Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_I01
         (446 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   3.5  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   6.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   8.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   8.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   8.1  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 227 RSNPEDCQKFRQSFR 183
           R+N ED ++FRQ  R
Sbjct: 481 RNNKEDSEEFRQRLR 495


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 250 YKSEKFQRRAAVLYRSREIVTSKKVFATTTW 342
           Y S+  +RRAAVL     I +S   F    W
Sbjct: 154 YPSKMSRRRAAVLIAIVWICSSAISFPAIVW 184


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 269 KDGQQFYIDPAKLLPLKRFLPQ 334
           K+   + ID AK LPL + LP+
Sbjct: 491 KNAGIWMIDFAKTLPLPQHLPR 512


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 269 KDGQQFYIDPAKLLPLKRFLPQ 334
           K+   + ID AK LPL + LP+
Sbjct: 406 KNAGIWMIDFAKTLPLPQHLPR 427


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 269 KDGQQFYIDPAKLLPLKRFLPQ 334
           K+   + ID AK LPL + LP+
Sbjct: 725 KNAGIWMIDFAKTLPLPQHLPR 746


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,416
Number of Sequences: 438
Number of extensions: 1973
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)