Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_G12
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 91 4e-19
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 87 9e-18
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 87 9e-18
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 87 9e-18
AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical ... 80 1e-15
U23521-6|AAC46812.1| 469|Caenorhabditis elegans Hypothetical pr... 77 7e-15
U20864-3|AAC46662.1| 574|Caenorhabditis elegans Hypothetical pr... 72 3e-13
Z49127-6|CAA88947.1| 454|Caenorhabditis elegans Hypothetical pr... 71 8e-13
AL021474-4|CAD54164.1| 445|Caenorhabditis elegans Hypothetical ... 64 5e-11
U28730-5|AAA68259.1| 470|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z54342-1|CAA91143.1| 505|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 31 0.47
AL022274-1|CAA18357.1| 349|Caenorhabditis elegans Hypothetical ... 28 4.4
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 28 5.8
U53139-5|AAK18933.2| 322|Caenorhabditis elegans Serpentine rece... 27 7.7
AL031635-11|CAA21038.3| 446|Caenorhabditis elegans Hypothetical... 27 7.7
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 91.5 bits (217), Expect = 4e-19
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Frame = +3
Query: 240 AQNLSRVP-LTDNIGFRSHAGFFTIDETYGSNLYFWYFPPFSKNKDAPVILWLQGGPGAS 416
A ++ +P +T N+ F H+G+ + T G+ L++W+ S N+ P+ILWLQGGPG +
Sbjct: 1665 ADHIFSLPGVTWNVNFMQHSGY--LQATRGNKLFYWFVESQSGNEGDPIILWLQGGPGCA 1722
Query: 417 SLFGLFIEIGPLVAGKDG--FSKRKYHWALDAHLIFIDNPVGTGFSF 551
S GLF EIGP DG + Y W AH++ ID+P G GFS+
Sbjct: 1723 STGGLFSEIGPFFVNPDGETLFENIYSWNKAAHILIIDSPRGVGFSY 1769
Score = 71.7 bits (168), Expect = 4e-13
Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Frame = +3
Query: 282 FRSHAGFFTIDETYGSNLYFWYFPPFSKNKDAPVILWLQGGPGASSLFGLFIEIGPLVAG 461
F+ ++G+ +D + G++L++W + + AP++LWL GGPG SSL GL E GP
Sbjct: 41 FKQYSGY--LDGSQGNHLHYWLVESQTNPQTAPIVLWLNGGPGCSSLLGLLSENGPYRIQ 98
Query: 462 KDGFS--KRKYHWALDAHLIFIDNPVGTGFSF 551
KDG + + W A+++F+++P GFS+
Sbjct: 99 KDGVTVIENVNSWNKAANVLFLESPRDVGFSY 130
Score = 68.5 bits (160), Expect = 3e-12
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Frame = +3
Query: 264 LTDNIGFRSHAGFFTIDETYGSNLYFWYFPPFSKNKDAPVILWLQGGPGASSLFGLFIEI 443
+T + F+ ++G+ ++ G+ L++W+ P++LWL GGPG S L + E+
