Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_G18
(462 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0102 + 8414109-8414505,8416172-8416227 33 0.11
09_06_0097 + 20845417-20845518,20845728-20846581,20846666-208467... 31 0.34
12_02_0797 - 23230441-23230757,23230922-23231069,23231352-232325... 31 0.60
02_05_0023 + 25138709-25138823,25139013-25139197,25139268-251393... 30 0.79
11_08_0086 + 28268227-28270008 29 1.4
05_04_0356 - 20584212-20584628,20584798-20584899,20585658-205857... 29 1.4
01_06_1582 - 38430573-38430599,38430750-38430857,38431503-384315... 29 1.4
05_01_0488 - 4070506-4072277,4072455-4072557 28 3.2
04_01_0180 + 2034021-2034023,2034741-2035088 28 3.2
02_05_0109 - 25909126-25909308,25909454-25909660,25910130-259103... 28 3.2
02_04_0013 - 18910009-18910056,18910154-18910282,18910373-189104... 28 3.2
04_04_0201 - 23555336-23556008,23556097-23556258,23556353-235572... 27 5.6
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 27 5.6
02_03_0168 + 15932050-15932805 27 5.6
06_03_0615 - 22761375-22761760,22762218-22765026 27 7.3
06_01_0768 + 5742938-5743196,5743291-5744729 27 7.3
05_03_0475 + 14486969-14487140,14487215-14487338,14487424-144875... 27 7.3
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 27 7.3
12_02_0693 - 22207582-22207620,22208421-22208597,22209258-222093... 27 9.7
10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,117... 27 9.7
05_05_0231 + 23488588-23488689,23488775-23488875,23489012-234891... 27 9.7
05_01_0547 - 4774320-4776089,4776823-4777028,4777563-4777818 27 9.7
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 27 9.7
03_05_0179 - 21583234-21584336,21586274-21586358,21586665-215867... 27 9.7
01_06_1501 + 37804029-37804600,37804626-37805388 27 9.7
01_01_0592 + 4414416-4415132 27 9.7
>05_03_0102 + 8414109-8414505,8416172-8416227
Length = 150
Score = 33.1 bits (72), Expect = 0.11
Identities = 21/89 (23%), Positives = 43/89 (48%)
Frame = +2
Query: 152 QDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDAN 331
+D+E+ + + Q+NA+ + L + + D++ + ELS + + D
Sbjct: 8 EDVEEDGNNNEPITRLQYNAL-----RDVLRREMNSRMDTLEGRTDELSQKFEKTIQDFE 62
Query: 332 GKAKEVLQQARQNLERTVEDLRKAHPDVE 418
+ ++Q RQN+ + +E L + PDVE
Sbjct: 63 VQVNNNMEQLRQNIVQDLEHLLR--PDVE 89
>09_06_0097 +
20845417-20845518,20845728-20846581,20846666-20846726,
20847320-20847358,20847602-20847682
Length = 378
Score = 31.5 bits (68), Expect = 0.34
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +2
Query: 239 LNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE 418
L LKE + +++Q +L SLQ L +A+ K + + +E+ E+L K VE
Sbjct: 25 LEAVLKEEEEDLLKQEEQLKQSLQ-ELFEAHATVKARIDKVHTQVEKDEEELEKLRL-VE 82
Query: 419 KQA 427
+QA
Sbjct: 83 RQA 85
>12_02_0797 -
23230441-23230757,23230922-23231069,23231352-23232562,
23232639-23232894,23234073-23234309
Length = 722
Score = 30.7 bits (66), Expect = 0.60
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +2
Query: 155 DLEKHAQDFQKTISEQFNAIVNSK-NTESLNKALKEGSDSMVQQVSELSNSLQGALTDAN 331
DL+ Q FQ ++SE+ + ++K ++S N + + +++ + S SLQ
Sbjct: 106 DLQAAIQRFQPSLSEKPPSKRSNKLRSDSSNSGSQHAASLVLEAIYLKSMSLQKL----- 160
Query: 332 GKAKEVLQQARQNLERTVEDLRKAHPDV 415
GKA E QQ R L+ ++ PDV
Sbjct: 161 GKAVEAAQQCRSVLDAVESIFQRGIPDV 188
>02_05_0023 +
25138709-25138823,25139013-25139197,25139268-25139335,
25139729-25140041,25140621-25140962,25140990-25141079
Length = 370
Score = 30.3 bits (65), Expect = 0.79
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 424 LFLDVGVRLAEILDCALQVLASLLEHFLSFTVCVGQ 317
L L +GV +A + D L +L S+L T CVGQ
