Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_I06
         (496 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   1.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   1.8  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    23   2.4  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    22   3.1  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    22   3.1  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 377 RDRPQERAVPGDARRAHAPVPGPAH 451
           R R +  A PG+ R  + P P P H
Sbjct: 115 RLRREPEAEPGNNRPVYIPQPRPPH 139



 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 377 RDRPQERAVPGDARRAHAPVPGPAH 451
           R R +  A PG+ R  + P P P H
Sbjct: 141 RLRREPEAEPGNNRPVYIPQPRPPH 165



 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 377 RDRPQERAVPGDARRAHAPVPGPAH 451
           R   + +A PG+ R  + P P P H
Sbjct: 61  RREAEPKAEPGNNRPIYIPQPRPPH 85



 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 377 RDRPQERAVPGDARRAHAPVPGPAH 451
           R   +  A PG+ R  + P P P H
Sbjct: 89  RREAESEAEPGNNRPVYIPQPRPPH 113



 Score = 21.8 bits (44), Expect = 4.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 374 RRDRPQERAVPGDARRAHAPVPGPAH 451
           RR+   E A PG+ R  + P P P H
Sbjct: 33  RREAKPE-AEPGNNRPIYIPQPRPPH 57


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 21/84 (25%), Positives = 35/84 (41%)
 Frame = +2

Query: 140 RLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTN*VIPFNI*CERKVH 319
           R K+ LTG   L   K RL+  +      P +P+  MD ++   T       + C  +  
Sbjct: 182 RTKHRLTGETRLSATKGRLVITEPVGSVRPKFPS--MDNINGLSTESKADLPLLCPAQGF 239

Query: 320 YPPYHT*RSQVQAVQGAARRDRPQ 391
             P H      + ++G++RR   Q
Sbjct: 240 PVPVH---RWYKFIEGSSRRQPVQ 260


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 344 SQVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAH 451
           SQ +      RR+   E A PG+ R  + P P P H
Sbjct: 106 SQPRPPHPRLRREAEPE-AEPGNNRPVYIPQPRPPH 140



 Score = 22.6 bits (46), Expect = 2.4
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 344 SQVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAH 451
           SQ +      RR+   E A PG+ R  + P P P H
Sbjct: 162 SQPRPPHPRLRREAEPE-AEPGNNRPVYIPQPRPPH 196



 Score = 22.2 bits (45), Expect = 3.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 374 RRDRPQERAVPGDARRAHAPVPGPAH 451
           RR+   E A PG+ R  + P P P H
Sbjct: 32  RREAKPE-AEPGNNRPVYIPQPRPPH 56



 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 377 RDRPQERAVPGDARRAHAPVPGPAH 451
           R   +  A PG+ R  + P P P H
Sbjct: 60  RREAEPEAEPGNNRPVYIPQPRPPH 84



 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 377 RDRPQERAVPGDARRAHAPVPGPAH 451
           R   +  A PG+ R  + P P P H
Sbjct: 200 RREAEPEAEPGNNRPVYIPQPRPPH 224



 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 377 RDRPQERAVPGDARRAHAPVPGPAH 451
           R   +  A PG+ R  + P P P H
Sbjct: 228 RREAEPEAEPGNNRPVYIPQPRPPH 252



 Score = 22.2 bits (45), Expect = 3.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 374 RRDRPQERAVPGDARRAHAPVPGPAH 451
           RR+   E A PG+ R  + P P P H
Sbjct: 256 RREAKPE-AKPGNNRPVYIPQPRPPH 280


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 377 RDRPQERAVPGDARRAHAPVPGPAH 451
           R   +  A PG+ R  + P P P H
Sbjct: 33  RREAEPEAEPGNNRPVYIPQPRPPH 57



 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 377 RDRPQERAVPGDARRAHAPVPGPAH 451
           R   +  A PG+ R  + P P P H
Sbjct: 61  RREAEPEAEPGNNRPVYIPQPRPPH 85



 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 377 RDRPQERAVPGDARRAHAPVPGPAH 451
           R   +  A PG+ R  + P P P H
Sbjct: 89  RREAEPEAEPGNNRPVYIPQPRPPH 113



 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 377 RDRPQERAVPGDARRAHAPVPGPAH 451
           R   +  A PG+ R  + P P P H
Sbjct: 117 RREAEPEAEPGNNRPVYIPQPRPPH 141


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 374 RRDRPQERAVPGDARRAHAPVPGPAH 451
           RR+   E A PG+ R  + P P P H
Sbjct: 4   RREAKPE-AEPGNNRPVYIPQPRPPH 28



 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 377 RDRPQERAVPGDARRAHAPVPGPAH 451
           R   +  A PG+ R  + P P P H
Sbjct: 32  RREAEPEAEPGNNRPVYIPQPRPPH 56



 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 377 RDRPQERAVPGDARRAHAPVPGPAH 451
           R   +  A PG+ R  + P P P H
Sbjct: 60  RREAEPEAEPGNNRPVYIPQPRPPH 84



 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 377 RDRPQERAVPGDARRAHAPVPGPAH 451
           R   +  A PG+ R  + P P P H
Sbjct: 88  RREAEPEAEPGNNRPVYIPQPRPPH 112



 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 377 RDRPQERAVPGDARRAHAPVPGPAH 451
           R   +  A PG+ R  + P P P H
Sbjct: 116 RREAEPEAEPGNNRPVYIPQPRPPH 140



 Score = 22.2 bits (45), Expect = 3.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 374 RRDRPQERAVPGDARRAHAPVPGPAH 451
           RR+   E A PG+ R  + P P P H
Sbjct: 144 RREAKPE-AEPGNNRPVYIPQPRPPH 168



 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 377 RDRPQERAVPGDARRAHAPVPGPAH 451
           R   +  A PG+ R  + P P P H
Sbjct: 172 RREAEPEAEPGNNRPVYIPQPRPPH 196


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,675
Number of Sequences: 438
Number of extensions: 3172
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)