVFP 376
N+E+IPVP P+ FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 426 NMERIPVPQPMSNTVFP 376
N+E+IPVP P+ FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 426 NMERIPVPQPMSNTVFP 376
N+E+IPVP P+ FP
Sbjct: 119 NIEQIPVPVPIYCGNFP 135
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 426 NMERIPVPQPMSNTVFP 376
N+E+IPVP P+ FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 426 NMERIPVPQPMSNTVFP 376
N+E+IPVP P+ FP
Sbjct: 340 NIEQIPVPVPIYCGNFP 356
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 426 NMERIPVPQPMSNTVFP 376
N+E+IPVP P+ FP
Sbjct: 342 NIEQIPVPVPVYCGNFP 358
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 21.0 bits (42), Expect = 7.9
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -3
Query: 265 ISRSHLLSSNVLVGTMFSDRRRRSRGAFLGDIHT 164
+ R L +S + R G FLGDI+T
Sbjct: 36 LERGELTNSGKMREYQLGQFLRERYGDFLGDIYT 69
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 21.0 bits (42), Expect = 7.9
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -3
Query: 265 ISRSHLLSSNVLVGTMFSDRRRRSRGAFLGDIHT 164
+ R L +S + R G FLGDI+T
Sbjct: 51 LERGELTNSGKMREYQLGQFLRERYGDFLGDIYT 84
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,161
Number of Sequences: 438
Number of extensions: 3808
Number of successful extensions: 28
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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