Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_G16
         (623 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U68567-1|AAC50812.1|  988|Homo sapiens lysosomal acid alpha-mann...    37   0.050
U60899-1|AAC51362.1| 1010|Homo sapiens lysosomal alpha-mannosida...    37   0.050
U60266-1|AAC34130.1| 1011|Homo sapiens lysosomal alpha-mannosida...    37   0.050
U05572-1|AAB03816.1|  987|Homo sapiens alpha-mannosidase protein.      37   0.050
BC000736-1|AAH00736.1| 1011|Homo sapiens mannosidase, alpha, cla...    37   0.050
AB209921-1|BAD93158.1| 1007|Homo sapiens mannosidase, alpha, cla...    37   0.050

>U68567-1|AAC50812.1|  988|Homo sapiens lysosomal acid
           alpha-mannosidase protein.
          Length = 988

 Score = 37.1 bits (82), Expect = 0.050
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = +3

Query: 450 FGYYPGCVGDNREPANRSSGAYIFRPNSTSPEPYRSQATVKRIE 581
           F +Y   +GDN   ++++SGAYIFRPN   P P    A +  ++
Sbjct: 618 FFWYNASIGDNE--SDQASGAYIFRPNQQKPLPVSRWAQIHLVK 659


>U60899-1|AAC51362.1| 1010|Homo sapiens lysosomal alpha-mannosidase
           protein.
          Length = 1010

 Score = 37.1 bits (82), Expect = 0.050
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = +3

Query: 450 FGYYPGCVGDNREPANRSSGAYIFRPNSTSPEPYRSQATVKRIE 581
           F +Y   +GDN   ++++SGAYIFRPN   P P    A +  ++
Sbjct: 640 FFWYNASIGDNE--SDQASGAYIFRPNQQKPLPVSRWAQIHLVK 681


>U60266-1|AAC34130.1| 1011|Homo sapiens lysosomal alpha-mannosidase
           protein.
          Length = 1011

 Score = 37.1 bits (82), Expect = 0.050
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = +3

Query: 450 FGYYPGCVGDNREPANRSSGAYIFRPNSTSPEPYRSQATVKRIE 581
           F +Y   +GDN   ++++SGAYIFRPN   P P    A +  ++
Sbjct: 641 FFWYNASIGDNE--SDQASGAYIFRPNQQKPLPVSRWAQIHLVK 682


>U05572-1|AAB03816.1|  987|Homo sapiens alpha-mannosidase protein.
          Length = 987

 Score = 37.1 bits (82), Expect = 0.050
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = +3

Query: 450 FGYYPGCVGDNREPANRSSGAYIFRPNSTSPEPYRSQATVKRIE 581
           F +Y   +GDN   ++++SGAYIFRPN   P P    A +  ++
Sbjct: 617 FFWYNASIGDNE--SDQASGAYIFRPNQQKPLPVSRWAQIHLVK 658


>BC000736-1|AAH00736.1| 1011|Homo sapiens mannosidase, alpha, class
           2B, member 1 protein.
          Length = 1011

 Score = 37.1 bits (82), Expect = 0.050
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = +3

Query: 450 FGYYPGCVGDNREPANRSSGAYIFRPNSTSPEPYRSQATVKRIE 581
           F +Y   +GDN   ++++SGAYIFRPN   P P    A +  ++
Sbjct: 641 FFWYNASIGDNE--SDQASGAYIFRPNQQKPLPVSRWAQIHLVK 682


>AB209921-1|BAD93158.1| 1007|Homo sapiens mannosidase, alpha, class
           2B, member 1 precursor variant protein.
          Length = 1007

 Score = 37.1 bits (82), Expect = 0.050
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = +3

Query: 450 FGYYPGCVGDNREPANRSSGAYIFRPNSTSPEPYRSQATVKRIE 581
           F +Y   +GDN   ++++SGAYIFRPN   P P    A +  ++
Sbjct: 637 FFWYNASIGDNE--SDQASGAYIFRPNQQKPLPVSRWAQIHLVK 678


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,520,066
Number of Sequences: 237096
Number of extensions: 1365190
Number of successful extensions: 2749
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2749
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)