Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_G23
(476 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC130474-1|AAI30475.1| 723|Homo sapiens tripartite motif-contai... 30 3.6
BC044814-1|AAH44814.1| 374|Homo sapiens coiled-coil domain cont... 30 4.8
AK095478-1|BAC04556.1| 374|Homo sapiens protein ( Homo sapiens ... 30 4.8
BC130472-1|AAI30473.1| 723|Homo sapiens tripartite motif-contai... 29 6.3
AK097416-1|BAC05042.1| 708|Homo sapiens protein ( Homo sapiens ... 29 6.3
AF521868-1|AAO14945.1| 723|Homo sapiens tripartite motif protei... 29 6.3
BC038596-1|AAH38596.1| 1937|Homo sapiens CHD4 protein protein. 29 8.3
BC033882-1|AAH33882.1| 309|Homo sapiens chromosome 17 open read... 29 8.3
AL022721-1|CAD92503.1| 472|Homo sapiens TEA domain family membe... 29 8.3
>BC130474-1|AAI30475.1| 723|Homo sapiens tripartite
motif-containing 42 protein.
Length = 723
Score = 30.3 bits (65), Expect = 3.6
Identities = 18/79 (22%), Positives = 38/79 (48%)
Frame = +1
Query: 70 ENIDVSNSNELDEKTHIIFLERLRALQAKAGIKTESTLSTQARTPVGDNRTLMDAMNENA 249
EN++VS E+++ ++ + ++ + E+ T + + L+D + E+
Sbjct: 399 ENLEVSRQKEIEKYVYVTTM-KVNEMDGLIAYSKEALKETGQVAFLQSAKILVDQI-EDG 456
Query: 250 LPRTHSIDPQLELHTTQAM 306
+ T+ DPQL LH+ M
Sbjct: 457 IQTTYRPDPQLRLHSINYM 475
>BC044814-1|AAH44814.1| 374|Homo sapiens coiled-coil domain
containing 89 protein.
Length = 374
Score = 29.9 bits (64), Expect = 4.8
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +1
Query: 49 YKHDYKPENIDVSNSNE-LDEKTHIIFLERLRALQAKAGIKTESTLSTQARTPVGDNRTL 225
+K +YK ENI + NE L + +F + L+ +AK + T+ +A T G+ TL
Sbjct: 139 FKDEYKSENIKLREENEKLRLENSSLFSQALKDEEAKV---LQLTVRCEALT--GELETL 193
Query: 226 MDAMNENALPRTHSIDPQLELHTTQAMSQKNE 321
+ ++A LEL + QA + E
Sbjct: 194 KERCAQDACQAQAREKELLELQSQQACTHTKE 225
>AK095478-1|BAC04556.1| 374|Homo sapiens protein ( Homo sapiens
cDNA FLJ38159 fis, clone DFNES2001404. ).
Length = 374
Score = 29.9 bits (64), Expect = 4.8
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +1
Query: 49 YKHDYKPENIDVSNSNE-LDEKTHIIFLERLRALQAKAGIKTESTLSTQARTPVGDNRTL 225
+K +YK ENI + NE L + +F + L+ +AK + T+ +A T G+ TL
Sbjct: 139 FKDEYKSENIKLREENEKLRLENSSLFSQALKDEEAKV---LQLTVRCEALT--GELETL 193
Query: 226 MDAMNENALPRTHSIDPQLELHTTQAMSQKNE 321
+ ++A LEL + QA + E
Sbjct: 194 KERCAQDACQAQAREKELLELQSQQACTHTKE 225
>BC130472-1|AAI30473.1| 723|Homo sapiens tripartite
motif-containing 42 protein.
Length = 723
Score = 29.5 bits (63), Expect = 6.3
Identities = 17/75 (22%), Positives = 37/75 (49%)
Frame = +1
Query: 70 ENIDVSNSNELDEKTHIIFLERLRALQAKAGIKTESTLSTQARTPVGDNRTLMDAMNENA 249
EN++VS E+++ ++ + ++ + E+ T + + L+D + E+
Sbjct: 399 ENLEVSRQKEIEKYVYVTTM-KVNEMDGLIAYSKEALKETGQVAFLQSAKILVDQI-EDG 456
Query: 250 LPRTHSIDPQLELHT 294
+ T+ DPQL LH+
Sbjct: 457 IQTTYRPDPQLRLHS 471
>AK097416-1|BAC05042.1| 708|Homo sapiens protein ( Homo sapiens
cDNA FLJ40097 fis, clone TESTI2004169. ).
Length = 708
Score = 29.5 bits (63), Expect = 6.3
Identities = 17/75 (22%), Positives = 37/75 (49%)
Frame = +1
Query: 70 ENIDVSNSNELDEKTHIIFLERLRALQAKAGIKTESTLSTQARTPVGDNRTLMDAMNENA 249
EN++VS E+++ ++ + ++ + E+ T + + L+D + E+
Sbjct: 399 ENLEVSRQKEIEKYVYVTTM-KVNEMDGLIAYSKEALKETGQVAFLQSAKILVDQI-EDG 456
Query: 250 LPRTHSIDPQLELHT 294
+ T+ DPQL LH+
Sbjct: 457 IQTTYRPDPQLRLHS 471
>AF521868-1|AAO14945.1| 723|Homo sapiens tripartite motif protein
42 protein.
Length = 723
Score = 29.5 bits (63), Expect = 6.3
Identities = 17/75 (22%), Positives = 37/75 (49%)
Frame = +1
Query: 70 ENIDVSNSNELDEKTHIIFLERLRALQAKAGIKTESTLSTQARTPVGDNRTLMDAMNENA 249
EN++VS E+++ ++ + ++ + E+ T + + L+D + E+
Sbjct: 399 ENLEVSRQKEIEKYVYVTTM-KVNEMDGLIAYSKEALKETGQVAFLQSAKILVDQI-EDG 456
Query: 250 LPRTHSIDPQLELHT 294
+ T+ DPQL LH+
Sbjct: 457 IQTTYRPDPQLRLHS 471
>BC038596-1|AAH38596.1| 1937|Homo sapiens CHD4 protein protein.
Length = 1937
Score = 29.1 bits (62), Expect = 8.3
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 175 STLSTQARTPVGDNRTLMDAMNENALPRTHSIDPQLELHTTQAMSQKNE 321
S L + + G MDA+ N+LP H DP+ +L T+ K +
Sbjct: 3 SGLGSPSPCSAGSEEEDMDALLNNSLPPPHPEDPEEDLSETETPKLKKK 51
>BC033882-1|AAH33882.1| 309|Homo sapiens chromosome 17 open reading
frame 83 protein.
Length = 309
Score = 29.1 bits (62), Expect = 8.3
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 162 YKNGIDPVYPGAYAGRR*PNPDGRHERERIAEDSQHRPATRVTYDPSDV 308
+KNG + P A A + P P I E S+HR + R+ YD D+
Sbjct: 219 HKNGGEGAVPEAEAAQYQPVPAPTLGPAVIPEFSRHRSSGRIVYDARDM 267
>AL022721-1|CAD92503.1| 472|Homo sapiens TEA domain family member 3
protein.
Length = 472
Score = 29.1 bits (62), Expect = 8.3
Identities = 16/66 (24%), Positives = 32/66 (48%)
Frame = +1
Query: 112 THIIFLERLRALQAKAGIKTESTLSTQARTPVGDNRTLMDAMNENALPRTHSIDPQLELH 291
+HI L R + + + GIK S L AR + ++ + AMN + + + ++ +
Sbjct: 108 SHIQVLARKKVREYQVGIKVSSHLQVLARRKSREIQSKLKAMNLDQVSKDKALQSMASMS 167
Query: 292 TTQAMS 309
+ Q +S
Sbjct: 168 SAQIVS 173
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.312 0.126 0.343
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,623,720
Number of Sequences: 237096
Number of extensions: 1064818
Number of successful extensions: 1827
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1827
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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