Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_G15
(593 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 235 7e-62
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 235 7e-62
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 235 7e-62
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 235 7e-62
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 235 7e-62
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 235 7e-62
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 235 7e-62
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 235 7e-62
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 235 7e-62
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 235 7e-62
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 233 3e-61
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 226 5e-59
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 147 3e-35
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 145 9e-35
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 77 6e-14
AY167994-1|AAO38808.1| 201|Homo sapiens alpha 2,3-sialyltransfe... 34 0.33
AL592548-3|CAI22183.1| 201|Homo sapiens ST3 beta-galactoside al... 34 0.33
AL592548-2|CAI22181.1| 185|Homo sapiens ST3 beta-galactoside al... 34 0.33
AL451062-4|CAH71024.1| 201|Homo sapiens ST3 beta-galactoside al... 34 0.33
AL451062-3|CAH71022.1| 185|Homo sapiens ST3 beta-galactoside al... 34 0.33
AL357079-3|CAI16787.1| 201|Homo sapiens ST3 beta-galactoside al... 34 0.33
AL357079-2|CAI16786.1| 185|Homo sapiens ST3 beta-galactoside al... 34 0.33
AF425863-1|AAO13871.1| 185|Homo sapiens alpha 2,3-sialyltransfe... 34 0.33
BC004907-1|AAH04907.2| 551|Homo sapiens EPS8-like 1 protein. 32 1.3
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 235 bits (576), Expect = 7e-62
Identities = 107/193 (55%), Positives = 143/193 (74%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEK 554
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 555 VAKATAPFTTVVQ 593
V K +T V++
Sbjct: 185 VEKKIDKYTEVLK 197
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 235 bits (576), Expect = 7e-62
Identities = 107/193 (55%), Positives = 143/193 (74%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEK 554
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 555 VAKATAPFTTVVQ 593
V K +T V++
Sbjct: 185 VEKKIDKYTEVLK 197
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 235 bits (576), Expect = 7e-62
Identities = 107/193 (55%), Positives = 143/193 (74%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEK 554
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 555 VAKATAPFTTVVQ 593
V K +T V++
Sbjct: 185 VEKKIDKYTEVLK 197
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 235 bits (576), Expect = 7e-62
Identities = 107/193 (55%), Positives = 143/193 (74%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEK 554
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 555 VAKATAPFTTVVQ 593
V K +T V++
Sbjct: 185 VEKKIDKYTEVLK 197
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 235 bits (576), Expect = 7e-62
Identities = 107/193 (55%), Positives = 143/193 (74%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEK 554
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 555 VAKATAPFTTVVQ 593
V K +T V++
Sbjct: 185 VEKKIDKYTEVLK 197
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 235 bits (576), Expect = 7e-62
Identities = 107/193 (55%), Positives = 143/193 (74%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 3 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 62
Query: 195 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 63 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 122
Query: 375 XXFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEK 554
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A +
Sbjct: 123 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 182
Query: 555 VAKATAPFTTVVQ 593
V K +T V++
Sbjct: 183 VEKKIDKYTEVLK 195
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 235 bits (576), Expect = 7e-62
Identities = 107/193 (55%), Positives = 143/193 (74%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEK 554
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 555 VAKATAPFTTVVQ 593
V K +T V++
Sbjct: 185 VEKKIDKYTEVLK 197
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 235 bits (576), Expect = 7e-62
Identities = 107/193 (55%), Positives = 143/193 (74%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEK 554
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 555 VAKATAPFTTVVQ 593