Sbjct: 131 LILLLGVGIASVTDLKLNLLGSVLSGLAIATTCVGQ 166
>11_08_0086 + 28268227-28270008
Length = 593
Score = 29.5 bits (63), Expect = 1.4
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +2
Query: 146 ILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVS-ELSNSLQGALT 322
+L +L HA + E+ ++++ + +NK K+GS S V + L Q T
Sbjct: 167 LLDELMLHAHETCIKDMEKLRIDMDNEAEKKINKKDKKGSSSKVVDLRLLLIQCAQATAT 226
Query: 323 DANGKAKEVLQQARQNLERTVEDL-RKAH 406
D A E+L++ +Q+ T + + R AH
Sbjct: 227 DNQQSAGELLKKIKQHALATGDAMQRVAH 255
>05_04_0356 -
20584212-20584628,20584798-20584899,20585658-20585705,
20586046-20586186,20586315-20586437,20587166-20587252,
20587630-20587742,20587844-20587943,20588217-20588601,
20588841-20588917,20589501-20589593,20589697-20589774,
20590923-20591246
Length = 695
Score = 29.5 bits (63), Expect = 1.4
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Frame = +2
Query: 101 ALAHGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKN---TESLNKALK---EG 262
A H + ++ N QDL K+ +K + QF+ + S N TE+++ A K EG
Sbjct: 270 APGHLGLQQKITSNGANQDLSKNMHHKEKYNAGQFSGLHASSNIYSTETMHLATKIHTEG 329
Query: 263 SDSMVQ--QVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATGI 436
S + + ++ LQ +T+ + +V +A N + V+ R+ +V+++ +
Sbjct: 330 SGTKTKGTRLERAIRDLQNIVTEYKPQILDV-HEAEANCQVAVK--RRLPQEVKQKLAKV 386
Query: 437 TREAANR 457
R +AN+
Sbjct: 387 ARLSANQ 393
>01_06_1582 -
38430573-38430599,38430750-38430857,38431503-38431569,
38431847-38432070,38432154-38432246,38432665-38432717,
38433122-38433572
Length = 340
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 361 SPELGAH-SRGSPQGAPRRRETSHRHYTRSCKPP 459
SP L +H S +P G+P R H H+ R+ PP
Sbjct: 15 SPVLSSHFSPPAPGGSPAWRRGRHHHHRRAFHPP 48
>05_01_0488 - 4070506-4072277,4072455-4072557
Length = 624
Score = 28.3 bits (60), Expect = 3.2
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Frame = +2
Query: 134 APNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSEL------ 295
+P++ +DL++ QK S+ F+ + S + ++K +GS S + EL
Sbjct: 110 SPSSPERDLQEKMSQKQKPRSDCFDVSIGSGMSSDVSKKGSDGSSSSSESDLELDEAKEE 169
Query: 296 -SNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAH 406
NS+ AL+ + ++ L + R L+ + E + H
Sbjct: 170 NGNSIFYALSQKIIELEDELHEVRGKLDASEEKNMRCH 207
>04_01_0180 + 2034021-2034023,2034741-2035088
Length = 116
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +2
Query: 254 KEGSDSMVQQVSELS---NSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQ 424
+E +D+ QV L+ + L + + N E L++ QNL R E+ +K H +++K+
Sbjct: 20 RENADAHKDQVKGLNGRISKLNDTIKELNDTI-EALERQVQNLTRYKEEKQKQHANLQKE 78
Query: 425 ATGITRE 445
+ R+
Sbjct: 79 FAELERK 85
>02_05_0109 -
25909126-25909308,25909454-25909660,25910130-25910336,
25910411-25910459,25911005-25911204,25911275-25911360,
25911441-25911597,25911808-25911972,25913254-25913490
Length = 496
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +2
Query: 212 IVNSKNTESLNKALKEGSDSMV-QQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVE 388
+++ K+ E L KAL+E SD+++ +++ + S L G L G VLQ R + + V+
Sbjct: 370 LLHDKSEEKL-KALREISDTVMHRKLLDSSVDLVGKLLFGFGNGPSVLQAVRPSGQPLVD 428
Query: 389 D 391
D
Sbjct: 429 D 429
>02_04_0013 -
18910009-18910056,18910154-18910282,18910373-18910420,
18910532-18910594,18910675-18910713,18912107-18912180,
18913014-18913072,18913265-18913324,18913466-18913590,
18914054-18914112,18914356-18914419,18914516-18914569,
18914727-18914765,18916135-18916275
Length = 333
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 227 NTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVL 352
