Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_H04
(239 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 133 2e-32
AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like pro... 28 0.77
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 27 1.3
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 27 1.3
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 27 1.3
Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 26 4.1
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 26 4.1
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 26 4.1
Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z81119-8|CAB03340.1| 504|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z99942-8|CAC70091.2| 439|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z99942-2|CAB17072.1| 468|Caenorhabditis elegans Hypothetical pr... 25 9.5
AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein. 25 9.5
AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated... 25 9.5
AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated... 25 9.5
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 25 9.5
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 25 9.5
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 25 9.5
AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical ... 25 9.5
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 133 bits (321), Expect = 2e-32
Identities = 59/71 (83%), Positives = 62/71 (87%)
Frame = +2
Query: 26 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 205
MGRRPARCYRY KNKPYPKSRFCRGVPD KIRIFDLG KRA VD FP CVH++S+E E L
Sbjct: 1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHL 60
Query: 206 SSEALEAGRIC 238
SSEALEA RIC
Sbjct: 61 SSEALEAARIC 71
>AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like
protein 2 protein.
Length = 205
Score = 28.3 bits (60), Expect = 0.77
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 86 RFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGR 232
R C + K I D K+ A ++ + +++ EYEQ++S +AG+
Sbjct: 93 RACDFMSQLKTDISDADKQLAQLNAQAAALEMIASEYEQMASSVPDAGQ 141
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 104 AHPDKTEI*DTVYSYNIDNISLVGAPLCSPQS 9
AH +K I D + NI+ ISLVG PL + Q+
Sbjct: 812 AHSNKLNIGDQII--NINGISLVGLPLSAAQT 841
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 104 AHPDKTEI*DTVYSYNIDNISLVGAPLCSPQS 9
AH +K I D + NI+ ISLVG PL + Q+
Sbjct: 840 AHSNKLNIGDQII--NINGISLVGLPLSAAQT 869
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 104 AHPDKTEI*DTVYSYNIDNISLVGAPLCSPQS 9
AH +K I D + NI+ ISLVG PL + Q+
Sbjct: 812 AHSNKLNIGDQII--NINGISLVGLPLSAAQT 841
>Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical
protein ZK1053.4 protein.
Length = 667
Score = 26.2 bits (55), Expect = 3.1
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = -1
Query: 233 YGLLPAPQNSA--ARTHQTLSARIVGSHPLSLSFCPSRKYGSLGQAHPDKTEI*DTVYSY 60
Y L P PQ S +H + S LS +CPSR + P TV++Y
Sbjct: 233 YSLYPPPQPSQQFVHSHNFHQPKFDASSMLSTGYCPSRNVATFKVDKPY-----GTVFTY 287
Query: 59 NIDN 48
+ N
Sbjct: 288 DHQN 291
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 104 PDPKIRIFDLGKKRATVDDFPLCVHLV 184
P PKI IF L + +TVD L V ++
Sbjct: 25 PPPKISIFQLYRYTSTVDRLMLAVGII 51
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 104 PDPKIRIFDLGKKRATVDDFPLCVHLV 184
P PKI IF L + +TVD L V ++
Sbjct: 25 PPPKISIFQLYRYTSTVDRLMLAVGII 51
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 95 RGVPDPKIRIFDLGKKRATVDDF 163
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 95 RGVPDPKIRIFDLGKKRATVDDF 163
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 95 RGVPDPKIRIFDLGKKRATVDDF 163
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 95 RGVPDPKIRIFDLGKKRATVDDF 163
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 95 RGVPDPKIRIFDLGKKRATVDDF 163
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical
protein C30F2.2 protein.
Length = 203
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 38 PARCYRYCKNKPYPKSRFCRGVPDPKIRIF 127
PA CYR P P++ +GVP R+F
Sbjct: 166 PAVCYRTIYTLPPPENFAAQGVPSAFNRMF 195
>Z81119-8|CAB03340.1| 504|Caenorhabditis elegans Hypothetical
protein T10H4.10 protein.
Length = 504
Score = 25.0 bits (52), Expect = 7.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 96 GVCLTQRSVFSTWAK 140
G+C +R +F TWA+
Sbjct: 162 GICNKERKIFETWAR 176
>Z99942-8|CAC70091.2| 439|Caenorhabditis elegans Hypothetical
protein H13N06.3b protein.
Length = 439
Score = 24.6 bits (51), Expect = 9.5
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = +2
Query: 149 TVDDFPLCVHLVSDEYEQLSSEALEAGRI 235
+++DF C++ + + + +++E LE G I
Sbjct: 15 SIEDFKECLYQMQEARKSVTNEILETGHI 43
>Z99942-2|CAB17072.1| 468|Caenorhabditis elegans Hypothetical
protein H13N06.3a protein.
Length = 468
Score = 24.6 bits (51), Expect = 9.5
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = +2
Query: 149 TVDDFPLCVHLVSDEYEQLSSEALEAGRI 235
+++DF C++ + + + +++E LE G I
Sbjct: 44 SIEDFKECLYQMQEARKSVTNEILETGHI 72
>AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.
Length = 1338
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 29 GRRPARCYRYCKNKPYPKSRFCRGVPDPK 115
GRRPA Y Y + +P VP P+
Sbjct: 287 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 315
>AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated
protein 89, isoform c protein.
Length = 1393
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 29 GRRPARCYRYCKNKPYPKSRFCRGVPDPK 115
GRRPA Y Y + +P VP P+
Sbjct: 251 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 279
>AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated
protein 89, isoform d protein.
Length = 1396
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 29 GRRPARCYRYCKNKPYPKSRFCRGVPDPK 115
GRRPA Y Y + +P VP P+
Sbjct: 254 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 282
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 29 GRRPARCYRYCKNKPYPKSRFCRGVPDPK 115
GRRPA Y Y + +P VP P+
Sbjct: 6875 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 6903
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 29 GRRPARCYRYCKNKPYPKSRFCRGVPDPK 115
GRRPA Y Y + +P VP P+
Sbjct: 6299 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 6327
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 29 GRRPARCYRYCKNKPYPKSRFCRGVPDPK 115
GRRPA Y Y + +P VP P+
Sbjct: 6939 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 6967
>AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical
protein F12E12.5 protein.
Length = 330
Score = 24.6 bits (51), Expect = 9.5
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -2
Query: 151 CRSLFAQVENTDLWVRHT--PTKPRFRIRFILTISITSRWSAPHCVL 17
C A + NTD + T P +PRFR ++T T + HC +
Sbjct: 234 CEQNSATLPNTDQQLSPTLSPNEPRFRN--LITSEPTPSFECKHCTI 278
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,858,980
Number of Sequences: 27780
Number of extensions: 109001
Number of successful extensions: 292
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 292
length of database: 12,740,198
effective HSP length: 59
effective length of database: 11,101,178
effective search space used: 222023560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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