V K +T V++
Sbjct: 185 VEKKIDKYTEVLK 197
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 235 bits (576), Expect = 7e-62
Identities = 107/193 (55%), Positives = 143/193 (74%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEK 554
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 555 VAKATAPFTTVVQ 593
V K +T V++
Sbjct: 185 VEKKIDKYTEVLK 197
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 235 bits (576), Expect = 7e-62
Identities = 107/193 (55%), Positives = 143/193 (74%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEK 554
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 555 VAKATAPFTTVVQ 593
V K +T V++
Sbjct: 185 VEKKIDKYTEVLK 197
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 233 bits (571), Expect = 3e-61
Identities = 106/193 (54%), Positives = 142/193 (73%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK+++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 374
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL L+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDHLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEK 554
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 555 VAKATAPFTTVVQ 593
V K +T V++
Sbjct: 185 VEKKIDKYTEVLK 197
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 226 bits (552), Expect = 5e-59
Identities = 103/193 (53%), Positives = 140/193 (72%)
Frame = +3
Query: 15 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNV 194
+ +V+DGRGHLLGRLAA++AK +L G KVVVV CE INISGNF+RNKL +++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVCCEGINISGNFYRNKLNYLAFLRKRMNT 64
Query: 195 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 374
+P+RGP+HFRAPS++ W+TVRGM+PHKT+RG+ AL RL+ DG PPP+D
Sbjct: 65 SPSRGPYHFRAPSRVFWRTVRGMLPHKTKRGQAALDRLKVSDGIPPPYDKKKRMVVPAAL 124
Query: 375 XXFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEK 554
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 555 VAKATAPFTTVVQ 593
V K +T V++
Sbjct: 185 VEKKIDKYTEVLK 197
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 147 bits (356), Expect = 3e-35
Identities = 66/135 (48%), Positives = 91/135 (67%)
Frame = +3
Query: 189 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 368
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 369 XXXXFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAG 548
LKP RK+ ++GRL+HEVGWKY+ V LEDKRK KA +++L ++ K+A
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEDKRKEKAKIHYRKKKQLMRLRKQAE 121
Query: 549 EKVAKATAPFTTVVQ 593
+ V K +T V++
Sbjct: 122 KNVEKKIDKYTEVLK 136
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 145 bits (352), Expect = 9e-35
Identities = 65/135 (48%), Positives = 91/135 (67%)
Frame = +3
Query: 189 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 368
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 369 XXXXFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAG 548
LKP RK+ ++GRL+HEVGWKY+ V LE+KRK KA +++L ++ K+A
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAE 121
Query: 549 EKVAKATAPFTTVVQ 593
+ V K +T V++
Sbjct: 122 KNVEKKIDKYTEVLK 136
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 76.6 bits (180), Expect = 6e-14
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Frame = +3
Query: 261 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRKYCHVGRLSHEVG 440
M+ HKT+RG +L L+ +DG PPP+D LKP RK+ +GR + EV
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEVR 60
Query: 441 WKYRDVVRKLEDKRKVKAIKLISYERK-LKKITKEAGEKVAK 563
WKY+ V LE+KRK KA K+ +++K L ++ K+A + V K
Sbjct: 61 WKYQAVTATLEEKRKEKA-KIHYWKKKQLMRLRKQAEKNVKK 101
>AY167994-1|AAO38808.1| 201|Homo sapiens alpha
2,3-sialyltransferase III type D5 protein.
Length = 201
Score = 34.3 bits (75), Expect = 0.33
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = -2
Query: 448 YFHPTSCERRPT*QYLRPGFRQNTRS---AAGTTTRRLLSNGGGQPSYVRSLLNAFFPR 281
Y H +S + +P +Y R GF N S A T S G +P Y +L+ A FPR
Sbjct: 42 YSHSSSPQEKPVAEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPR 100
>AL592548-3|CAI22183.1| 201|Homo sapiens ST3 beta-galactoside
alpha-2,3-sialyltransferase 3 protein.
Length = 201
Score = 34.3 bits (75), Expect = 0.33
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = -2
Query: 448 YFHPTSCERRPT*QYLRPGFRQNTRS---AAGTTTRRLLSNGGGQPSYVRSLLNAFFPR 281
Y H +S + +P +Y R GF N S A T S G +P Y +L+ A FPR
Sbjct: 42 YSHSSSPQEKPVAEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPR 100
>AL592548-2|CAI22181.1| 185|Homo sapiens ST3 beta-galactoside
alpha-2,3-sialyltransferase 3 protein.
