Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_G01
(643 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 241 3e-64
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 241 3e-64
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 226 1e-59
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 224 4e-59
Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 31 0.70
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 31 0.70
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 31 0.70
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 31 0.70
U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical pr... 29 3.7
U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated p... 29 3.7
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 29 3.7
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 28 4.9
Z78062-5|CAB01500.1| 516|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z47357-2|CAD54175.1| 464|Caenorhabditis elegans Hypothetical pr... 28 6.5
U88180-12|AAO21402.1| 476|Caenorhabditis elegans Hypothetical p... 28 6.5
U88180-11|AAO21401.1| 566|Caenorhabditis elegans Hypothetical p... 28 6.5
U88180-10|AAO21403.1| 532|Caenorhabditis elegans Hypothetical p... 28 6.5
U88180-9|AAM22071.1| 517|Caenorhabditis elegans Hypothetical pr... 28 6.5
U88180-8|AAB42296.1| 607|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL021571-7|CAA16515.1| 516|Caenorhabditis elegans Hypothetical ... 28 6.5
Z49127-5|CAA88945.1| 421|Caenorhabditis elegans Hypothetical pr... 27 8.6
U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 241 bits (590), Expect = 3e-64
Identities = 117/138 (84%), Positives = 128/138 (92%)
Frame = +3
Query: 228 NEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDV 407
NEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQMAKEYR KVEKELR+IC DV
Sbjct: 40 NEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDV 99
Query: 408 LCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVQDSQKAYQDAFEISK 587
L LLDK LIPKA ESKVFYLKMKGDYYRYLAEVA+G+ R+SVV+ SQ++YQ+AF+I+K
Sbjct: 100 LNLLDKFLIPKAGAAESKVFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAK 159
Query: 588 AKMQPTHPIRLGLALNFS 641
KMQPTHPIRLGLALNFS
Sbjct: 160 DKMQPTHPIRLGLALNFS 177
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +2
Query: 110 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELMQRRK 238
MS KEELV RAKLAEQAERYDDMAA+MK+VTE G EL +
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEER 43
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 241 bits (590), Expect = 3e-64
Identities = 117/138 (84%), Positives = 128/138 (92%)
Frame = +3
Query: 228 NEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDV 407
NEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQMAKEYR KVEKELR+IC DV
Sbjct: 40 NEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDV 99
Query: 408 LCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVQDSQKAYQDAFEISK 587
L LLDK LIPKA ESKVFYLKMKGDYYRYLAEVA+G+ R+SVV+ SQ++YQ+AF+I+K
Sbjct: 100 LNLLDKFLIPKAGAAESKVFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAK 159
Query: 588 AKMQPTHPIRLGLALNFS 641
KMQPTHPIRLGLALNFS
Sbjct: 160 DKMQPTHPIRLGLALNFS 177
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +2
Query: 110 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELMQRRK 238
MS KEELV RAKLAEQAERYDDMAA+MK+VTE G EL +
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEER 43
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 226 bits (552), Expect = 1e-59
Identities = 113/138 (81%), Positives = 124/138 (89%)
Frame = +3
Query: 228 NEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDV 407
NEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQ+AKEYRVKVE+EL +IC DV
Sbjct: 40 NEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDV 99
Query: 408 LCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVQDSQKAYQDAFEISK 587
L LLD+ LI KA ESKVFYLKMKGDYYRYLAEVA+ E R +VV+ SQKAYQ+A +I+K
Sbjct: 100 LKLLDEFLIVKAGAAESKVFYLKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAK 158
Query: 588 AKMQPTHPIRLGLALNFS 641
KMQPTHPIRLGLALNFS
Sbjct: 159 DKMQPTHPIRLGLALNFS 176
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = +2
Query: 110 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELMQRRK 238
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G EL +
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEER 43
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 224 bits (548), Expect = 4e-59
Identities = 112/138 (81%), Positives = 123/138 (89%)
Frame = +3
Query: 228 NEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDV 407
NEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQ+AKEYRVKVE+EL +IC DV
Sbjct: 40 NEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDV 99
Query: 408 LCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVQDSQKAYQDAFEISK 587
L LLD+ LI KA ESK FYLKMKGDYYRYLAEVA+ E R +VV+ SQKAYQ+A +I+K
Sbjct: 100 LKLLDEFLIVKAGAAESKAFYLKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAK 158
Query: 588 AKMQPTHPIRLGLALNFS 641
KMQPTHPIRLGLALNFS
Sbjct: 159 DKMQPTHPIRLGLALNFS 176
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = +2
Query: 110 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELMQRRK 238
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G EL +
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEER 43
>Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical
protein M117.3 protein.