Sbjct: 583 ITYGLNFKQYSGY--LNGVTGNYLHYWFVESQGNPTTDPLVLWLTGGPGCSGLMAMLTEL 640
Query: 444 GPLVAGKDG--FSKRKYHWALDAHLIFIDNPVGTGFS 548
GP DG + Y W A++IF+++P G GFS
Sbjct: 641 GPFHPNPDGKTLFENVYSWNKAANVIFLESPRGVGFS 677
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Frame = +3
Query: 246 NLSRVPLTDNIGFRSHAGFFTIDETYGSNLYFWYFPPFSKNKDAPVILWLQGGPGASSLF 425
NL + T N F+ ++G+ ++ + G+ L++W P+ILWL GGPG SS+
Sbjct: 1137 NLPGLTFTPN--FKQYSGY--LNASAGNYLHYWLVESQLNATYDPLILWLNGGPGCSSIG 1192
Query: 426 GLFIEIGPLVAGKDG--FSKRKYHWALDAHLIFIDNPVGTGFSFTRND 563
G E+GP DG + + W +++F++ P G+SF N+
Sbjct: 1193 GFLEELGPFHVNADGKTLFENTFSWNKAGNVLFLEAPRDVGYSFRSNE 1240
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 87.0 bits (206), Expect = 9e-18
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Frame = +3
Query: 249 LSRVPLTDNIGFRSHAGFFTIDETYGSNLYFWYFPPFSKNKDAPVILWLQGGPGASSLFG 428
LS LT N+ +R +G+ T DET ++L++W+ + + PV+LWL GGPG SSL G
Sbjct: 1028 LSLPGLTFNVTYRMFSGYLTADETPLNHLFYWFVESQNDPVNDPVVLWLNGGPGCSSLGG 1087
Query: 429 LFIEIGPLVAGKDG---FSKRKYHWALDAHLIFIDNPVGTGFSFTRNDQRY 572
F E+GP DG + + W A++IF++ P GFS+T + Y
Sbjct: 1088 FFTELGPFHPNDDGGQTLYENVFSWNKKANVIFLEAPAKVGFSYTEDPNYY 1138
Score = 77.4 bits (182), Expect = 7e-15
Identities = 34/96 (35%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +3
Query: 282 FRSHAGFFTIDETYGSNLYFWYFPPFSKNKDAPVILWLQGGPGASSLFGLFIEIGPLVAG 461
F+ ++GF +D G +++W + P++LWL GGPG+SSL GLF E GP
Sbjct: 1562 FKQYSGF--LDGLSGHKVHYWLVESENNPSTDPLLLWLNGGPGSSSLMGLFEENGPFRVS 1619
Query: 462 KDG--FSKRKYHWALDAHLIFIDNPVGTGFSFTRND 563
KD S+ Y W A+++++++P+G G+S+ N+
Sbjct: 1620 KDSQTLSRNPYSWNKFANVLYLESPIGVGYSYAYNN 1655
Score = 72.5 bits (170), Expect = 2e-13
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
Frame = +3
Query: 240 AQNLSRVP-LTDNIGFRSHAGFFTIDETYGSNLYFWYFPPFSKNKDAPVILWLQGGPGAS 416
A + +P LT I F ++G+ +T+ ++W+ + ++PV+LWL GGPG+S
Sbjct: 501 ADKIVNLPGLTYQINFNQYSGYLNASDTH--RFHYWFVESQNDPTNSPVLLWLNGGPGSS 558
Query: 417 SLFGLFIEIGPLVAGKDG--FSKRKYHWALDAHLIFIDNP--VGTGFSFTRNDQRY 572
SL+G+ E GP KDG + + W A+++++++P VG +S ND Y
Sbjct: 559 SLWGMLTENGPFRPNKDGQTLYENVHSWNKFANVLYLESPHQVGYSYSTVANDYTY 614
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Frame = +3
Query: 276 IGFRSHAGFFTIDETYG-SNLYFWYFPPFSKNKDAPVILWLQGGPGASSLFGLFIEIGPL 452
+ F+ +AG+ D +NL++W + ++LW+ GGPG SS+FG EIGP
Sbjct: 44 VNFKQYAGYLNSDPNKNYNNLHYWLIESQLTPSNDTLLLWINGGPGCSSVFGQIQEIGPF 103
