Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_I02
         (444 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY226551-1|AAO47377.1|  476|Drosophila melanogaster pickpocket 2...    28   5.0  
AY226550-1|AAO47376.1|  502|Drosophila melanogaster pickpocket 2...    28   5.0  
AE014298-2578|AAX52503.1|  502|Drosophila melanogaster CG8527-PB...    28   5.0  
AE014298-2577|AAF48734.2|  477|Drosophila melanogaster CG8527-PA...    28   5.0  

>AY226551-1|AAO47377.1|  476|Drosophila melanogaster pickpocket 23
           short form protein.
          Length = 476

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
 Frame = +2

Query: 167 DQK*AKFCLPNT*TALYIYSNEK------STQINFNYPKYFLRIESTKKN 298
           D+K A F +PN+ + ++I+SNE+      + QI+++ P+  + +  +KKN
Sbjct: 239 DKKWALFFIPNSTSRIFIFSNEEYFGSDFNAQIDWSEPQ-LVEVRISKKN 287


>AY226550-1|AAO47376.1|  502|Drosophila melanogaster pickpocket 23
           long form protein.
          Length = 502

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
 Frame = +2

Query: 167 DQK*AKFCLPNT*TALYIYSNEK------STQINFNYPKYFLRIESTKKN 298
           D+K A F +PN+ + ++I+SNE+      + QI+++ P+  + +  +KKN
Sbjct: 239 DKKWALFFIPNSTSRIFIFSNEEYFGSDFNAQIDWSEPQ-LVEVRISKKN 287


>AE014298-2578|AAX52503.1|  502|Drosophila melanogaster CG8527-PB,
           isoform B protein.
          Length = 502

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
 Frame = +2

Query: 167 DQK*AKFCLPNT*TALYIYSNEK------STQINFNYPKYFLRIESTKKN 298
           D+K A F +PN+ + ++I+SNE+      + QI+++ P+  + +  +KKN
Sbjct: 239 DKKWALFFIPNSTSRIFIFSNEEYFGSDFNAQIDWSEPQ-LVEVRISKKN 287


>AE014298-2577|AAF48734.2|  477|Drosophila melanogaster CG8527-PA,
           isoform A protein.
          Length = 477

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
 Frame = +2

Query: 167 DQK*AKFCLPNT*TALYIYSNEK------STQINFNYPKYFLRIESTKKN 298
           D+K A F +PN+ + ++I+SNE+      + QI+++ P+  + +  +KKN
Sbjct: 239 DKKWALFFIPNSTSRIFIFSNEEYFGSDFNAQIDWSEPQ-LVEVRISKKN 287


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,083,588
Number of Sequences: 53049
Number of extensions: 264691
Number of successful extensions: 396
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)