N E+L KAL+EG + + ++ L S + L NG++K VL
Sbjct: 73 NFENLEKALEEGGE-LYEKTVYLFGSTEPQLLGVNGESKIVL 113
>04_04_0201 -
23555336-23556008,23556097-23556258,23556353-23557206,
23557452-23557613,23558197-23558649,23559729-23559788,
23559983-23560058,23561546-23561593,23561948-23562022,
23562067-23562494
Length = 996
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 343 GSAPTSSPELGAHSRGSPQGAPRRRETSHR 432
GSA +SSP +RGS G+P RR R
Sbjct: 27 GSAASSSPRWLPRARGSTVGSPPRRGGEER 56
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 27.5 bits (58), Expect = 5.6
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Frame = +2
Query: 155 DLEKHAQDFQKTISEQFNAIVNSKN-TESLNKALKEGSDSMVQQVSELSNSLQGALTDAN 331
++EK ++ + E+ N + + E+ K E ++S +Q++ LQ
Sbjct: 608 EMEKKQASKERELEEKENELNRKMDFVENELKRAAELNESKIQKILLEKKQLQ------- 660
Query: 332 GKAKEVLQQARQNLERTVEDLRKAHPDVEKQATGI--TREAANR 457
K KEVL + RQ LE D+R+ + + + REA NR
Sbjct: 661 -KEKEVLVEDRQKLETDKADIRRDIDSLNTLSKSLKERREAYNR 703
>02_03_0168 + 15932050-15932805
Length = 251
Score = 27.5 bits (58), Expect = 5.6
Identities = 23/100 (23%), Positives = 41/100 (41%)
Frame = +2
Query: 161 EKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKA 340
+ A +F + +I +S+ + +DS Q SELS+S GA+ A A
Sbjct: 21 QPEASEFDDVVPAILESIKSSEKAFKPSPEEAAWADSCFVQTSELSDSDWGAMKHALLNA 80
Query: 341 KEVLQQARQNLERTVEDLRKAHPDVEKQATGITREAANRH 460
E + N V + +H +E + + E ++H
Sbjct: 81 LEKPTEIPNNTSEIVHE-EGSHAILEVKPHSLPAEIVSQH 119
>06_03_0615 - 22761375-22761760,22762218-22765026
Length = 1064
Score = 27.1 bits (57), Expect = 7.3
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +2
Query: 113 GAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTE-SLNKALKE-----GSDSM 274
GA+ A T+L+ L+ H F I QF ++N + + S+NK E G+ S
Sbjct: 494 GALPGELANITVLELLDVHNNSFTGAIPPQFGELMNLEQLDLSMNKLTGEIPASFGNFSY 553
Query: 275 VQQVSELSNSLQGAL 319
+ ++ N L G L
Sbjct: 554 LNKLILSGNMLSGTL 568
>06_01_0768 + 5742938-5743196,5743291-5744729
Length = 565
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 279 SRSPSYPTVYRVR*PTQTVKLRKCSNKLARTWSAQSRISARRTPTS 416
+RSP V R+R Q R+C A W A R+ +RR T+
Sbjct: 121 ARSPCRHLVKRLR--EQEALQRRCGPGTAAYWRAAERLGSRRNGTA 164
>05_03_0475 +
14486969-14487140,14487215-14487338,14487424-14487559,
14487663-14488997
Length = 588
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +1
Query: 343 GSAPTSSPELGAHSRGSPQGA--PRRRE 420
GS+ ++SP A +RG+P GA PR R+
Sbjct: 208 GSSASTSPRTPATARGAPAGAAWPRHRD 235
>03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 27.1 bits (57), Expect = 7.3
Identities = 25/100 (25%), Positives = 45/100 (45%)
Frame = +2
Query: 161 EKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKA 340
EK + + Q I + + IVN K+ +A E +Q + Q L++A +
Sbjct: 800 EKESSELQ--IHDSKSLIVNLKDKVERQQAEMETQRLEFKQKQQ---EAQRKLSEAQDDS 854
Query: 341 KEVLQQARQNLERTVEDLRKAHPDVEKQATGITREAANRH 460
EVL+++ L+ TVE L + ++ Q + R+ H
Sbjct: 855 -EVLRRSNSKLQSTVESLIEECSSLQNQIAELKRQKLELH 893
>12_02_0693 - 22207582-22207620,22208421-22208597,22209258-22209347,
22210215-22210280,22210473-22210570,22210669-22210789,
22210875-22212477,22213332-22213915
Length = 925
Score = 26.6 bits (56), Expect = 9.7
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 6/97 (6%)
Frame = +2
Query: 188 TISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDAN------GKAKEV 349
T FN+ ++ S A + S +LS GA T + G+++E
Sbjct: 728 TADSMFNSQTQNRGAASSASASMRKASSTTNIADDLSAIFGGAPTSSEEFQEIEGESEER 787
Query: 350 LQQARQNLERTVEDLRKAHPDVEKQATGITREAANRH 460
+ + +RT E KA + ++ + RE A RH
Sbjct: 788 RRARFERHQRTRERAAKALAEKNERDMQVQREQAERH 824