Query: 453 VAGKDGFS--KRKYHWALDAHLIFIDNPVGTGFSFTRN 560
D + + + W ++L+ ID P G GFS+ +N
Sbjct: 104 HVSSDSQTVYENVFAWNKVSNLLAIDGP-GAGFSWQQN 140
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 87.0 bits (206), Expect = 9e-18
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Frame = +3
Query: 249 LSRVPLTDNIGFRSHAGFFTIDETYGSNLYFWYFPPFSKNKDAPVILWLQGGPGASSLFG 428
LS LT N+ +R +G+ T DET ++L++W+ + + PV+LWL GGPG SSL G
Sbjct: 1028 LSLPGLTFNVTYRMFSGYLTADETPLNHLFYWFVESQNDPVNDPVVLWLNGGPGCSSLGG 1087
Query: 429 LFIEIGPLVAGKDG---FSKRKYHWALDAHLIFIDNPVGTGFSFTRNDQRY 572
F E+GP DG + + W A++IF++ P GFS+T + Y
Sbjct: 1088 FFTELGPFHPNDDGGQTLYENVFSWNKKANVIFLEAPAKVGFSYTEDPNYY 1138
Score = 77.4 bits (182), Expect = 7e-15
Identities = 34/96 (35%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +3
Query: 282 FRSHAGFFTIDETYGSNLYFWYFPPFSKNKDAPVILWLQGGPGASSLFGLFIEIGPLVAG 461
F+ ++GF +D G +++W + P++LWL GGPG+SSL GLF E GP
Sbjct: 1562 FKQYSGF--LDGLSGHKVHYWLVESENNPSTDPLLLWLNGGPGSSSLMGLFEENGPFRVS 1619
Query: 462 KDG--FSKRKYHWALDAHLIFIDNPVGTGFSFTRND 563
KD S+ Y W A+++++++P+G G+S+ N+
Sbjct: 1620 KDSQTLSRNPYSWNKFANVLYLESPIGVGYSYAYNN 1655
Score = 72.5 bits (170), Expect = 2e-13
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
Frame = +3
Query: 240 AQNLSRVP-LTDNIGFRSHAGFFTIDETYGSNLYFWYFPPFSKNKDAPVILWLQGGPGAS 416
A + +P LT I F ++G+ +T+ ++W+ + ++PV+LWL GGPG+S
Sbjct: 501 ADKIVNLPGLTYQINFNQYSGYLNASDTH--RFHYWFVESQNDPTNSPVLLWLNGGPGSS 558
Query: 417 SLFGLFIEIGPLVAGKDG--FSKRKYHWALDAHLIFIDNP--VGTGFSFTRNDQRY 572
SL+G+ E GP KDG + + W A+++++++P VG +S ND Y
Sbjct: 559 SLWGMLTENGPFRPNKDGQTLYENVHSWNKFANVLYLESPHQVGYSYSTVANDYTY 614
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Frame = +3
Query: 276 IGFRSHAGFFTIDETYG-SNLYFWYFPPFSKNKDAPVILWLQGGPGASSLFGLFIEIGPL 452
+ F+ +AG+ D +NL++W + ++LW+ GGPG SS+FG EIGP
Sbjct: 44 VNFKQYAGYLNSDPNKNYNNLHYWLIESQLTPSNDTLLLWINGGPGCSSVFGQIQEIGPF 103
Query: 453 VAGKDGFS--KRKYHWALDAHLIFIDNPVGTGFSFTRN 560
D + + + W ++L+ ID P G GFS+ +N
Sbjct: 104 HVSSDSQTVYENVFAWNKVSNLLAIDGP-GAGFSWQQN 140
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 87.0 bits (206), Expect = 9e-18
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Frame = +3
Query: 249 LSRVPLTDNIGFRSHAGFFTIDETYGSNLYFWYFPPFSKNKDAPVILWLQGGPGASSLFG 428
LS LT N+ +R +G+ T DET ++L++W+ + + PV+LWL GGPG SSL G
