Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_H19
(601 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 216 2e-56
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 216 2e-56
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 216 2e-56
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 216 2e-56
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 216 2e-56
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 46 5e-05
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 46 5e-05
M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal degene... 32 0.52
BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p pro... 32 0.52
AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA... 32 0.52
AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD... 32 0.52
AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC... 32 0.52
AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB... 32 0.52
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 32 0.69
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 32 0.69
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 32 0.69
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 216 bits (527), Expect = 2e-56
Identities = 103/147 (70%), Positives = 117/147 (79%)
Frame = +2
Query: 161 NPLFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 340
N LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 341 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVE 520
KTTA LFK+LEKYRPE+ D P K+P+ + AGTNTVTKL+E
Sbjct: 94 KTTAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 521 KKKAQLVVIAHDVDPIELVLFLPALCR 601
+KKAQLVVIAHDVDP+ELVLFLPALCR
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCR 180
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 216 bits (527), Expect = 2e-56
Identities = 103/147 (70%), Positives = 117/147 (79%)
Frame = +2
Query: 161 NPLFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 340
N LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 341 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVE 520
KTTA LFK+LEKYRPE+ D P K+P+ + AGTNTVTKL+E
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 521 KKKAQLVVIAHDVDPIELVLFLPALCR 601
+KKAQLVVIAHDVDP+ELVLFLPALCR
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCR 180
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 216 bits (527), Expect = 2e-56
Identities = 103/147 (70%), Positives = 117/147 (79%)
Frame = +2
Query: 161 NPLFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 340
N LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 341 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVE 520
KTTA LFK+LEKYRPE+ D P K+P+ + AGTNTVTKL+E
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 521 KKKAQLVVIAHDVDPIELVLFLPALCR 601
+KKAQLVVIAHDVDP+ELVLFLPALCR
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCR 180
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 216 bits (527), Expect = 2e-56
Identities = 103/147 (70%), Positives = 117/147 (79%)
Frame = +2
Query: 161 NPLFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 340
N LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 341 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVE 520
KTTA LFK+LEKYRPE+ D P K+P+ + AGTNTVTKL+E
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 521 KKKAQLVVIAHDVDPIELVLFLPALCR 601
+KKAQLVVIAHDVDP+ELVLFLPALCR
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCR 180
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 216 bits (527), Expect = 2e-56
Identities = 103/147 (70%), Positives = 117/147 (79%)
Frame = +2
Query: 161 NPLFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 340
N LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLD
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 341 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVE 520
KTTA LFK+LEKYRPE+ D P K+P+ + AGTNTVTKL+E
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 521 KKKAQLVVIAHDVDPIELVLFLPALCR 601
+KKAQLVVIAHDVDP+ELVLFLPALCR
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCR 180
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 45.6 bits (103), Expect = 5e-05
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +2
Query: 476 NTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALC 598
N LR G N TK + + A +VV+A D +PIE++L LP LC
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLC 72
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 45.6 bits (103), Expect = 5e-05
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +2
Query: 476 NTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALC 598
N LR G N TK + + A +VV+A D +PIE++L LP LC
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLC 72
>M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal
degeneration C protein protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.52
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 470 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 571
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p
protein.
Length = 603
Score = 32.3 bits (70), Expect = 0.52
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 470 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 571
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592
>AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA,
isoform A protein.
Length = 603
Score = 32.3 bits (70), Expect = 0.52
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 470 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 571
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592
>AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD,
isoform D protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.52
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 470 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 571
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC,
isoform C protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.52
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 470 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 571
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB,
isoform B protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.52
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 470 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 571
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 467 KRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALC 598
K LR G V + K + + + A DV P++++ LPA+C
Sbjct: 62 KHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVC 105
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 467 KRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALC 598
K LR G V + K + + + A DV P++++ LPA+C
Sbjct: 62 KHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVC 105
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 467 KRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALC 598
K LR G V + K + + + A DV P++++ LPA+C
Sbjct: 62 KHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVC 105
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,594,608
Number of Sequences: 53049
Number of extensions: 458144
Number of successful extensions: 1073
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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