Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_G14
         (445 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC037971-1|AAH37971.1|  856|Homo sapiens MYCBP2 protein protein.       29   7.2  
AL359257-2|CAI39759.1| 4640|Homo sapiens AC001226.5 protein.           29   7.2  
AL359257-1|CAI39758.1| 1060|Homo sapiens AC001226.5 protein.           29   7.2  
AL159158-1|CAI16842.1| 4640|Homo sapiens AC001226.5 protein.           29   7.2  
AL159154-1|CAH73736.1| 4640|Homo sapiens AC001226.5 protein.           29   7.2  
AF075587-1|AAC39928.1| 4641|Homo sapiens protein associated with...    29   7.2  
AB020723-1|BAA74939.1| 1210|Homo sapiens KIAA0916 protein protein.     29   7.2  

>BC037971-1|AAH37971.1|  856|Homo sapiens MYCBP2 protein protein.
          Length = 856

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 309 LNVAQDTCTRRHTVAHGT*RHVTSLRRRVSPSHKYTRSISII 434
           L + QD  +  HT +    R VTSL RRV P    +R  SII
Sbjct: 215 LTLLQDLFSLLHTASPRVQRQVTSLLRRVLPEVTPSRLASII 256


>AL359257-2|CAI39759.1| 4640|Homo sapiens AC001226.5 protein.
          Length = 4640

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 309  LNVAQDTCTRRHTVAHGT*RHVTSLRRRVSPSHKYTRSISII 434
            L + QD  +  HT +    R VTSL RRV P    +R  SII
Sbjct: 3999 LTLLQDLFSLLHTASPRVQRQVTSLLRRVLPEVTPSRLASII 4040


>AL359257-1|CAI39758.1| 1060|Homo sapiens AC001226.5 protein.
          Length = 1060

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 309 LNVAQDTCTRRHTVAHGT*RHVTSLRRRVSPSHKYTRSISII 434
           L + QD  +  HT +    R VTSL RRV P    +R  SII
Sbjct: 419 LTLLQDLFSLLHTASPRVQRQVTSLLRRVLPEVTPSRLASII 460


>AL159158-1|CAI16842.1| 4640|Homo sapiens AC001226.5 protein.
          Length = 4640

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 309  LNVAQDTCTRRHTVAHGT*RHVTSLRRRVSPSHKYTRSISII 434
            L + QD  +  HT +    R VTSL RRV P    +R  SII
Sbjct: 3999 LTLLQDLFSLLHTASPRVQRQVTSLLRRVLPEVTPSRLASII 4040


>AL159154-1|CAH73736.1| 4640|Homo sapiens AC001226.5 protein.
          Length = 4640

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 309  LNVAQDTCTRRHTVAHGT*RHVTSLRRRVSPSHKYTRSISII 434
            L + QD  +  HT +    R VTSL RRV P    +R  SII
Sbjct: 3999 LTLLQDLFSLLHTASPRVQRQVTSLLRRVLPEVTPSRLASII 4040


>AF075587-1|AAC39928.1| 4641|Homo sapiens protein associated with Myc
            protein.
          Length = 4641

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 309  LNVAQDTCTRRHTVAHGT*RHVTSLRRRVSPSHKYTRSISII 434
            L + QD  +  HT +    R VTSL RRV P    +R  SII
Sbjct: 4000 LTLLQDLFSLLHTASPRVQRQVTSLLRRVLPEVTPSRLASII 4041


>AB020723-1|BAA74939.1| 1210|Homo sapiens KIAA0916 protein protein.
          Length = 1210

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 309 LNVAQDTCTRRHTVAHGT*RHVTSLRRRVSPSHKYTRSISII 434
           L + QD  +  HT +    R VTSL RRV P    +R  SII
Sbjct: 569 LTLLQDLFSLLHTASPRVQRQVTSLLRRVLPEVTPSRLASII 610


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,207,850
Number of Sequences: 237096
Number of extensions: 800444
Number of successful extensions: 1994
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1994
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)