Sbjct: 1028 LSLPGLTFNVTYRMFSGYLTADETPLNHLFYWFVESQNDPVNDPVVLWLNGGPGCSSLGG 1087
Query: 429 LFIEIGPLVAGKDG---FSKRKYHWALDAHLIFIDNPVGTGFSFTRNDQRY 572
F E+GP DG + + W A++IF++ P GFS+T + Y
Sbjct: 1088 FFTELGPFHPNDDGGQTLYENVFSWNKKANVIFLEAPAKVGFSYTEDPNYY 1138
Score = 77.4 bits (182), Expect = 7e-15
Identities = 34/96 (35%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +3
Query: 282 FRSHAGFFTIDETYGSNLYFWYFPPFSKNKDAPVILWLQGGPGASSLFGLFIEIGPLVAG 461
F+ ++GF +D G +++W + P++LWL GGPG+SSL GLF E GP
Sbjct: 1562 FKQYSGF--LDGLSGHKVHYWLVESENNPSTDPLLLWLNGGPGSSSLMGLFEENGPFRVS 1619
Query: 462 KDG--FSKRKYHWALDAHLIFIDNPVGTGFSFTRND 563
KD S+ Y W A+++++++P+G G+S+ N+
Sbjct: 1620 KDSQTLSRNPYSWNKFANVLYLESPIGVGYSYAYNN 1655
Score = 72.5 bits (170), Expect = 2e-13
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
Frame = +3
Query: 240 AQNLSRVP-LTDNIGFRSHAGFFTIDETYGSNLYFWYFPPFSKNKDAPVILWLQGGPGAS 416
A + +P LT I F ++G+ +T+ ++W+ + ++PV+LWL GGPG+S
Sbjct: 501 ADKIVNLPGLTYQINFNQYSGYLNASDTH--RFHYWFVESQNDPTNSPVLLWLNGGPGSS 558
Query: 417 SLFGLFIEIGPLVAGKDG--FSKRKYHWALDAHLIFIDNP--VGTGFSFTRNDQRY 572
SL+G+ E GP KDG + + W A+++++++P VG +S ND Y
Sbjct: 559 SLWGMLTENGPFRPNKDGQTLYENVHSWNKFANVLYLESPHQVGYSYSTVANDYTY 614
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Frame = +3
Query: 276 IGFRSHAGFFTIDETYG-SNLYFWYFPPFSKNKDAPVILWLQGGPGASSLFGLFIEIGPL 452
+ F+ +AG+ D +NL++W + ++LW+ GGPG SS+FG EIGP
Sbjct: 44 VNFKQYAGYLNSDPNKNYNNLHYWLIESQLTPSNDTLLLWINGGPGCSSVFGQIQEIGPF 103
Query: 453 VAGKDGFS--KRKYHWALDAHLIFIDNPVGTGFSFTRN 560
D + + + W ++L+ ID P G GFS+ +N
Sbjct: 104 HVSSDSQTVYENVFAWNKVSNLLAIDGP-GAGFSWQQN 140
>AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical
protein Y40D12A.2 protein.
Length = 512
Score = 80.2 bits (189), Expect = 1e-15
Identities = 40/121 (33%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Frame = +3
Query: 198 LILTPYLEKGSISLAQNLSRVP-LTDNIGFRSHAGFFTIDETYGSNLYFWYFPPFSKNKD 374
L +T + + Q ++ +P LT+ + + +AG+ +I + L++WY +
Sbjct: 5 LFITLFALGSTAPADQQITSLPNLTEPLRSKHYAGYLSISDV--KQLFYWYVESEESPET 62
Query: 375 APVILWLQGGPGASSLFGLFIEIGPLVAGKDG--FSKRKYHWALDAHLIFIDNPVGTGFS 548
APV+LWL GGPG +S+ GLFIE+GP G ++ + W A++I++D P G GFS
Sbjct: 63 APVVLWLNGGPGCASMEGLFIEMGPFRVRNYGEEVNRNPWTWNRIANIIYLDAPAGVGFS 122
Query: 549 F 551
+
Sbjct: 123 Y 123
>U23521-6|AAC46812.1| 469|Caenorhabditis elegans Hypothetical
protein F41C3.5 protein.
