Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_H02
         (552 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015168-1|AAH15168.2|  293|Homo sapiens ELMO/CED-12 domain cont...    33   0.88 
AK126738-1|BAC86665.1|  125|Homo sapiens protein ( Homo sapiens ...    29   8.2  

>BC015168-1|AAH15168.2|  293|Homo sapiens ELMO/CED-12 domain
           containing 2 protein.
          Length = 293

 Score = 32.7 bits (71), Expect = 0.88
 Identities = 10/37 (27%), Positives = 23/37 (62%)
 Frame = +3

Query: 384 SLVIRDEVFNHLPALPTKDHVHVFFYKVLYNLSEYYF 494
           S  ++  ++N +P +PT +H H F+  ++Y   +++F
Sbjct: 221 SEALKFHLYNLVPGIPTMEHFHQFYCYLVYEFDKFWF 257


>AK126738-1|BAC86665.1|  125|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44784 fis, clone BRACE3037803. ).
          Length = 125

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 171 FTVFSHHYG*YSVCILLRCFKFFF 100
           F +F+HH   + VC+ L CF  FF
Sbjct: 5   FILFTHHKRCFFVCLFLFCFVLFF 28


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,205,222
Number of Sequences: 237096
Number of extensions: 1158998
Number of successful extensions: 1378
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)