Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_H06
         (437 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023856-5|CAC15865.2|  343|Caenorhabditis elegans Hypothetical ...    29   1.5  
U10414-11|AAA19078.1|  187|Caenorhabditis elegans Hypothetical p...    28   2.6  
U97401-1|AAB52466.2|  336|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z70782-11|CAA94848.1|  487|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z70781-9|CAA94837.1|  487|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U55365-8|AAA98573.2|  383|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U40947-1|AAC48068.1|  610|Caenorhabditis elegans Hypothetical pr...    27   7.9  
AF016446-8|AAC24168.2|  345|Caenorhabditis elegans Seven tm rece...    27   7.9  

>AL023856-5|CAC15865.2|  343|Caenorhabditis elegans Hypothetical
           protein Y94A7B.8 protein.
          Length = 343

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = -3

Query: 207 GNDKYTNATITSQTS--ILHCLSFLSICMQQMNM*NKNISSNYSLNFIHVENK 55
           GN  +TN    S T   +L  + F+ +   +MN   KNI S+ SLN +  + K
Sbjct: 188 GNSGWTNIRENSLTCFVLLEIIFFVVLIRVKMNRALKNIRSSLSLNTLETQKK 240


>U10414-11|AAA19078.1|  187|Caenorhabditis elegans Hypothetical
           protein F42A10.7 protein.
          Length = 187

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -3

Query: 414 PLILSYPVV--NWIINPTASYKEPSLILV*RIWK 319
           P+ LS P+V    I NPT++Y  P+L     IWK
Sbjct: 67  PIHLSQPIVVKTQINNPTSTYVSPNLRNTVNIWK 100


>U97401-1|AAB52466.2|  336|Caenorhabditis elegans Hypothetical
           protein F21A9.2 protein.
          Length = 336

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +3

Query: 63  LHV*SSVNNLKKYSCFTCSFAAYRLKG 143
           +H+ SS    K ++C  C + A+ ++G
Sbjct: 286 MHIRSSHQTTKTFTCLVCGYRAFSMRG 312


>Z70782-11|CAA94848.1|  487|Caenorhabditis elegans Hypothetical
           protein F57A8.7 protein.
          Length = 487

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +3

Query: 54  IYFLHV*SSVNNLKKYSCFTCSFAAYRLKGNSDNEE*KFGW*LWHWCIYHC 206
           +Y + V S + N + YS +  S  +Y  K ++   E +FGW +    + HC
Sbjct: 11  VYLMGVFSLIQNTQ-YSIYLTSMFSYLKKLDATATESQFGWIMATSSLGHC 60


>Z70781-9|CAA94837.1|  487|Caenorhabditis elegans Hypothetical
           protein F57A8.7 protein.
          Length = 487

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +3

Query: 54  IYFLHV*SSVNNLKKYSCFTCSFAAYRLKGNSDNEE*KFGW*LWHWCIYHC 206
           +Y + V S + N + YS +  S  +Y  K ++   E +FGW +    + HC
Sbjct: 11  VYLMGVFSLIQNTQ-YSIYLTSMFSYLKKLDATATESQFGWIMATSSLGHC 60


>U55365-8|AAA98573.2|  383|Caenorhabditis elegans Hypothetical
           protein C12D5.2 protein.
          Length = 383

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 178 YQPNFYSSLSEFPFNLYAANEHVKQEYFFKLFTEL 74
           Y PN   + S   +N    + H KQ  FF L T +
Sbjct: 170 YHPNHIFASSNLDYNFKTYSPHRKQWRFFNLLTSI 204


>U40947-1|AAC48068.1|  610|Caenorhabditis elegans Hypothetical
           protein R03E9.2 protein.
          Length = 610

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 99  ISSNYSLNFIHVENK*MNL 43
           ++S+Y LNFIHV N   NL
Sbjct: 58  VNSHYILNFIHVSNPATNL 76


>AF016446-8|AAC24168.2|  345|Caenorhabditis elegans Seven tm
           receptor protein 205 protein.
          Length = 345

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -1

Query: 221 ATVTRAMINTPMPQLPAKLLFFIV*VSF 138
           A VT+ +I   + QLPA +LF  V VSF
Sbjct: 249 ALVTQTLIPVILLQLPATILFLSVFVSF 276


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,930,011
Number of Sequences: 27780
Number of extensions: 190112
Number of successful extensions: 438
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)