Length = 125
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +3
Query: 477 MKGDYYRYLAEVATGETRHSVVQDSQKAYQDAFEISKAKMQPTHPIRLGLALNFS 641
M D++RYL + R S+ AYQ+A I+K KMQPTHPIRLGLALN S
Sbjct: 1 MVADHFRYLVQY-DDINREEHAHKSRIAYQEALGIAKDKMQPTHPIRLGLALNAS 54
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 402 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 518
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1214 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1253
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 402 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 518
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1553 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1592
>Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical
protein ZK524.2c protein.
Length = 1475
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 402 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 518
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 873 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 912
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 402 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 518
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1211 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1250
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 402 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 518
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1214 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1253
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 402 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 518
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1553 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1592
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 402 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 518
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1211 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1250
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 402 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 518
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1214 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1253
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 402 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 518
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1553 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1592
>Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical
protein ZK524.2c protein.
Length = 1475
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 402 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 518
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 873 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 912
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 402 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 518
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1211 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1250
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 402 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 518
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1214 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1253
>U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical
protein C15H9.2 protein.
Length = 265
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -1
Query: 349 ICCFLSDPSVFCSIEEMTRHDDRRAPTTFL*ATERRFLSSLHELDAGFRH 200
I +S+ + FCSI+ + D ++ +TF ER S +HE G RH
Sbjct: 50 IFTLISEMAEFCSIDLIIHCTDFKSSSTFTSQFERSGESVVHEWLPGGRH 99
>U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated
protein 2, isoform a protein.
Length = 1538
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/103 (18%), Positives = 40/103 (38%)
Frame = +3
Query: 162 LNDMMTWXXXXXXXXXXASSSCNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERK 341
LN + W + EE+ + A + + S E + + E +
Sbjct: 290 LNGYLEWILTAEEVILKEDRTTEEEKAAIMEARRRAANKKLKQASKQQSTETEEDFEEDE 349
Query: 342 QQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESKVFY 470
+M +EY + E++ R C+ V + + I ++++FY
Sbjct: 350 DEMEEEYVDEAERKKRGCCHSVGKFIKQLRIQIRIMVKTQIFY 392
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/103 (18%), Positives = 40/103 (38%)
Frame = +3
Query: 162 LNDMMTWXXXXXXXXXXASSSCNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERK 341
LN + W + EE+ + A + + S E + + E +
Sbjct: 290 LNGYLEWILTAEEVILKEDRTTEEEKAAIMEARRRAANKKLKQASKQQSTETEEDFEEDE 349
Query: 342 QQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESKVFY 470
+M +EY + E++ R C+ V + + I ++++FY
Sbjct: 350 DEMEEEYVDEAERKKRGCCHSVGKFIKQLRIQIRIMVKTQIFY 392
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +3
Query: 255 AYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREI 395
A K+ + A++ R+ ++K E ERK++ +E + + E+E+REI
Sbjct: 984 AEKDRIEAKKFEERMKKE-QEKQEEKERKEREKREEKERKEREIREI 1029
>Z78062-5|CAB01500.1| 516|Caenorhabditis elegans Hypothetical
protein F16D3.7 protein.
