Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_H16
(332 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|c... 27 0.75
SPBC19F8.07 |crk1|mop1, mcs6|cyclin-dependent kinase activating ... 27 0.75
SPAC1F5.09c |shk2|pak2|PAK-related kinase Shk2 |Schizosaccharomy... 26 1.7
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 26 1.7
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 26 1.7
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 25 2.3
SPAC22E12.14c |sck2||serine/threonine protein kinase Sck2|Schizo... 25 2.3
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 25 3.0
SPCC645.10 |||ATP|Schizosaccharomyces pombe|chr 3|||Manual 25 3.0
SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase Cdc2|Sch... 25 4.0
SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomy... 24 5.3
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 24 5.3
SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr 1|... 24 5.3
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 24 5.3
SPBC244.02c |||U3 snoRNP-associated protein Utp6 |Schizosaccharo... 24 7.0
SPBC12C2.01c ||SPBC17F3.03c|sequence orphan|Schizosaccharomyces ... 24 7.0
SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat protei... 24 7.0
SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase I|Schizosacchar... 24 7.0
SPBC25D12.05 |trm1||N2,N2-dimethylguanosine tRNA methyltransfera... 24 7.0
SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 23 9.2
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 23 9.2
SPAC6G9.02c |nop9||RNA-binding protein Nop9|Schizosaccharomyces ... 23 9.2
SPAC6F12.05c |tnr3||thiamine diphosphokinase Tnr3 |Schizosacchar... 23 9.2
SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 23 9.2
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 23 9.2
>SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 488
Score = 27.1 bits (57), Expect = 0.75
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +2
Query: 50 QTDAILFDECYPDTVLKNCHKIGEGVYGEVFLWRDRDGRARVMKIVPIAGHVKVNGECQK 229
Q DA+ F + + KIGE Y EV+ + D V K++P +G+ Q
Sbjct: 142 QEDALPFSQFVKSQTFE-IQKIGEASYSEVYQASNADDVPVVWKVIPFG----EDGQAQ- 195
Query: 230 DFHEIISEIVIA 265
+ ++++E+ I+
Sbjct: 196 -YADVLNEVQIS 206
>SPBC19F8.07 |crk1|mop1, mcs6|cyclin-dependent kinase activating
kinase Crk1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 335
Score = 27.1 bits (57), Expect = 0.75
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 110 KIGEGVYGEVFLWRDRDGRARV 175
K+GEG Y VFL R ++ RV
Sbjct: 16 KVGEGTYAVVFLGRQKETNRRV 37
>SPAC1F5.09c |shk2|pak2|PAK-related kinase Shk2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 589
Score = 25.8 bits (54), Expect = 1.7
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 107 HKIGEGVYGEVFLWRDRDGRARVMKIVPIAGHVKVNGECQKDFHEIISEIVIAME 271
HK+G+G G V+L + G+ + I ++ +CQ I++EI + E
Sbjct: 313 HKLGQGASGSVYLAKVVGGKQ--LGIFDSVAIKSIDLQCQTRKELILNEITVMRE 365
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 25.8 bits (54), Expect = 1.7
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +2
Query: 110 KIGEGVYGEVF-LWRDRDGRARVMK 181
K+GEG +GEV+ R +DG+ +K
Sbjct: 41 KLGEGTFGEVYKSQRRKDGKVYALK 65
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 25.8 bits (54), Expect = 1.7
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 65 LFDECYPDTVLKNCHKIGEGVYGEVF 142
++ YP + +IGEG YG+V+
Sbjct: 267 IYTYTYPKPAYEKIDQIGEGTYGKVY 292
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 25.4 bits (53), Expect = 2.3
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = -2
Query: 265 SNHNLGYDLMEVLLAFSIDFYMTCYRNNFHHSSTAIPVTPEKHFSINTFPNLVAVFQHS 89
S Y+ E S+ + + H S++++P+TP + S T + V Q S
Sbjct: 446 STFTSSYEHSEPFKVSSVPLTSNNFSSISHSSASSLPITPSSYLSNTTLHSSVQSSQSS 504
>SPAC22E12.14c |sck2||serine/threonine protein kinase
Sck2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 646
Score = 25.4 bits (53), Expect = 2.3
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 113 IGEGVYGEVFLWRDRDGRARVMKIVPIAGHVKVNGECQKDFHEIISEIVIAMELSALRAP 292
IG+G +G+V+L R +D RV + ++ V V +K+ + E I ++ SA +P
Sbjct: 272 IGKGTFGQVYLVRKKD-TERVYAMKVLSKKVIVR---RKEVAHTVGERDILVQTSAADSP 327
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 25.0 bits (52), Expect = 3.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 26 DYVLRRCNQTDAILFDE 76
DYVL+ C Q + L DE
Sbjct: 224 DYVLKHCEQFEGFLLDE 240
>SPCC645.10 |||ATP|Schizosaccharomyces pombe|chr 3|||Manual
Length = 484
Score = 25.0 bits (52), Expect = 3.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 65 LFDECYPDTVLKNCHKIG 118
+FDE DT KNC IG
