Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_G01
(643 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 184 7e-47
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 181 4e-46
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 177 8e-45
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 174 6e-44
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 171 4e-43
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 166 1e-41
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 114 6e-26
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 87 1e-17
12_02_0977 + 24999211-25000275,25000375-25000521,25000805-25001179 31 0.78
02_01_0167 - 1159231-1159263,1159348-1159419,1159957-1160052,116... 31 0.78
10_07_0160 - 13656172-13656476,13656799-13657528 29 2.4
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 29 2.4
04_04_0050 - 22360294-22361804,22362087-22362378,22363367-223634... 29 3.1
10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097 29 4.1
03_01_0522 - 3919120-3919696,3919835-3919919,3919955-3919985,392... 29 4.1
03_05_0696 - 26856413-26856416,26857917-26858524,26859041-268591... 28 5.5
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 27 9.6
05_03_0513 + 14919136-14920881 27 9.6
04_01_0275 + 3648866-3649951 27 9.6
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 184 bits (447), Expect = 7e-47
Identities = 89/139 (64%), Positives = 109/139 (78%), Gaps = 2/139 (1%)
Frame = +3
Query: 231 EERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYD 404
EERNLLSVAYKNV+GARR+SWR+ISSIEQK E G+E + + KEYR K+E EL +IC
Sbjct: 265 EERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDG 324
Query: 405 VLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVQDSQKAYQDAFEIS 584
+L LLD HL+P ++ PESKVFYLKMKGDYYRYLAE TG R +++ AY+ A +I+
Sbjct: 325 ILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIA 384
Query: 585 KAKMQPTHPIRLGLALNFS 641
A++ PTHPIRLGLALNFS
Sbjct: 385 LAELPPTHPIRLGLALNFS 403
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 101 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET 211
S + +EE V AKLAEQAERY++M M++V +T
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKT 256
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 181 bits (441), Expect = 4e-46
Identities = 87/139 (62%), Positives = 109/139 (78%), Gaps = 2/139 (1%)
Frame = +3
Query: 231 EERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYD 404
EERNLLSVAYKNV+GARR+SWR+ISSIEQK E G+E + + K+YR K+E EL +IC
Sbjct: 47 EERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDG 106
Query: 405 VLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVQDSQKAYQDAFEIS 584
+L LL+ HL+P ++ PESKVFYLKMKGDYYRYLAE TG R +++ AY+ A +I+
Sbjct: 107 ILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIA 166
Query: 585 KAKMQPTHPIRLGLALNFS 641
A++ PTHPIRLGLALNFS
Sbjct: 167 LAELPPTHPIRLGLALNFS 185
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +2
Query: 101 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET 211
S+ + +EE V AKLAEQAERY++M M++V +T
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKT 38
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 177 bits (430), Expect = 8e-45
Identities = 86/139 (61%), Positives = 105/139 (75%), Gaps = 2/139 (1%)
Frame = +3
Query: 231 EERNLLSVAYKNVVGARRSSWRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYD 404
EERNLLSVAYKNV+GARR+SWR++SSIEQK EG +E + KEYR K+E EL +IC
Sbjct: 41 EERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDG 100
Query: 405 VLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVQDSQKAYQDAFEIS 584
+L LLD HL+P ++ ESKVFYLKMKGDY+RYLAE TG R + + AY+ A +I+
Sbjct: 101 ILKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIA 160
Query: 585 KAKMQPTHPIRLGLALNFS 641
A + PTHPIRLGLALNFS
Sbjct: 161 LADLAPTHPIRLGLALNFS 179
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +2
Query: 116 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET 211
+ +EE V AKLAEQAERY++M M++V +T
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKT 32
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 174 bits (423), Expect = 6e-44
