Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_H15
(549 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69150-1|CAB56794.1| 152|Homo sapiens ribosomal protein S18 pro... 235 6e-62
BC106063-1|AAI06064.1| 152|Homo sapiens ribosomal protein S18 p... 235 6e-62
BC101788-1|AAI01789.1| 152|Homo sapiens ribosomal protein S18 p... 235 6e-62
BC101786-1|AAI01787.1| 152|Homo sapiens ribosomal protein S18 p... 235 6e-62
AL844527-17|CAI41848.1| 152|Homo sapiens ribosomal protein S18 ... 235 6e-62
AL713971-5|CAI17656.1| 152|Homo sapiens ribosomal protein S18 p... 235 6e-62
AL662827-19|CAI17530.1| 152|Homo sapiens ribosomal protein S18 ... 235 6e-62
AL662820-19|CAI18127.1| 152|Homo sapiens ribosomal protein S18 ... 235 6e-62
AL645940-16|CAI18076.1| 152|Homo sapiens ribosomal protein S18 ... 235 6e-62
AL031228-3|CAA20231.1| 152|Homo sapiens ribosomal protein S18 p... 235 6e-62
AL031228-2|CAI95617.1| 82|Homo sapiens ribosomal protein S18 p... 118 1e-26
BC071678-1|AAH71678.1| 74|Homo sapiens LOC645958 protein protein. 92 1e-18
BX248408-4|CAM26259.1| 34|Homo sapiens ribosomal protein S18 p... 64 4e-10
AY536376-1|AAT66049.1| 34|Homo sapiens rhabdomyosarcoma antige... 64 4e-10
AF041462-1|AAB99794.1| 348|Homo sapiens I-FLICE isoform 5 protein. 31 2.7
>X69150-1|CAB56794.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 235 bits (576), Expect = 6e-62
Identities = 103/131 (78%), Positives = 124/131 (94%)
Frame = +1
Query: 46 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 225
MSLVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE T
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 226 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 405
E+EVE+++TIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAH
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 406 RGMRHYWGLRV 438
RG+RH+WGLRV
Sbjct: 121 RGLRHFWGLRV 131
>BC106063-1|AAI06064.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 235 bits (576), Expect = 6e-62
Identities = 103/131 (78%), Positives = 124/131 (94%)
Frame = +1
Query: 46 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 225
MSLVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE T
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 226 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 405
E+EVE+++TIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAH
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 406 RGMRHYWGLRV 438
RG+RH+WGLRV
Sbjct: 121 RGLRHFWGLRV 131
>BC101788-1|AAI01789.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 235 bits (576), Expect = 6e-62
Identities = 103/131 (78%), Positives = 124/131 (94%)
Frame = +1
Query: 46 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 225
MSLVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE T
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 226 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 405
E+EVE+++TIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAH
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 406 RGMRHYWGLRV 438
RG+RH+WGLRV
Sbjct: 121 RGLRHFWGLRV 131
>BC101786-1|AAI01787.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 235 bits (576), Expect = 6e-62
Identities = 103/131 (78%), Positives = 124/131 (94%)
Frame = +1
Query: 46 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 225
MSLVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE T
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 226 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 405
E+EVE+++TIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAH
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 406 RGMRHYWGLRV 438
RG+RH+WGLRV
Sbjct: 121 RGLRHFWGLRV 131
>AL844527-17|CAI41848.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 235 bits (576), Expect = 6e-62
Identities = 103/131 (78%), Positives = 124/131 (94%)
Frame = +1
Query: 46 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 225
MSLVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE T
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 226 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 405
E+EVE+++TIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAH
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 406 RGMRHYWGLRV 438
RG+RH+WGLRV
Sbjct: 121 RGLRHFWGLRV 131
>AL713971-5|CAI17656.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 235 bits (576), Expect = 6e-62
Identities = 103/131 (78%), Positives = 124/131 (94%)
Frame = +1
Query: 46 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 225
MSLVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE T
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 226 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 405
E+EVE+++TIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAH
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 406 RGMRHYWGLRV 438
RG+RH+WGLRV
Sbjct: 121 RGLRHFWGLRV 131
>AL662827-19|CAI17530.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 235 bits (576), Expect = 6e-62
Identities = 103/131 (78%), Positives = 124/131 (94%)
Frame = +1
Query: 46 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 225
MSLVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE T
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 226 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 405
E+EVE+++TIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAH
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 406 RGMRHYWGLRV 438
RG+RH+WGLRV
Sbjct: 121 RGLRHFWGLRV 131
>AL662820-19|CAI18127.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 235 bits (576), Expect = 6e-62
Identities = 103/131 (78%), Positives = 124/131 (94%)
Frame = +1
Query: 46 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 225
MSLVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE T
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 226 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 405
E+EVE+++TIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAH
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 406 RGMRHYWGLRV 438
RG+RH+WGLRV
Sbjct: 121 RGLRHFWGLRV 131
>AL645940-16|CAI18076.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 235 bits (576), Expect = 6e-62
Identities = 103/131 (78%), Positives = 124/131 (94%)
Frame = +1
Query: 46 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 225
MSLVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE T
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 226 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 405
E+EVE+++TIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAH
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 406 RGMRHYWGLRV 438
RG+RH+WGLRV
Sbjct: 121 RGLRHFWGLRV 131
>AL031228-3|CAA20231.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 235 bits (576), Expect = 6e-62
Identities = 103/131 (78%), Positives = 124/131 (94%)
Frame = +1
Query: 46 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 225
MSLVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE T
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 226 EEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 405
E+EVE+++TIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAH
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 406 RGMRHYWGLRV 438
RG+RH+WGLRV
Sbjct: 121 RGLRHFWGLRV 131
>AL031228-2|CAI95617.1| 82|Homo sapiens ribosomal protein S18
protein.
Length = 82
Score = 118 bits (285), Expect = 1e-26
Identities = 50/61 (81%), Positives = 57/61 (93%)
Frame = +1
Query: 256 MSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLR 435
M NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+WGLR
Sbjct: 1 MQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 60
Query: 436 V 438
V
Sbjct: 61 V 61
>BC071678-1|AAH71678.1| 74|Homo sapiens LOC645958 protein protein.
Length = 74
Score = 91.9 bits (218), Expect = 1e-18
Identities = 39/53 (73%), Positives = 47/53 (88%)
Frame = +1
Query: 280 IPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 438
+P WFLNRQKD+ DGKYSQ+ ++ LD+KL EDLERLKKIRA RG+RH+WGLRV
Sbjct: 1 MPAWFLNRQKDVKDGKYSQVLANGLDNKLCEDLERLKKIRARRGLRHFWGLRV 53
>BX248408-4|CAM26259.1| 34|Homo sapiens ribosomal protein S18
protein.
Length = 34
Score = 63.7 bits (148), Expect = 4e-10
Identities = 27/34 (79%), Positives = 33/34 (97%)
Frame = +1
Query: 46 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIK 147
MSLVIP+KFQHILR++NTNIDG+RK+ FA+TAIK
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIK 34
>AY536376-1|AAT66049.1| 34|Homo sapiens rhabdomyosarcoma antigen
MU-RMS-40.21 protein.
Length = 34
Score = 63.7 bits (148), Expect = 4e-10
Identities = 27/34 (79%), Positives = 33/34 (97%)
Frame = +1
Query: 46 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIK 147
MSLVIP+KFQHILR++NTNIDG+RK+ FA+TAIK
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIK 34
>AF041462-1|AAB99794.1| 348|Homo sapiens I-FLICE isoform 5 protein.
Length = 348
Score = 31.1 bits (67), Expect = 2.7
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +1
Query: 43 KMSLVIPDKFQHILRIMNT--NIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAG 216
K++LV PD+ + + + ID K K+ +++G G Y N++ L +
Sbjct: 44 KLNLVAPDQLDLLEKCLKNIHRIDLKTKIQKYKQSVQGAGTSYRNVLQAAIQKSLKDPSN 103
Query: 217 ECTEEEVEKIV 249
EE V+K +
Sbjct: 104 NFREEPVKKSI 114
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,638,983
Number of Sequences: 237096
Number of extensions: 1242574
Number of successful extensions: 3780
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3780
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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