Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_I06
(496 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 166 2e-41
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 166 2e-41
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 166 2e-41
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 160 8e-40
AE013599-3492|ABI31111.1| 945|Drosophila melanogaster CG3682-PC... 28 6.0
AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB... 28 6.0
AY437926-1|AAR24077.1| 924|Drosophila melanogaster AMO protein. 28 8.0
AY283154-1|AAQ18122.1| 924|Drosophila melanogaster polycystin-2... 28 8.0
AE014134-2193|AAF53183.2| 924|Drosophila melanogaster CG6504-PA... 28 8.0
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 166 bits (403), Expect = 2e-41
Identities = 75/90 (83%), Positives = 84/90 (93%)
Frame = +2
Query: 5 EEHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 184
++HLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV
Sbjct: 6 KKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIV 65
Query: 185 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKT 274
QRL+KVDGKVRTDPTYPAG+MDV+++EKT
Sbjct: 66 MQRLVKVDGKVRTDPTYPAGYMDVITLEKT 95
Score = 121 bits (292), Expect = 5e-28
Identities = 57/98 (58%), Positives = 68/98 (69%)
Frame = +3
Query: 201 KWTGKCGLTPRTRRDLWTLYPLRKQIELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVA 380
K GK P + L K E FRL+YDVKGRF IHRI+ EEAKYKLCKV++
Sbjct: 71 KVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQ 130
Query: 381 TGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNQ 494
G K VP+LVTHDGRT+RYPDPLI NDSVQ+DI++ +
Sbjct: 131 LGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGK 168
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 166 bits (403), Expect = 2e-41
Identities = 75/90 (83%), Positives = 84/90 (93%)
Frame = +2
Query: 5 EEHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 184
++HLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV
Sbjct: 6 KKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIV 65
Query: 185 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKT 274
QRL+KVDGKVRTDPTYPAG+MDV+++EKT
Sbjct: 66 MQRLVKVDGKVRTDPTYPAGYMDVITLEKT 95
Score = 121 bits (292), Expect = 5e-28
Identities = 57/98 (58%), Positives = 68/98 (69%)
Frame = +3
Query: 201 KWTGKCGLTPRTRRDLWTLYPLRKQIELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVA 380
K GK P + L K E FRL+YDVKGRF IHRI+ EEAKYKLCKV++
Sbjct: 71 KVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQ 130
Query: 381 TGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNQ 494
G K VP+LVTHDGRT+RYPDPLI NDSVQ+DI++ +
Sbjct: 131 LGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGK 168
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 166 bits (403), Expect = 2e-41
Identities = 75/90 (83%), Positives = 84/90 (93%)
Frame = +2
Query: 5 EEHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 184
++HLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV
Sbjct: 6 KKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIV 65
Query: 185 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKT 274
QRL+KVDGKVRTDPTYPAG+MDV+++EKT
Sbjct: 66 MQRLVKVDGKVRTDPTYPAGYMDVITLEKT 95
Score = 121 bits (292), Expect = 5e-28
Identities = 57/98 (58%), Positives = 68/98 (69%)
Frame = +3
Query: 201 KWTGKCGLTPRTRRDLWTLYPLRKQIELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVA 380
K GK P + L K E FRL+YDVKGRF IHRI+ EEAKYKLCKV++
Sbjct: 71 KVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQ 130
Query: 381 TGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNQ 494
G K VP+LVTHDGRT+RYPDPLI NDSVQ+DI++ +
Sbjct: 131 LGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGK 168
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 160 bits (389), Expect = 8e-40
Identities = 73/90 (81%), Positives = 82/90 (91%)
Frame = +2
Query: 5 EEHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 184
++HLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYAL G EV KIV
Sbjct: 6 KKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAEVTKIV 65
Query: 185 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKT 274
QRL+KV GKVRTDPTYPAG+MDV+++EKT
Sbjct: 66 MQRLVKVYGKVRTDPTYPAGYMDVITLEKT 95
Score = 121 bits (291), Expect = 6e-28
Identities = 56/95 (58%), Positives = 67/95 (70%)
Frame = +3
Query: 210 GKCGLTPRTRRDLWTLYPLRKQIELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATGP 389
GK P + L K E FRL+YDVKGRF IHRI+ EEAKYKLCKV++ G
Sbjct: 74 GKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGA 133
Query: 390 KSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNQ 494
K VP+LVTHDGRT+RYPDPLI NDSVQ+DI++ +
Sbjct: 134 KGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGK 168
>AE013599-3492|ABI31111.1| 945|Drosophila melanogaster CG3682-PC,
isoform C protein.
Length = 945
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 362 QGAARRDRPQERAVPGDARRAHAPVPGPAH 451
+G+ RR Q+R PG P P PAH
Sbjct: 581 RGSPRRKDAQDRTTPGTEPHTTNPNPAPAH 610
>AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB,
isoform B protein.
Length = 737
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 35 KAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLK---YALTGNEVLKIVKQRLIKV 205
++W L + AP P G + E +R ++ ++TG E++++VKQ KV
Sbjct: 4 RSWNLLQYATEKAPIPLDG-YTAEEAAEFKDSIRQKIVDDLKSMTGEELIELVKQNAAKV 62
Query: 206 -DGKVRTDPTYP 238
+ KV PT P
Sbjct: 63 EEEKVEIPPTEP 74
>AY437926-1|AAR24077.1| 924|Drosophila melanogaster AMO protein.
Length = 924
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 365 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLG 469
GA+ R P + PGD A P P PA + +G
Sbjct: 28 GASPRGTPTADSTPGDVTPARGPPPPPATKRVSIG 62
>AY283154-1|AAQ18122.1| 924|Drosophila melanogaster polycystin-2
protein.
Length = 924
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 365 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLG 469
GA+ R P + PGD A P P PA + +G
Sbjct: 28 GASPRGTPTADSTPGDVTPARGPPPPPATKRVSIG 62
>AE014134-2193|AAF53183.2| 924|Drosophila melanogaster CG6504-PA
protein.
Length = 924
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 365 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLG 469
GA+ R P + PGD A P P PA + +G
Sbjct: 28 GASPRGTPTADSTPGDVTPARGPPPPPATKRVSIG 62
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,466,816
Number of Sequences: 53049
Number of extensions: 507891
Number of successful extensions: 1465
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1465
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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