Identities = 85/139 (61%), Positives = 101/139 (72%), Gaps = 2/139 (1%)
Frame = +3
Query: 231 EERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKELREICYD 404
EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A + YR K+E EL IC
Sbjct: 24 EERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAELARICDG 83
Query: 405 VLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVQDSQKAYQDAFEIS 584
+L LLD HL+P A ESKVFYLKMKGDY+RYLAE +G+ R + + AY+ A +I+
Sbjct: 84 ILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIA 143
Query: 585 KAKMQPTHPIRLGLALNFS 641
A + PTHPIRLGLALNFS
Sbjct: 144 LADLAPTHPIRLGLALNFS 162
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 171 bits (416), Expect = 4e-43
Identities = 85/139 (61%), Positives = 104/139 (74%), Gaps = 2/139 (1%)
Frame = +3
Query: 231 EERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYD 404
EERNLLSVAYKNV+GARR+SWR+ISSIEQK E G+E KEYR ++E EL +IC
Sbjct: 46 EERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDG 105
Query: 405 VLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVQDSQKAYQDAFEIS 584
+L LLD HL+P A+ ESKVFYLKMKGDY+RYLAE +G R +++ AY+ A +I+
Sbjct: 106 ILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIA 165
Query: 585 KAKMQPTHPIRLGLALNFS 641
A + THPIRLGLALNFS
Sbjct: 166 LADLPTTHPIRLGLALNFS 184
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 104 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET 211
S +EE V AKLAEQAERY++M M++V +T
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKT 37
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 166 bits (404), Expect = 1e-41
Identities = 82/139 (58%), Positives = 101/139 (72%), Gaps = 2/139 (1%)
Frame = +3
Query: 231 EERNLLSVAYKNVVGARRSSWRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYD 404
EERNLLSVAYKNV+GARR+SWR++SSIEQK EG + A+ YR +VE EL IC
Sbjct: 51 EERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAG 110
Query: 405 VLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVQDSQKAYQDAFEIS 584
+L LLD+ L+P A+ ++KVFYLKMKGDY+RYLAE TG R + AYQ A +I+
Sbjct: 111 ILRLLDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIA 170
Query: 585 KAKMQPTHPIRLGLALNFS 641
++ PTHPIRLGLALNFS
Sbjct: 171 MKELSPTHPIRLGLALNFS 189
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2
Query: 122 KEELVQRAKLAEQAERYDDMAAAMKEV 202
+EE+V AKLAEQAERY++M M++V
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKV 36
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 114 bits (274), Expect = 6e-26
Identities = 52/112 (46%), Positives = 73/112 (65%)
Frame = +3
Query: 231 EERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVL 410
EER L SV +K +GARR+SWR++ S+EQK ++ Y+ KVE ELR +C +VL
Sbjct: 40 EERLLFSVGFKKTIGARRASWRILESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVL 99
Query: 411 CLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVQDSQKAYQ 566
++ H +P A++ E+ VF+ KMKGDYYRYLAE +TG + + S AYQ
Sbjct: 100 SIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQ 151
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +2
Query: 119 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVEL 223
++E++V+ AKLAEQAERYDDM MK + V++
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDM 37
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 86.6 bits (205), Expect = 1e-17
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 2/114 (1%)
Frame = +3
Query: 231 EERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMAKEYRVKVEKELREICYD 404
EERNLLSV YKN++GA+R++ R+I SIE ++T+G E + EYR KVE E+ +IC D
Sbjct: 18 EERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQTAEYRRKVEAEMDKICCD 77
Query: 405 VLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVQDSQKAYQ 566
V+ ++DK KGDYYRYLAE TG + V + S AY+
Sbjct: 78 VINIIDK------------------KGDYYRYLAEFKTGTEKIEVSELSLNAYE 113
>12_02_0977 + 24999211-25000275,25000375-25000521,25000805-25001179
Length = 528
Score = 31.1 bits (67), Expect = 0.78
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +3
Query: 411 CLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETR-HSV----VQDSQKAYQDAF 575
C+L+ +I + +PES++ L + +A VA TR S+ +Q A DA
Sbjct: 252 CVLEPGMIERVLHPESEIRELAIHSAMGGTIAVVAAAATRLRSLRMFNIQVGTVAVDDAV 311