>10_01_0097 -
1171949-1172047,1172520-1172591,1172791-1172949,
1172998-1173381,1173478-1175253,1175329-1175452,
1176859-1177027,1177131-1177226,1177339-1177527,
1177965-1179303
Length = 1468
Score = 26.6 bits (56), Expect = 9.7
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 251 LKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 394
LK+ + +QVS N+ + T A G EVLQ QNL RT+ L
Sbjct: 745 LKKLAPESYKQVS--GNTSNSSETVAAGSIDEVLQSMDQNLFRTLPKL 790
>05_05_0231 +
23488588-23488689,23488775-23488875,23489012-23489168,
23489365-23489594,23489696-23489795,23489878-23489916
Length = 242
Score = 26.6 bits (56), Expect = 9.7
Identities = 24/95 (25%), Positives = 44/95 (46%)
Frame = +2
Query: 146 ILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD 325
ILQ+ E+ A + E+FN I + ES + +++ + +QV ++ ++ + T
Sbjct: 17 ILQEAEEKASEISVAAEEEFN-IEKLQLVESEKRRIRQDYERKAKQV-DVGRKIEYS-TQ 73
Query: 326 ANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQAT 430
N +VL+ + ED K+ V K AT
Sbjct: 74 LNAARIKVLRAQDGVVGEMKEDAGKSLLRVTKDAT 108
>05_01_0547 - 4774320-4776089,4776823-4777028,4777563-4777818
Length = 743
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/66 (24%), Positives = 28/66 (42%)
Frame = +2
Query: 140 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGAL 319
+ +L LE+ S+ I N N+ + + +++SE+ S +GAL
Sbjct: 385 DNLLNQLEEKLSAALSDTSKNKIIIAELNNELDTNRTMLDNEAEAHKKLSEILQSTEGAL 444
Query: 320 TDANGK 337
TD K
Sbjct: 445 TDYRDK 450
>03_05_0432 -
24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 26.6 bits (56), Expect = 9.7
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Frame = +2
Query: 170 AQDFQKTISEQFNAIVNSKNTESLN---KALKEGSDSMVQQVSELSNSLQGALTDANGKA 340
A+ F+K + + + + ESL K L+E S+++ Q S L + + L +
Sbjct: 502 AELFEKNVFLENSLSDANAELESLRGKLKELEESSEALYSQNSALQHE-KSTLACQVDRI 560
Query: 341 KEVLQQARQNLERTVEDLRKAHPDVEKQATGITRE 445
+ LQ NLE +L K H D++++ + E
Sbjct: 561 SDTLQ----NLEAHYAELEKRHSDLQEEKGSVLDE 591
>03_05_0179 -
21583234-21584336,21586274-21586358,21586665-21586713,
21586801-21586874,21586958-21587050,21587120-21587174,
21587348-21587421,21587702-21587814,21587911-21588168,
21588915-21589012,21589139-21589256,21589754-21589848,
21590001-21590159,21590336-21590525,21590881-21591021,
21591142-21591176,21591659-21591699
Length = 926
Score = 26.6 bits (56), Expect = 9.7
Identities = 21/101 (20%), Positives = 41/101 (40%)
Frame = +2
Query: 137 PNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGA 316
PN ++ E D +K + N + + L+E SD M + ++ S A
Sbjct: 219 PNANTEN-EMTGGDLEKASGSLLDQSKQPLNIKRDRRRLEEVSDKMWKDEAKEIGSRSPA 277
Query: 317 LTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATGIT 439
LT + K ++LQ + + + A ++ + G+T
Sbjct: 278 LTKGSTKESQMLQSLDGKAKNAQKRRKDAKQELRSKIPGVT 318
>01_06_1501 + 37804029-37804600,37804626-37805388
Length = 444
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 214 RQLKEHGEL-EQSTEGRLRLHGAAGLRVIQQSTGCVD 321
R L HG++ ++T R R H A RV+ CVD
Sbjct: 129 RLLARHGDVPRRATRPRRRRHPRAARRVVLLGCACVD 165
>01_01_0592 + 4414416-4415132
Length = 238
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 25 GNFASNSHRLRHRHGRQVLRVVRLR 99
G+ A+ +HR R GR+ +R V +R
Sbjct: 154 GSLAAGAHRAASRRGRRAVRAVHVR 178
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,262,117
Number of Sequences: 37544
Number of extensions: 233114
Number of successful extensions: 978
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 919380308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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