Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_I03
         (417 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   1.0  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    23   1.8  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   4.2  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   4.2  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   4.2  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   4.2  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    21   7.4  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    21   7.4  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   7.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    20   9.7  

>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +1

Query: 64  YYCKVSSNCVVRVLQTRLSIYFNLKHLFTF*LHYQCI 174
           Y CK  +NC + +   R      LK   T  +  +C+
Sbjct: 221 YQCKYGNNCEIDMYMRRKCQECRLKKCLTVGMRPECV 257


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +1

Query: 64  YYCKVSSNCVVRVLQTRLSIYFNLKHLFTF*LHYQCI 174
           Y CK  +NC + +   R      LK   T  +  +C+
Sbjct: 18  YQCKYGNNCEIDMYMRRKCQECRLKKCLTVGMRPECM 54


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 312 MHMWMWFGYDLG 347
           +H W +F YD G
Sbjct: 34  LHEWKFFDYDFG 45


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 312 MHMWMWFGYDLG 347
           +H W +F YD G
Sbjct: 34  LHEWKFFDYDFG 45


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 312 MHMWMWFGYDLG 347
           +H W +F YD G
Sbjct: 34  LHEWKFFDYDFG 45


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 312 MHMWMWFGYDLG 347
           +H W +F YD G
Sbjct: 35  IHEWKYFDYDFG 46


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 404 PSESERPSRDNVESGKQEFTEVITEPH 324
           P + +R S+D    G+ E  +    PH
Sbjct: 253 PPQPDRTSKDQGTIGESEVFDTTRYPH 279


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 263 CTLLIASNRRIIFLFTNCPNDIARHQHH 180
           CT L  SN   +F+ T  P+ I  ++H+
Sbjct: 29  CTSLNLSNLFWLFVGTYFPSLIGANEHY 56


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 39  YAKKTIRIILLQSFFQLCRTCPTNSVINLFQS 134
           Y + T+    +  F ++C T     VIN+ Q+
Sbjct: 487 YPEVTMLFSDIVGFTEICSTATPMMVINMLQN 518


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 109 FVGHVRHSWKKLCNNMIRIVF 47
           F  HV H   +LC  +  +VF
Sbjct: 166 FTAHVTHPRHRLCVFVAGVVF 186


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,364
Number of Sequences: 438
Number of extensions: 2080
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)