Query: 576 EISKAKMQPTHPIRLGL 626
E+ M+ T P R+ +
Sbjct: 312 ELRNLHMRDTRPSRIAI 328
>02_01_0167 -
1159231-1159263,1159348-1159419,1159957-1160052,
1160248-1160358,1160768-1160800,1160963-1161076
Length = 152
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 211 RRRAHATKKETFFPLLIKMWSAPDGHH-GESFPLLNRKPKGRKENNRWQ 354
R R +E PLL+++++ GHH E F + ++PK + W+
Sbjct: 28 RARVEPVDREKTCPLLLRVFTKVGGHHQNEEFAVRGKEPKDEVQIYTWK 76
>10_07_0160 - 13656172-13656476,13656799-13657528
Length = 344
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -2
Query: 240 FFLRCMSSTPVSVTSFIAAAMSSYRSACSANLARCTSS----SLSTDIVDDG 97
FFL +S P SV+S +++ +S S C + C +S SLS+ + DG
Sbjct: 54 FFLSLLSPLPASVSSSLSSPLSISPSICRSARLLCPNSTYFQSLSSTVFIDG 105
>07_03_1647 +
28370226-28370369,28370452-28370611,28370704-28370831,
28372512-28372628,28372729-28372782,28372985-28373075,
28373517-28373688,28374452-28374573,28374726-28374817,
28375331-28375373,28375596-28375656,28376367-28376515,
28376659-28376729,28376805-28376975,28377056-28377124,
28377427-28377528,28377629-28377697,28378060-28378138,
28378238-28378337,28378438-28378513,28378715-28378894,
28379430-28379552,28379634-28379717,28380068-28380252,
28380339-28380477,28380585-28380644,28380926-28381030,
28381332-28381445
Length = 1019
Score = 29.5 bits (63), Expect = 2.4
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = +3
Query: 228 NEERNLLSVAYKNVVGARRSSW-RVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYD 404
N + LLS AY N+ W + ISS+ Q+ S ++ Y+ + K L +
Sbjct: 291 NTKNALLSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAG--SEIYQESLVKALTKHFGA 348
Query: 405 VLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEV-ATG 521
L ++D L+ + +SK KGD RY+ V +TG
Sbjct: 349 KLLIIDPSLLASGQSSKSKESESYKKGDRVRYIGSVQSTG 388
>04_04_0050 -
22360294-22361804,22362087-22362378,22363367-22363420,
22363627-22363718,22364713-22364915,22365892-22366133,
22366205-22366330,22366800-22366907,22367394-22367457,
22367543-22367681,22367867-22368038,22368198-22368482
Length = 1095
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -2
Query: 165 SACSANLARCTSSSLSTDIVDDGRY*FH*CPCWKGKTVIN*QIAKLFRFFSCASC 1
S C A+ +CT L ++ +DG CP + + +F+ F CA C
Sbjct: 350 SPCHADKDQCTQPDLVEEVFEDG------CPSLSRRLDSEYPVRNMFKLFICAIC 398
>10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097
Length = 214
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 337 LSDPSVFCSIEEMTRHDDRRAPTTFL*ATERR 242
L+D S CSI ++TR D + A T TER+
Sbjct: 154 LADKSTGCSIRKITRSDKKPAKTRSFVETERK 185
>03_01_0522 -
3919120-3919696,3919835-3919919,3919955-3919985,
3920078-3920158,3920271-3920338,3920645-3920698,
3921023-3922379
Length = 750
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 583 LISKASWYAFCESCTT 536
++S SW AFCESC T
Sbjct: 500 MVSCTSWLAFCESCQT 515
>03_05_0696 -
26856413-26856416,26857917-26858524,26859041-26859101,
26859181-26859557,26860314-26861156
Length = 630
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/35 (28%), Positives = 23/35 (65%)
Frame = -1
Query: 244 RFLSSLHELDAGFRHFLHRGRHVIISFSLLSQLGA 140
+ ++ L E+D ++H+ H+ + V+ SF +++ GA
Sbjct: 274 KLMAMLDEVDRKYKHYYHQMQIVVSSFDMVAGSGA 308
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = +3
Query: 381 ELREICYDVLCLLDKHLIPKASNPES-----KVFYLKMKG 485
+LRE+ YD+ LD+ L+ A+ P S K+ K+KG
Sbjct: 71 DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110
>05_03_0513 + 14919136-14920881
Length = 581
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -2
Query: 216 TPVSVTSFIAAAMSSYRSACSANLARCTSSSLSTDIVDDG 97
+PVSV F + SS + S++ + +SSS +D DDG
Sbjct: 401 SPVSVNKFPDSPRSSSSGSSSSSSSGSSSSSSESDSDDDG 440
>04_01_0275 + 3648866-3649951
Length = 361
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 282 RSSWRVISSIEQKTEGSERKQQMAKEYR--VKVEKELREICYDVL 410
R SW +ISS+ +K E + Y ++V ++R++ +D +
Sbjct: 19 RRSWMLISSLGKKLASEEEWMEYEYHYSRGIRVSPDIRKVLFDCI 63
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,504,518
Number of Sequences: 37544
Number of extensions: 390386
Number of successful extensions: 1088
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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