Length = 516
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -1
Query: 607 CVGCILALLISKASWYAFCESCTTECLVS 521
C GC+ + I ASW +C S + S
Sbjct: 367 CSGCVPPIAIDVASWLGYCNSMLNPIIYS 395
>Z47357-2|CAD54175.1| 464|Caenorhabditis elegans Hypothetical
protein ZK1128.2b protein.
Length = 464
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 261 KNVVGARRSSWRVISSIEQKTEGSERKQQMAKE 359
KNV+GAR+ +W+ I+ T+G E+ ++A E
Sbjct: 100 KNVIGARQFNWKFIA-----TDGDEKSVRVAHE 127
>U88180-12|AAO21402.1| 476|Caenorhabditis elegans Hypothetical
protein T27A3.1d protein.
Length = 476
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 110 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELM 226
+S++KEE+ A L E +R+D M A KE+ + ELM
Sbjct: 193 ISMEKEEM--GAILIEMIQRHDTMQAEHKEMQDQYAELM 229
>U88180-11|AAO21401.1| 566|Caenorhabditis elegans Hypothetical
protein T27A3.1c protein.
Length = 566
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 110 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELM 226
+S++KEE+ A L E +R+D M A KE+ + ELM
Sbjct: 193 ISMEKEEM--GAILIEMIQRHDTMQAEHKEMQDQYAELM 229
>U88180-10|AAO21403.1| 532|Caenorhabditis elegans Hypothetical
protein T27A3.1e protein.
Length = 532
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 110 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELM 226
+S++KEE+ A L E +R+D M A KE+ + ELM
Sbjct: 234 ISMEKEEM--GAILIEMIQRHDTMQAEHKEMQDQYAELM 270
>U88180-9|AAM22071.1| 517|Caenorhabditis elegans Hypothetical
protein T27A3.1b protein.
Length = 517
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 110 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELM 226
+S++KEE+ A L E +R+D M A KE+ + ELM
Sbjct: 234 ISMEKEEM--GAILIEMIQRHDTMQAEHKEMQDQYAELM 270
>U88180-8|AAB42296.1| 607|Caenorhabditis elegans Hypothetical
protein T27A3.1a protein.
Length = 607
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 110 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELM 226
+S++KEE+ A L E +R+D M A KE+ + ELM
Sbjct: 234 ISMEKEEM--GAILIEMIQRHDTMQAEHKEMQDQYAELM 270
>AL021571-7|CAA16515.1| 516|Caenorhabditis elegans Hypothetical
protein F16D3.7 protein.
Length = 516
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -1
Query: 607 CVGCILALLISKASWYAFCESCTTECLVS 521
C GC+ + I ASW +C S + S
Sbjct: 367 CSGCVPPIAIDVASWLGYCNSMLNPIIYS 395
>Z49127-5|CAA88945.1| 421|Caenorhabditis elegans Hypothetical
protein F13D12.5 protein.
Length = 421
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 325 SVFCSIEEMTRHDDRRAPTTFL*ATERRFLSSLHE 221
S F S +E + H D+ + A +R F +S HE
Sbjct: 375 SSFVSADEASHHQDQETEASIFIAKQRSFPASFHE 409
>U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical protein
F20D12.2 protein.
Length = 1116
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/97 (19%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 312 EQKTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESKVFYLKMKGDY 491
E+K + E+++ +AKE +KVEKE+ E + ++D + + E K+ + ++ G +
Sbjct: 757 EKKLKRIEQEKNIAKELVLKVEKEISENA--LRMIIDDEIRRERRERERKMAH-EIVGKF 813
Query: 492 YRYLAEVATGETRHSVVQ--DSQKAYQDAFEISKAKM 596
+R + + + ++ + ++ + EI + ++
Sbjct: 814 WRVVLKSVDNHVKSICIEMVNEKETISEGLEIFRERV 850
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,760,269
Number of Sequences: 27780
Number of extensions: 335998
Number of successful extensions: 1092
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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