Length = 469
Score = 77.4 bits (182), Expect = 7e-15
Identities = 34/92 (36%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Frame = +3
Query: 282 FRSHAGFFTIDETYGSNLYFWYFPPFSKNKDAPVILWLQGGPGASSLFGLFIEIGPLVAG 461
F+ ++GFF + + + L++W+ ++ + P+I W GGPG SSL GL E+GP VA
Sbjct: 31 FKHYSGFFQVSDNHV--LHYWFVESQNEPSNDPLIFWFNGGPGCSSLDGLLNEMGPYVAN 88
Query: 462 KDGFSKR--KYHWALDAHLIFIDNPVGTGFSF 551
+DG + R +Y W A +++I++P G G+S+
Sbjct: 89 EDGKTLRENEYSWNKMASVVYIESPAGVGYSY 120
>U20864-3|AAC46662.1| 574|Caenorhabditis elegans Hypothetical
protein F32A5.3 protein.
Length = 574
Score = 72.1 bits (169), Expect = 3e-13
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Frame = +3
Query: 186 IGEPLILTPYLEKGSISLAQNLSRVPLTDNIGFRSHAGFFTIDETYGSNLYFWYFPPFSK 365
+G ++ L +G L QNL + N F+S++G+ + +++ S
Sbjct: 6 LGVAFLVVTVLSQGEKDLIQNLPGLLFKAN--FKSYSGYVDANANGTWKMHYMLTESRSN 63
Query: 366 NKDAPVILWLQGGPGASSLFGLFIEIGPLVAGKDG--FSKRKYHWALDAHLIFIDNPVGT 539
P+++W GGPG SSL GLF E+GP DG + Y W A+++++++P+G
Sbjct: 64 PDTDPLLVWFNGGPGCSSLGGLFEELGPFYVNFDGQTLYENPYAWNAKANVLYLESPIGV 123
Query: 540 GFSFTRNDQRY 572
G+S+ Y
Sbjct: 124 GYSYDTTTPGY 134
>Z49127-6|CAA88947.1| 454|Caenorhabditis elegans Hypothetical
protein F13D12.6 protein.
Length = 454
Score = 70.5 bits (165), Expect = 8e-13
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Frame = +3
Query: 234 SLAQNLSRVPLTDNIGFRSHAGFFTIDETYGSNLYFWYFPPFSKNKDAPVILWLQGGPGA 413
+L NL P+++ F+ ++G++ + L++W+ S PV+LWL GGPG
Sbjct: 22 ALITNLPGAPISN---FKQYSGYYNVGTKKNHMLHYWFVESQSNPSTDPVLLWLTGGPGC 78
Query: 414 SSLFGLFIEIGPLVAGKDGFSKR--KYHWALDAHLIFIDNPVGTGFSFTRND 563
S L L E GP DG + R Y W +A ++ ++ P G G+S+ ++
Sbjct: 79 SGLSALLTEWGPWNVNTDGATLRTNPYSWNKNASILTLEAPAGVGYSYATDN 130
>AL021474-4|CAD54164.1| 445|Caenorhabditis elegans Hypothetical
protein Y32F6A.5 protein.
Length = 445
Score = 64.5 bits (150), Expect = 5e-11
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +3
Query: 309 IDETYGSNLYFWYFPPFSKNKDAPVILWLQGGPGASSL-FGLFIEIGPLVAGKDGFSKRK 485
+D ++ ++W + N P+ LWLQGGPG+SS FG F E GP S
Sbjct: 37 VDIRTNAHTFWWLYAAKPANSQRPLFLWLQGGPGSSSSGFGNFEETGPKTLNG---SDNP 93
Query: 486 YHWALDAHLIFIDNPVGTGFSFTRNDQRY 572
W A ++++DNPVG GFS+ + Y
Sbjct: 94 ATWLQVADMVYVDNPVGAGFSYVDDKSAY 122
>U28730-5|AAA68259.1| 470|Caenorhabditis elegans Hypothetical
protein K10B2.2a protein.
Length = 470
Score = 62.1 bits (144), Expect = 3e-10
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Frame = +3
Query: 333 LYFWYFPPFSKNKDAPVILWLQGGPGASSLFGLFIEIGPLVAGKDGFS--KRKYHWALDA 506
L++W P++LWL GGPG SSL GL E+GP G S +Y W A
Sbjct: 53 LHYWLTESSRAPTQDPLVLWLNGGPGCSSLDGLIEELGPFHVKDFGNSIYYNEYAWNKFA 112
Query: 507 HLIFIDNPVGTGFSFTRN 560
+++F+++P G G+S++ N
Sbjct: 113 NVLFLESPAGVGYSYSTN 130
>Z54342-1|CAA91143.1| 505|Caenorhabditis elegans Hypothetical
protein C08H9.1 protein.
Length = 505
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 372 DAPVILWLQGGPGASSLFGLFIEIGPLVAGKDGFS--KRKYHWALDAHLIFIDNPVGTGF 545
+A +I+W GGPG SSL F E GPL G S + + W A+++F+++P+G GF
Sbjct: 66 EASLIIWFNGGPGCSSLSAFFEEFGPLYVNFGGKSLFENVHSWYHKANILFLESPIGVGF 125
Query: 546 SFTRNDQRYCK 578
S+ + K
Sbjct: 126 SYDTEQSNFTK 136
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 31.5 bits (68), Expect = 0.47
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -2
Query: 541 PVPTGLSIKIRCASNAQ*YFRLEKPSFPATRGPISINKPNNELAP-GPPCNHSITGASL 368
P+PT L I S Q F KPS PA GP +P P GPP + S G+ +
Sbjct: 529 PLPTDLPIPSESPSFFQWIFGRPKPSGPA--GPAPSGEPPGPFDPSGPPPSESSEGSGI 585
>AL022274-1|CAA18357.1| 349|Caenorhabditis elegans Hypothetical
protein H24D24.1 protein.
Length = 349
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = -3
Query: 477 WKNHPSLLLEVLFQ*ISQITSLLLVRPATTVSQVRLYFLKTVE-NTKSKDLNHKFR 313
++N LL+E +F + I S++L P T+ V +YFLKT++ +T S + NH R
Sbjct: 213 YQNETLLLVEGIF--FTLIPSIIL--PIVTI--VLIYFLKTMKRSTASNNNNHNAR 262
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -2
Query: 472 KPSFPATRGPISINKPNNELAPGPPCNHSITGASLFFENG 353
+P +P GP+ P N + P PP + + + NG
Sbjct: 808 RPPYPYPGGPVPPGPPQNRMPPPPPAQGAPSPSGAAGSNG 847
>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
protein F52G3.1 protein.
Length = 1172
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 421 NELAPGPPCNHSITGASLFFENG 353
N LA PP N+S G+ FF NG
Sbjct: 941 NSLAGTPPANYSSNGSYGFFNNG 963
>U53139-5|AAK18933.2| 322|Caenorhabditis elegans Serpentine
receptor, class xa protein4 protein.
Length = 322
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 68 PLQ*IINNISGIFHIKFTRKFVY--ICKYLSTIKIGHE 175
P+ + N+S I +IKF+RKF+ I L+TIK +E
Sbjct: 190 PVSAVTVNVSMILYIKFSRKFIKKPISLSLTTIKRENE 227
>AL031635-11|CAA21038.3| 446|Caenorhabditis elegans Hypothetical
protein Y47D3B.3 protein.
Length = 446
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = +3
Query: 48 TYKMIVVHFN-KLLIISVVF----STLSLHGNSFIFANIYPRLKLDTNS 179
T+ +IV FN LL+ + + +TLSL SF F +I+P L + S
Sbjct: 52 TFAIIVSFFNFSLLLFNHTYISHYATLSLSSFSFFFRHIFPHLPQQSTS 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,835,868
Number of Sequences: 27780
Number of extensions: 307710
Number of successful extensions: 824
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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