Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_H24
(594 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 394 e-112
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 382 e-108
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 287 6e-80
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 195 2e-52
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 120 1e-29
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 1.7
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 5.2
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 5.2
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 6.9
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 6.9
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 6.9
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 6.9
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 394 bits (969), Expect = e-112
Identities = 180/194 (92%), Positives = 186/194 (95%)
Frame = +1
Query: 10 AFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRL 189
AFVPISGWHGDNMLE S+KMPWFKGW VERKEGK EGKCLIEALDAILPP RPTDKALRL
Sbjct: 189 AFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKALRL 248
Query: 190 PLQDVYKIGGIGTVPVGRLETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNV 369
PLQDVYKIGGIGTVPVGR+ETG+LKPG VV FAPA +TTEVKSVEMHHEALQEAVPGDNV
Sbjct: 249 PLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNV 308
Query: 370 GFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHI 549
GFNVKNVSVKELRRGYVAGDSKNNPP+GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHI
Sbjct: 309 GFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHI 368
Query: 550 ACKFAEIKEKVDRR 591
ACKFA+IKEK DRR
Sbjct: 369 ACKFADIKEKCDRR 382
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 382 bits (941), Expect = e-108
Identities = 175/195 (89%), Positives = 184/195 (94%)
Frame = +1
Query: 10 AFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRL 189
AFVPISGWHGDNMLEPS K PW+KGW VERK+G A+GK LIEALDAILPP+RPTDKALRL
Sbjct: 189 AFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPPSRPTDKALRL 248
Query: 190 PLQDVYKIGGIGTVPVGRLETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNV 369
PLQDVYKIGGIGTVPVGR+ETGILKPG +V FAPA +TTEVKSVEMHHEAL EA+PGDNV
Sbjct: 249 PLQDVYKIGGIGTVPVGRVETGILKPGMLVTFAPAALTTEVKSVEMHHEALTEALPGDNV 308
Query: 370 GFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHI 549
GFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHI
Sbjct: 309 GFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHI 368
Query: 550 ACKFAEIKEKVDRRT 594
ACKFAEIKEK DRRT
Sbjct: 369 ACKFAEIKEKCDRRT 383
Score = 21.4 bits (43), Expect = 6.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 365 LSPGTASCRASWCISTDLTSVVMLAGAKTTTVPG 264
L PG A ++T++ SV M A T +PG
Sbjct: 272 LKPGMLVTFAPAALTTEVKSVEMHHEALTEALPG 305
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 287 bits (704), Expect = 6e-80
Identities = 132/143 (92%), Positives = 136/143 (95%)
Frame = +1
Query: 10 AFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRL 189
AFVPISGWHGDNMLE S+KMPWFKGW VERKEGK EGKCLIEALDAILPP RPTDKALRL
Sbjct: 132 AFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKALRL 191
Query: 190 PLQDVYKIGGIGTVPVGRLETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNV 369
PLQDVYKIGGIGTVPVGR+ETG+LKPG VV FAPA +TTEVKSVEMHHEALQEAVPGDNV
Sbjct: 192 PLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNV 251
Query: 370 GFNVKNVSVKELRRGYVAGDSKN 438
GFNVKNVSVKELRRGYVAGDSKN
Sbjct: 252 GFNVKNVSVKELRRGYVAGDSKN 274
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 195 bits (476), Expect = 2e-52
Identities = 89/94 (94%), Positives = 91/94 (96%)
Frame = +1
Query: 313 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNH 492
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 493 PGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRT 594
PGQISNGYTPVLDCHTAHIACKFAEIKEK DRRT
Sbjct: 61 PGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRT 94
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 120 bits (289), Expect = 1e-29
Identities = 52/57 (91%), Positives = 53/57 (92%)
Frame = +1
Query: 10 AFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKA 180
AFVPISGWHGDNMLE S+KMPWFKGW VERKEGK EGKCLIEALDAILPP RPTDKA
Sbjct: 116 AFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKA 172
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 1.3
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 435 KQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSP 545
K TQ S + + + P S +R HT G+P P
Sbjct: 1048 KTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQP 1084
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/39 (23%), Positives = 20/39 (51%)
Frame = -2
Query: 326 ISTDLTSVVMLAGAKTTTVPGFRIPVSSLPTGTVPIPPI 210
+ T++T+ + ++ G +P++SLP + I I
Sbjct: 831 VVTNVTTTINTPTTSVISMSGTTVPITSLPASSTSINSI 869
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 5.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 391 SVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 498
S ++LR ++A + + P+G Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.8 bits (44), Expect = 5.2
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 89 WLSVKKERLKVNALLRPSTPSFRLLAPLTRLSVF 190
W++ E+ K RP LL L RLS++
Sbjct: 3 WINRDGEKWKGKMSQRPLARMLALLVSLHRLSIY 36
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 6.9
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +2
Query: 362 TMLVSTSKTYLSRNCAVVTLQEIRKTTHPGELQTSQRKSLC 484
++ V TS + L + + + R HP EL+ S C
Sbjct: 402 SLFVETSASELVESSVLFPSLDSRDELHPRELEAVNLGSAC 442
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 110 RLKVNALLRPSTPSFR 157
RL +N +LRP P F+
Sbjct: 274 RLLMNDILRPYVPEFK 289
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 110 RLKVNALLRPSTPSFR 157
RL +N +LRP P F+
Sbjct: 189 RLLMNDILRPYVPEFK 204
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 110 RLKVNALLRPSTPSFR 157
RL +N +LRP P F+
Sbjct: 508 RLLMNDILRPYVPEFK 523
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.317 0.137 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,153
Number of Sequences: 438
Number of extensions: 3990
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -