Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_G18
(462 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 31 0.11
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 30 0.20
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 29 0.26
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 29 0.26
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 28 0.60
SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc... 28 0.80
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 28 0.80
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 27 1.1
SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces po... 27 1.1
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An... 27 1.4
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 27 1.8
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 27 1.8
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 26 2.4
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 2.4
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 26 3.2
SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein Usp106|Sch... 26 3.2
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 26 3.2
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 25 4.3
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 4.3
SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces ... 25 5.6
SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit Nse6|Schizosa... 25 5.6
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 25 5.6
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 25 5.6
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 25 5.6
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 25 5.6
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 25 7.4
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 25 7.4
SPAC10F6.16 |mug134||endosulphine family protein|Schizosaccharom... 25 7.4
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 25 7.4
SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces pom... 25 7.4
SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|... 25 7.4
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 7.4
SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor Raf2|S... 24 9.8
SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|c... 24 9.8
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 24 9.8
SPBC2D10.11c |||nucleosome assembly protein Nap2 |Schizosaccharo... 24 9.8
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 24 9.8
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 24 9.8
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 30.7 bits (66), Expect = 0.11
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Frame = +2
Query: 140 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGAL 319
N +Q EK QD + ++ A+ ++ E + ++ +D + EL + A
Sbjct: 95 NARIQPDEKTLQDL---LEQRQVALREAREAEEELQRARQYNDRSTSEALELEARAKKAA 151
Query: 320 TDANGKAKEVLQQARQNLERTVEDLRK-AHPDVEKQATGITREAANRH 460
DA A E ++A+ ++ER+ K A + E+ AT + REA +H
Sbjct: 152 QDAE-LASERAREAQSSIERSASLREKQAREEAERAATAL-REAELKH 197
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.9 bits (64), Expect = 0.20
Identities = 24/82 (29%), Positives = 43/82 (52%)
Frame = +2
Query: 155 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 334
DLEK +D +K + ++ TE+++ +L+EG + ++++ELS+ L+ A
Sbjct: 1341 DLEKALKDSEKNFLRK-----EAEMTENIH-SLEEGKEETKKEIAELSSRLEDNQL-ATN 1393
Query: 335 KAKEVLQQARQNLERTVEDLRK 400
K K L Q + R ED+ K
Sbjct: 1394 KLKNQLDHLNQEI-RLKEDVLK 1414
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 29.5 bits (63), Expect = 0.26
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Frame = +2
Query: 116 AMVRRDAPNTILQDLEKHAQDFQKTI------SEQFNAIVNSKNTESLNKALKEGSDSMV 277
A+ +DA T L +L++ T QF A N+K E + +EG D+
Sbjct: 65 ALQGKDAVLTTLNELKELLSQIDATRIRDEKHKRQFEATENAKRKEEIEAQYREGYDTAQ 124
Query: 278 QQVSELSNSLQGA 316
+QVS L L+ A
Sbjct: 125 KQVSSLVRFLRFA 137
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 29.5 bits (63), Expect = 0.26
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 350 LQQARQNLERTVEDLRKAHPDVEK 421
++QAR E T+ED+++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 28.3 bits (60), Expect = 0.60
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 176 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD-ANGKAKEVL 352
D T Q + I+ ++ +ES + A SM + S+S A NG+AKE
Sbjct: 426 DLNDTTKNQNDQILPNETSESDDDA--NSISSMENEEERTSDSKSSAKQGKGNGRAKETP 483
Query: 353 QQARQNLERTVED 391
++ R ++T ED
Sbjct: 484 EEKRARKKKTKED 496
>SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 27.9 bits (59), Expect = 0.80
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +2
Query: 215 VNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 394
+N S++ L + D + S + NG A+E+ A + L VE+L
Sbjct: 29 LNLPTNSSISVTLSQ-DDLRTVTTASCSEKFENDTLWLNGNAEEIF--ANKRLRVCVEEL 85
Query: 395 RKAHPDVEKQ 424
RKA D+E++
Sbjct: 86 RKARLDLEEE 95
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.9 bits (59), Expect = 0.80
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +2
Query: 224 KNTESLNKALKEGSDSMVQQVSELSNSLQGA------LTDANGKAKEVLQQARQNLERT 382
K T++ + +E +S + + E + L A L D+ KAK L+QAR LERT
Sbjct: 364 KETDTTSVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELEQARIELERT 422
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 27.5 bits (58), Expect = 1.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 369 FWRACWSTSLALPFASVNAPCRLLDNSETCCTMESEPSFS 250
F C S +L+LP +N P R+ D +C ++ ++P S
Sbjct: 199 FCNQCSSKTLSLPHLGINQPVRVCD---SCYSLRTKPKGS 235
>SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 27.5 bits (58), Expect = 1.1
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 134 APNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQ 310
A + +++ HA+ + T + V +TES N+A+K+ D+ ++ +SE LQ
Sbjct: 159 ATDICVKETALHARHWYNTYI--ISEAVKGSSTESHNQAIKDFRDAKIEVISEKDPILQ 215
>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
family |Schizosaccharomyces pombe|chr 2|||Manual
Length = 430
Score = 27.1 bits (57), Expect = 1.4
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +2
Query: 71 AKCFVLFACVALAHGAMVRRD-----APNTILQDLEKHAQD 178
A+ ++L A + H + RD APNTIL+DL +H +D
Sbjct: 201 ARNWLLSAAIQPYHSWVYWRDVDVETAPNTILEDLMRHDKD 241
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.6 bits (56), Expect = 1.8
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2
Query: 191 ISEQFN-AIVNSKNTESLNKALKEGSDSMVQQVSELSNS--LQGALTDANGKAKEVLQQA 361
I +Q N +I N KNT N + K + + +S +SNS A+ + +AKE + A
Sbjct: 483 IPQQSNKSIGNHKNTSVANVSSKVANSKFERNISMMSNSNASSPAIFEVGAEAKEKTKDA 542
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 26.6 bits (56), Expect = 1.8
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -1
Query: 438 VMPVACFSTSGCALRRSSTVRSKFWRACWSTSLALPFASVNAPCRLLDNSETCCTME--S 265
V+P A + ++ A ++T+ + + W + +LP A C +D++ +C + S
Sbjct: 325 VIPSASYESTMSATL-TATMSCQATNSAWMAATSLPPTPSEAVCECMDSTRSCVINDDVS 383
Query: 264 EPSFSALF 241
+S LF
Sbjct: 384 SDDYSDLF 391
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 2.4
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Frame = +2
Query: 194 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD------ANGKAKEV-- 349
+EQF+ + + N + + G + + ++++ N +G + A K KE+
Sbjct: 189 NEQFSRALEALNDFVVPPLYEGGPSTRLSLITDVEN--EGLYREWQTSRYARNKQKEINI 246
Query: 350 LQQARQNLERTVEDLRKAHPDVEKQATGITREAANRH 460
LQQ R NLER +D+ + DV + R+A ++
Sbjct: 247 LQQIRFNLERICQDI--GNFDVRSRIERAARQAREKN 281
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 2.4
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +2
Query: 251 LKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQA---RQNLERTVEDLRKAHPDVEK 421
+ + S++ V + E + L L+ K+ L++ +Q L EDLRK D EK
Sbjct: 1005 ITKDSETRVALLLEENKHLNNELSSHRNAEKQHLEKENDYKQQLLLVTEDLRKTREDYEK 1064
Query: 422 Q 424
+
Sbjct: 1065 E 1065
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 25.8 bits (54), Expect = 3.2
Identities = 22/73 (30%), Positives = 29/73 (39%)
Frame = +1
Query: 211 NRQLKEHGELEQSTEGRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRG 390
N KE +Q TEG+ H QQ+T RK S P+ P G H+R
Sbjct: 673 NHHRKESIPSKQPTEGQ---HARQESLPSQQTTETKHLRKE----STPSKQPTEGQHTRQ 725
Query: 391 SPQGAPRRRETSH 429
+ + ET H
Sbjct: 726 ESLPSQQTTETKH 738
Score = 24.6 bits (51), Expect = 7.4
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +1
Query: 223 KEHGELEQSTEGRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQG 402
KE +Q TEG+ H QQ+T RK S P+ P G H+R
Sbjct: 709 KESTPSKQPTEGQ---HTRQESLPSQQTTETKHLRKE----SIPSKQPTEGQHARQESLP 761
Query: 403 APRRRETSH-RHYTRSCKPPS 462
+ + ET H R + K PS
Sbjct: 762 SQQTTETKHLRKESIPSKQPS 782
>SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein
Usp106|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 25.8 bits (54), Expect = 3.2
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +2
Query: 149 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 328
L+DLE+H D K I I ++ ++ K +E D +++ + +S++ +T+
Sbjct: 85 LEDLERHVDDCNKRID-----IAEARREKT--KEEEERIDELMRDIIHTDHSIEVIITEM 137
Query: 329 NGKAKEVL 352
AK L
Sbjct: 138 EALAKRKL 145
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 25.8 bits (54), Expect = 3.2
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 317 LTDANGKAKEVLQQARQN 370
LTD AKE+LQQAR N
Sbjct: 83 LTDVLSNAKELLQQARLN 100
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.4 bits (53), Expect = 4.3
Identities = 22/69 (31%), Positives = 31/69 (44%)
Frame = +2
Query: 233 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPD 412
ES N+ DSM ++ ELSN L+ AN K E R+ + DLR+
Sbjct: 824 ESSNQEYTATVDSMNSRILELSNDLR----VANSKLSECSDDVRRLTLQNSFDLREHQTL 879
Query: 413 VEKQATGIT 439
V + + IT
Sbjct: 880 VLQLQSNIT 888
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 25.4 bits (53), Expect = 4.3
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 140 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 307
NT+ + + K +Q FQ S +FN + N ++K+L++ + S+ N L
Sbjct: 487 NTVDEAITKQSQTFQLVNSNEFNEV----NANDVHKSLRQNCAKLDFDDSKSKNLL 538
>SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 441
Score = 25.0 bits (52), Expect = 5.6
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = -1
Query: 147 IVLGASR-RTIAP*ARATQANNTKHLA 70
+ LG SR TI+P RA Q++ ++HLA
Sbjct: 214 LALGLSRVYTISPAFRAEQSHTSRHLA 240
>SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit
Nse6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 5.6
Identities = 22/86 (25%), Positives = 35/86 (40%)
Frame = +2
Query: 143 TILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT 322
TIL L + Q F+K I+ SKN +S +L + D + + +L +
Sbjct: 343 TILSSLSRSCQKFRKKIAFTLFVGKQSKNDDSDFSSLCQRLDEISASCNNDYTTLLYQIR 402
Query: 323 DANGKAKEVLQQARQNLERTVEDLRK 400
E + + LE +E LRK
Sbjct: 403 TFGYAVDEKHFKTNERLECLLEKLRK 428
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 25.0 bits (52), Expect = 5.6
Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +2
Query: 101 ALAHGAM-VRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDS 271
+L GA V ++ I K DF K I FN + L A+ E S +
Sbjct: 46 SLTDGAKSVAKERQKKISDPARKFFSDFSKLIDNSFNVFAKKNEGDLLQNAIYELSQA 103
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 25.0 bits (52), Expect = 5.6
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +2
Query: 245 KALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHP 409
+ ++E S++ + SE+S + A+TD + KE+ A ++ + +KA P
Sbjct: 30 REIEESLPSILGEKSEVSKPFKPAVTDPSNAKKEI-NMAIESPSKKATSPKKATP 83
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 25.0 bits (52), Expect = 5.6
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 185 KTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNS 304
KT+S++ + S+ T SLNKA K+ + + ++ +S S
Sbjct: 164 KTLSKRLLDLALSEKTHSLNKASKKSNKNGDKKRKHVSKS 203
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 25.0 bits (52), Expect = 5.6
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Frame = +2
Query: 116 AMVRRDAPNTILQDLEKHAQDFQKTISEQFNA--IVNSKNTESLNKALKEGSDSMVQQVS 289
+M R A + +K + D T S+Q +V S N +LNK +E SDS+ Q S
Sbjct: 75 SMSRTSASSFRYSSPQKSSIDTPITSSDQGLTPDLVGSSN--ALNKPTRE-SDSLKHQKS 131
Query: 290 E-LSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATGITR 442
+ NSL +L+ ++ +R NL+ + A D + A ++R
Sbjct: 132 HPMLNSLGSSLSLKKSVSRPPSSMSRTNLDVSSRWDNTADNDSQIDAQDLSR 183
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 24.6 bits (51), Expect = 7.4
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 228 FFELTIALNCSLIVFWKSWACFSRSCNIVLGASRRTIAP 112
+ E+T N + +K W C + CN + G ++I P
Sbjct: 247 YIEITSKHNYDIDFKYK-WLCINEKCNKLYGRHSKSINP 284
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 24.6 bits (51), Expect = 7.4
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +2
Query: 263 SDSMVQQVSELSNSLQGALTDANGKA---KEVL-QQARQNLERTVEDLRKAHPDVEKQAT 430
SD ++ E N + TD K+ L QQA ++L + DLR+ V
Sbjct: 568 SDMARKEAIENGNRAESVCTDIESNLDIHKDKLDQQAVEDLRSKITDLRETVAKVNAGDE 627
Query: 431 GITRE 445
GIT E
Sbjct: 628 GITSE 632
>SPAC10F6.16 |mug134||endosulphine family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 24.6 bits (51), Expect = 7.4
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +1
Query: 349 APTSSPELGAH--SRGSPQGAPRRRETSHRH 435
+P P L S SP GA RRE+ RH
Sbjct: 102 SPNKEPSLHTKRPSESSPSGASSRRESVTRH 132
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 24.6 bits (51), Expect = 7.4
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 28 NFASNSHRLRHRHGRQVLRVVRLRCPRSRSDGP 126
N S R RH HGR P R+D P
Sbjct: 248 NVDSRPRRERHFHGRSFAHAEHHSVPNMRNDTP 280
>SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 220
Score = 24.6 bits (51), Expect = 7.4
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 225 FELTIALNCSLIVFWKSWACFSRSCNIVLGASRRTI 118
+++++ L L + WKSW S S ++L +S R +
Sbjct: 139 YQISVVLLLCLTMGWKSWT--SASGAVILSSSTRML 172
>SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 664
Score = 24.6 bits (51), Expect = 7.4
Identities = 13/81 (16%), Positives = 39/81 (48%)
Frame = +2
Query: 191 ISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQN 370
I ++FN + ++++++ S LS+++ ++ ++ +E + ++
Sbjct: 122 ILQRFNPELFNRSSDNETPLFPNNSPPASTTALNLSSNIVPSINESKILEQEDDDVSNKS 181
Query: 371 LERTVEDLRKAHPDVEKQATG 433
L + + ++ PD++KQ G
Sbjct: 182 LPHAQQSIIRSFPDIQKQPKG 202
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 24.6 bits (51), Expect = 7.4
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = +1
Query: 352 PTSSP--ELGAHSRGSPQG 402
PT SP E AHSR SPQG
Sbjct: 255 PTVSPTNEPSAHSRPSPQG 273
>SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor
Raf2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 24.2 bits (50), Expect = 9.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 346 SAPTSSPELGAHSRGSPQGAP 408
S+PT++P+LG R SP P
Sbjct: 250 SSPTATPQLGVVKRTSPLRFP 270
>SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 547
Score = 24.2 bits (50), Expect = 9.8
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 7 GFSRRPGNFASNSHRLRHRHGRQVLRVVRLRCPRSRSD 120
GF N SNS R HRH + + R+R S D
Sbjct: 28 GFPNPNSNDVSNSQRNHHRH---MFPLARIRSELSEQD 62
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 24.2 bits (50), Expect = 9.8
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +2
Query: 239 LNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE 418
L K E SD ++ ++ LS+ L L DAN L+ L+ ++ L A P+V+
Sbjct: 6 LLKKYVESSDKDIRYMA-LSD-LAARLNDANHLKNLKLESFPDTLDVLLQALSDASPEVQ 63
Query: 419 KQA 427
++A
Sbjct: 64 QEA 66
>SPBC2D10.11c |||nucleosome assembly protein Nap2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 379
Score = 24.2 bits (50), Expect = 9.8
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 338 AKEVLQQARQNLERTVEDLRKAHPDV 415
+K L++ARQ L+ +ED + AH +V
Sbjct: 31 SKAALEKARQTLQSQLED-KSAHDEV 55
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 24.2 bits (50), Expect = 9.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 233 ESLNKALKEGSDSMVQQVSELSNSLQGAL 319
E + A E S++Q++SEL +QG L
Sbjct: 79 EDMANAFAEKRRSVLQELSELEEEVQGIL 107
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 24.2 bits (50), Expect = 9.8
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = +2
Query: 152 QDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQ 310
Q ++K + +KT+SE + + + N+ LKE + S V + + +L+
Sbjct: 582 QQIDKFSTFIRKTLSETIDNLQLLTSPIVTNQVLKETAISFVGAIETVDKALE 634
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,693,916
Number of Sequences: 5004
Number of extensions: 28993
Number of successful extensions: 171
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 174340060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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