Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_H21
         (619 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.     131   5e-33
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.         113   1e-27
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      38   6e-05
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              25   0.45 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   3.2  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    22   4.2  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    22   4.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   5.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   5.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.3  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.6  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   9.6  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score =  131 bits (317), Expect = 5e-33
 Identities = 58/116 (50%), Positives = 82/116 (70%)
 Frame = +2

Query: 140 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEM 319
           M   + F L WNN+ +++++ F  L    D VDVTLA +GR L+AH++VLS CSPYF+E+
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFREL 60

Query: 320 FKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLT 487
            K  P +HP++ L+DV+ S L  L++F+Y GEVNV Q  L+SF+ TAE L+V GLT
Sbjct: 61  LKSTPCKHPVIVLQDVAFSDLHALVEFIYHGEVNVHQRSLSSFLKTAEVLRVSGLT 116


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score =  113 bits (273), Expect = 1e-27
 Identities = 52/112 (46%), Positives = 78/112 (69%), Gaps = 1/112 (0%)
 Frame = +2

Query: 152 EQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN 331
           + + L WNN+ +NM++ FH LL     VDVTLA     L+AHK+VLS CS YFQ++   N
Sbjct: 9   QHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSN 68

Query: 332 PTQHP-IVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 484
           P +HP I+  +DV  + L+ +++F+Y+GE++V Q EL S + TA+QL++KGL
Sbjct: 69  PCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGL 120


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 38.3 bits (85), Expect = 6e-05
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 140 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 256
           M   + F L WNN+ +++++ F  L    D VDVTLA E
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACE 39


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 389 LLQFMYQGEVNVKQEELASFIS-TAEQLQVKGLTGNQNEE 505
           ++  +Y G VNV+ E + S++    ++  V    GN NE+
Sbjct: 43  IIDEVYNGNVNVEDENVQSYVECMMKKFNVVDENGNFNEK 82


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 507 LSSF*FPVKPFT*SCSAVLINDANSSCLTLTSP 409
           LSS      P T + S ++ N  NS+C    SP
Sbjct: 323 LSSSTTTTSPMTSTKSTIVRNHLNSTCSVTNSP 355


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -3

Query: 305 KVNILIKLIYVPVTICLRQPMLRLLNLHATAGHES-LLTYSRGNCSNIMR 159
           +V +L+++ ++   I   Q    +++       E   L+Y RGN +N++R
Sbjct: 33  RVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIR 82


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -3

Query: 305 KVNILIKLIYVPVTICLRQPMLRLLNLHATAGHES-LLTYSRGNCSNIMR 159
           +V +L+++ ++   I   Q    +++       E   L+Y RGN +N++R
Sbjct: 33  RVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIR 82


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = -2

Query: 570 CLCCDDL-GPG 541
           C CCD+L GPG
Sbjct: 13  CWCCDNLGGPG 23


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 606 VSKSVSNLVITDCLCCDDLGPGLDVGF 526
           +S + S      CL CD++   LD  F
Sbjct: 316 ISSTPSQASSCSCLDCDEIRESLDTQF 342


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/24 (29%), Positives = 17/24 (70%)
 Frame = -3

Query: 536 TSALVWMAWNFLHFDSRLNLSLEV 465
           T+ ++W+A+  L+F +  N++L +
Sbjct: 856 TTCVIWLAFVPLYFGTGNNVALRI 879


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +2

Query: 158 FSLCWNNFHANMSAGFHGLLSRGDLVDVTL 247
           F +CW  FHA      +   S+    DV +
Sbjct: 294 FFICWAPFHAQRLLAVYAQNSKDKPEDVLI 323


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +3

Query: 126 QSPPSWRRTNNSHYVGTIST 185
           ++P +      +HY+GT++T
Sbjct: 160 ETPKNTSAVRYTHYIGTLAT 179


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,586
Number of Sequences: 438
Number of extensions: 3611
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)