Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_H14
         (622 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   0.60 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   0.79 
S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor prot...    24   1.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   2.4  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   2.4  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   5.5  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   9.7  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   9.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   9.7  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
 Frame = +1

Query: 49  INNVDDKQETPNSEKDIRAKLDMA-TKSRFERNWHNTLHFVHWCRYGETPQEARMRQVSE 225
           I  + D   T +   D    +++   KS     W    + VHW  + +T ++ R   V  
Sbjct: 420 IRKISDCSTTSSLSGDESDVVELQPVKSSKSSGWRKLRNIVHWTPFFQTYKKQRYPWVQL 479

Query: 226 SLKWGNI--GMNMGVMLVSQNCTREKA 300
           +   GN   G   G +L  + C +E+A
Sbjct: 480 AGHQGNFRAGPTPGTIL-KKLCPQEEA 505


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +1

Query: 259  GVMLVSQNCTREKAK-SV*VSQASGTSAGKYSCY 357
            G +L S +  R+  + S+ + +   T AG+YSCY
Sbjct: 1314 GAVLQSSDRLRQLPEGSLFIKEVDRTDAGEYSCY 1347


>S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor
           protein.
          Length = 85

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 153 IVPVPLEPGLSCHIQLSSDIFLAVGSL 73
           IV +  E GL  H++LSSD ++  G L
Sbjct: 59  IVGLFYEFGLITHVKLSSDWYMGQGKL 85


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = +1

Query: 145 WHNTLHFVHWCRYGETPQEARMRQVSESLKWGNI--GMNMGVMLVSQNCTREKA 300
           W    + VHW  + +T ++ R   V  +   GN   G   G +L  + C +E+A
Sbjct: 219 WRKLRNIVHWTPFFQTYKKQRYPWVQLAGHQGNFRAGPTPGTIL-KKLCPQEEA 271


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = +1

Query: 145 WHNTLHFVHWCRYGETPQEARMRQVSESLKWGNI--GMNMGVMLVSQNCTREKA 300
           W    + VHW  + +T ++ R   V  +   GN   G   G +L  + C +E+A
Sbjct: 134 WRKLRNIVHWTPFFQTYKKQRYPWVQLAGHQGNFRAGPTPGTIL-KKLCPQEEA 186


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -1

Query: 577 KKMIYFFTK*TYKVKRDSIRNSMITVGIENKIYKLYEIHKK 455
           K +IY F     K  +D      +++   N +YKL +  KK
Sbjct: 531 KAIIYGFNVNATKQIKDEANKKGVSLRFYNVVYKLIDNIKK 571


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 146 GTIPCISSIGAVMERLHKRLACDRLASRSN 235
           G + CI  +GAVM  L    A   LA  S+
Sbjct: 1   GVLRCIGDMGAVMTSLTLGPAGQVLAGSSS 30


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 319 QASGTSAGKYSCYAC 363
           +ASG   G YSC  C
Sbjct: 116 RASGKHYGVYSCEGC 130


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 319 QASGTSAGKYSCYAC 363
           +ASG   G YSC  C
Sbjct: 116 RASGKHYGVYSCEGC 130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,425
Number of Sequences: 438
Number of extensions: 4101
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)