Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_H18
(487 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.3
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 21 7.0
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.2
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 9.2
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 9.2
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 9.2
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 9.2
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 9.2
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 9.2
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 9.2
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 9.2
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.2
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.6 bits (46), Expect = 2.3
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 86 HGSRSSQGHQYNESQREMHIAGRLSPP 6
+GSR S G + S R + ++G PP
Sbjct: 1834 YGSRGSVGRRSVGSARNIPVSGSPEPP 1860
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.0 bits (42), Expect = 7.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 118 LYNPQLMILYS*LHSTTGRTLTP 186
LY PQ M + L TGR++ P
Sbjct: 369 LYQPQGMNILGDLIEGTGRSVNP 391
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 419 NYSSCLKHRYNK 454
NY++ KH YNK
Sbjct: 97 NYNNYNKHNYNK 108
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 419 NYSSCLKHRYNK 454
NY++ KH YNK
Sbjct: 97 NYNNYNKHNYNK 108
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 419 NYSSCLKHRYNK 454
NY++ KH YNK
Sbjct: 97 NYNNYNKHNYNK 108
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 419 NYSSCLKHRYNK 454
NY++ KH YNK
Sbjct: 97 NYNNYNKHNYNK 108
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 419 NYSSCLKHRYNK 454
NY++ KH YNK
Sbjct: 97 NYNNYNKHNYNK 108
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 419 NYSSCLKHRYNK 454
NY++ KH YNK
Sbjct: 97 NYNNYNKHNYNK 108
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 419 NYSSCLKHRYNK 454
NY++ KH YNK
Sbjct: 97 NYNNYNKHNYNK 108
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 419 NYSSCLKHRYNK 454
NY++ KH YNK
Sbjct: 97 NYNNYNKHNYNK 108
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 419 NYSSCLKHRYNK 454
NY++ KH YNK
Sbjct: 97 NYNNYNKHNYNK 108
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 9.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 419 NYSSCLKHRYNK 454
NY++ KH YNK
Sbjct: 330 NYNNYNKHNYNK 341
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 9.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 419 NYSSCLKHRYNK 454
NY++ KH YNK
Sbjct: 330 NYNNYNKHNYNK 341
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,321
Number of Sequences: 438
Number of extensions: 2281
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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