Length = 185
Score = 34.3 bits (75), Expect = 0.33
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = -2
Query: 448 YFHPTSCERRPT*QYLRPGFRQNTRS---AAGTTTRRLLSNGGGQPSYVRSLLNAFFPR 281
Y H +S + +P +Y R GF N S A T S G +P Y +L+ A FPR
Sbjct: 42 YSHSSSPQEKPVAEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPR 100
>AL451062-4|CAH71024.1| 201|Homo sapiens ST3 beta-galactoside
alpha-2,3-sialyltransferase 3 protein.
Length = 201
Score = 34.3 bits (75), Expect = 0.33
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = -2
Query: 448 YFHPTSCERRPT*QYLRPGFRQNTRS---AAGTTTRRLLSNGGGQPSYVRSLLNAFFPR 281
Y H +S + +P +Y R GF N S A T S G +P Y +L+ A FPR
Sbjct: 42 YSHSSSPQEKPVAEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPR 100
>AL451062-3|CAH71022.1| 185|Homo sapiens ST3 beta-galactoside
alpha-2,3-sialyltransferase 3 protein.
Length = 185
Score = 34.3 bits (75), Expect = 0.33
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = -2
Query: 448 YFHPTSCERRPT*QYLRPGFRQNTRS---AAGTTTRRLLSNGGGQPSYVRSLLNAFFPR 281
Y H +S + +P +Y R GF N S A T S G +P Y +L+ A FPR
Sbjct: 42 YSHSSSPQEKPVAEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPR 100
>AL357079-3|CAI16787.1| 201|Homo sapiens ST3 beta-galactoside
alpha-2,3-sialyltransferase 3 protein.
Length = 201
Score = 34.3 bits (75), Expect = 0.33
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = -2
Query: 448 YFHPTSCERRPT*QYLRPGFRQNTRS---AAGTTTRRLLSNGGGQPSYVRSLLNAFFPR 281
Y H +S + +P +Y R GF N S A T S G +P Y +L+ A FPR
Sbjct: 42 YSHSSSPQEKPVAEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPR 100
>AL357079-2|CAI16786.1| 185|Homo sapiens ST3 beta-galactoside
alpha-2,3-sialyltransferase 3 protein.
Length = 185
Score = 34.3 bits (75), Expect = 0.33
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = -2
Query: 448 YFHPTSCERRPT*QYLRPGFRQNTRS---AAGTTTRRLLSNGGGQPSYVRSLLNAFFPR 281
Y H +S + +P +Y R GF N S A T S G +P Y +L+ A FPR
Sbjct: 42 YSHSSSPQEKPVAEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPR 100
>AF425863-1|AAO13871.1| 185|Homo sapiens alpha
2,3-sialyltransferase III type D2+26 protein.
Length = 185
Score = 34.3 bits (75), Expect = 0.33
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = -2
Query: 448 YFHPTSCERRPT*QYLRPGFRQNTRS---AAGTTTRRLLSNGGGQPSYVRSLLNAFFPR 281
Y H +S + +P +Y R GF N S A T S G +P Y +L+ A FPR
Sbjct: 42 YSHSSSPQEKPVAEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPR 100
>BC004907-1|AAH04907.2| 551|Homo sapiens EPS8-like 1 protein.
Length = 551
Score = 32.3 bits (70), Expect = 1.3
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3
Query: 405 YCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEKV 557
Y R S E+ K RDV+ LEDK KV ++ + E++ KK+ E +V
Sbjct: 501 YDFQARNSSELSVKQRDVLEVLEDKEKVSELEAV-MEKQKKKVEGEVEMEV 550
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,199,131
Number of Sequences: 237096
Number of extensions: 2032560
Number of successful extensions: 4790
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4790
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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