Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_I08
         (580 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    25   0.41 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   0.94 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   0.94 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   2.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   6.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   6.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   8.8  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = -1

Query: 556 NGLGTLLVEPIPDGVKGFSNGCRVTEDVAWVCAPRTRWTNDLLK 425
           N    LL    PDG+K  S+G    E V+    P T+  N   K
Sbjct: 54  NSKSPLLSCACPDGLKLLSDGLMCVEKVSTTIVPTTQEINKPFK 97


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +2

Query: 314 TYSIHLTVRRPLLDIHLPQRSS-R*PISRHP 403
           T  +H+ V  PLL +HL   +  R  +S HP
Sbjct: 328 TAPLHVEVTPPLLSVHLGGNAEFRCEVSTHP 358


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +2

Query: 314 TYSIHLTVRRPLLDIHLPQRSS-R*PISRHP 403
           T  +H+ V  PLL +HL   +  R  +S HP
Sbjct: 328 TAPLHVEVTPPLLSVHLGGNAEFRCEVSTHP 358


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 462 QTHATSSVTRQPFENPLTP 518
           +TH+ SSV   P ++P+ P
Sbjct: 280 KTHSDSSVVGSPRDSPIEP 298



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3

Query: 510 LTPSGIGSTSNVPSPLPL 563
           LTP      S VPSP PL
Sbjct: 435 LTPPSSNPVSPVPSPDPL 452


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +3

Query: 96  VYKYFLSYLQQFESL*KYYNASGIAYNKLR 185
           +YK  + Y   ++   K YN   I Y  L+
Sbjct: 421 IYKRIIDYYHSYKMHQKPYNKDEIIYPNLK 450


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +3

Query: 96  VYKYFLSYLQQFESL*KYYNASGIAYNKLR 185
           +YK  + Y   ++   K YN   I Y  L+
Sbjct: 421 IYKRIIDYYHSYKMHQKPYNKDEIIYPNLK 450


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 547 GTLLVEPIPDGVKGF 503
           GTL V+P  + VKGF
Sbjct: 394 GTLSVQPQANPVKGF 408


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,495
Number of Sequences: 438
Number of extensions: 3878
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)