Sbjct: 360 IFDELVNDTSTKNCSSIG 377
>SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase
Cdc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 24.6 bits (51), Expect = 4.0
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 110 KIGEGVYGEVFLWRDR-DGRARVMK 181
KIGEG YG V+ R + GR MK
Sbjct: 9 KIGEGTYGVVYKARHKLSGRIVAMK 33
>SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 607
Score = 24.2 bits (50), Expect = 5.3
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 110 KIGEGVYGEVFLWRDRDGRARV-MKIV 187
++G+G YG V+L R RD + V +KI+
Sbjct: 213 QVGQGGYGSVWLARKRDTKEIVALKIM 239
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 24.2 bits (50), Expect = 5.3
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +2
Query: 137 VFLWRDRDGRARVMKIVPIAGHVKVNG--ECQKDFHEIISEIVIAMELSALRAPIADL 304
+F W+ ++ PI+GH+ ++G + Q E+ + + PI DL
Sbjct: 259 IFTWKGHTKGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDL 316
>SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 785
Score = 24.2 bits (50), Expect = 5.3
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 53 TDAILFDECYPDTVLKNCHKIGEGVYGEV 139
T + F+E Y + + HK GE +Y V
Sbjct: 41 TSQLSFEELYRNAYILVLHKYGEKLYNHV 69
>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3131
Score = 24.2 bits (50), Expect = 5.3
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +2
Query: 26 DYVLRRCNQTDAILFDECYPDTVLKNCHKIGEGVYGE 136
++ + CN+ F E T+ K C G G+Y +
Sbjct: 180 EFSIESCNEEWTSTFVETESQTIYKLCSLRGFGIYSD 216
>SPBC244.02c |||U3 snoRNP-associated protein Utp6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 488
Score = 23.8 bits (49), Expect = 7.0
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 38 RRCNQTDAI-LFDECYPDTVLKNCHKIGEGVYGEVFLWRDRDGRARVMKIVPIAGHVKV 211
+R N T I + D P VL + +G+V LW D A+ +K V I G + V
Sbjct: 73 KRLNITGKITISDYAGPRKVLFLFLRATNKFFGDVTLWLDYIHYAQKIKAVNIVGKICV 131
>SPBC12C2.01c ||SPBC17F3.03c|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 318
Score = 23.8 bits (49), Expect = 7.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 175 HSSTAIPVTPEKHFSINTFPNLV 107
H +P TP+K +S+N F L+
Sbjct: 34 HFFIPLPNTPKKFYSVNAFSPLL 56
>SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 586
Score = 23.8 bits (49), Expect = 7.0
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 146 RETLLHKHLPQSCGSF 99
RETLL K PQSCG F
Sbjct: 222 RETLL-KEGPQSCGRF 236
>SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase
I|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 23.8 bits (49), Expect = 7.0
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 79 LSRYCAEKLPQDWGRCLWRSV 141
+S C K Q WG+ W+ V
Sbjct: 215 ISHLCTRKNSQVWGKDAWKKV 235
>SPBC25D12.05 |trm1||N2,N2-dimethylguanosine tRNA
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 548
Score = 23.8 bits (49), Expect = 7.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 87 ILC*KTATRLGKVFMEKCFSGVTGMAV 167
I C +A G + EKCFS G ++
Sbjct: 225 ITCTDSAVLAGNAYPEKCFSNYGGSSL 251
>SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 843
Score = 23.4 bits (48), Expect = 9.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 30 TCCVDAIKQTRYFLMNVI 83
TCC+ I + YF+ NV+
Sbjct: 498 TCCIMTIIRINYFVDNVV 515
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 23.4 bits (48), Expect = 9.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 226 LAFSIDFYMTCYRNNFHHSSTA 161
LAFS F +T RN+F H+ A
Sbjct: 231 LAFSSPFEITATRNDFVHAFLA 252
>SPAC6G9.02c |nop9||RNA-binding protein Nop9|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 655
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +2
Query: 65 LFDECYPDTVLKNCHKIGEGVYGEVFLWRD 154
+++E P+ + HK+ V G++FL D
Sbjct: 194 MYNEIRPEVSMLMSHKLAVHVLGKIFLLLD 223
>SPAC6F12.05c |tnr3||thiamine diphosphokinase Tnr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 62 ILFDECYPDTVLKNCHKI 115
I+FD C T CHKI
Sbjct: 423 IVFDPCQNTTDFMKCHKI 440
>SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 313
Score = 23.4 bits (48), Expect = 9.2
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +1
Query: 7 GFSDSQGLRVASMQSN 54
GFS ++G+R++S+ SN
Sbjct: 45 GFSSTKGIRLSSINSN 60
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -3
Query: 177 ITRARPSLSRQRN 139
+T +RPSLSR+RN
Sbjct: 917 LTASRPSLSRRRN 929
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,450,916
Number of Sequences: 5004
Number of extensions: 29353
Number of successful extensions: 109
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 93942212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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