Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_F22
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 37 0.011
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 37 0.011
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 34 0.060
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 32 0.32
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 32 0.32
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 31 0.43
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 31 0.56
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 31 0.56
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 31 0.56
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 28 0.92
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 28 0.92
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr... 30 0.98
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li... 30 0.98
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 30 1.3
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 29 1.7
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 29 1.7
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 29 1.7
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 29 1.7
AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical ... 29 1.7
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 29 2.3
Z81104-7|CAB70253.2| 647|Caenorhabditis elegans Hypothetical pr... 29 3.0
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 3.0
Z92829-4|CAD54131.1| 569|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical pr... 28 4.0
U70870-1|AAB51198.1| 1404|Caenorhabditis elegans CELF35-1 protein. 28 4.0
U40934-5|AAA81683.2| 1404|Caenorhabditis elegans Hypothetical pr... 28 4.0
DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-lik... 28 4.0
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 28 5.2
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 28 5.2
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 28 5.2
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 28 5.2
AL132860-26|CAB60511.2| 700|Caenorhabditis elegans Hypothetical... 28 5.2
AL021492-1|CAA16377.1| 179|Caenorhabditis elegans Hypothetical ... 28 5.2
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 28 5.2
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 27 6.9
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 27 6.9
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 27 6.9
AC006833-12|AAF60942.1| 218|Caenorhabditis elegans Enhancer of ... 27 6.9
AC006833-11|AAU87801.1| 175|Caenorhabditis elegans Enhancer of ... 27 6.9
AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of ... 27 6.9
Z81533-8|CAB04332.1| 917|Caenorhabditis elegans Hypothetical pr... 27 9.1
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 27 9.1
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin receptor
protein 2 protein.
Length = 1338
Score = 36.7 bits (81), Expect = 0.011
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +2
Query: 44 FFGPVGVLLLVNLALFVSTTRQLTCGLWRRDEVKSTSERAALGRVCAKLVVVMGVTWGAD 223
F P+ V++ N+ +F+ ++ + RD K L + A L+ ++G+TW
Sbjct: 1044 FVAPIIVIIAANI-IFLLIALKVVLSVQSRDRTKWGRIIGWL-KGSATLLCLLGITWIFG 1101
Query: 224 VISWAAGGP--EYVWYATDLLNALQGVFIFLV 313
++ GG + W T +LN QG+FIF++
Sbjct: 1102 FLTAVKGGTGTAFAWIFT-ILNCTQGIFIFVL 1132
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 36.7 bits (81), Expect = 0.011
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +2
Query: 44 FFGPVGVLLLVNLALFVSTTRQLTCGLWRRDEVKSTSERAALGRVCAKLVVVMGVTWGAD 223
F P+ V++ N+ +F+ ++ + RD K L + A L+ ++G+TW
Sbjct: 1044 FVAPIIVIIAANI-IFLLIALKVVLSVQSRDRTKWGRIIGWL-KGSATLLCLLGITWIFG 1101
Query: 224 VISWAAGGP--EYVWYATDLLNALQGVFIFLV 313
++ GG + W T +LN QG+FIF++
Sbjct: 1102 FLTAVKGGTGTAFAWIFT-ILNCTQGIFIFVL 1132
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 34.3 bits (75), Expect = 0.060
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +2
Query: 467 APVSAPEPVPTPEAADADGPATGPTRLP 550
AP AP P P PEAA A PA P P
Sbjct: 484 APAPAPAPAPAPEAAPAPEPAPAPAPAP 511
Score = 32.3 bits (70), Expect = 0.24
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 467 APVSAPEPVPTPEAADADGPATGPTRLP 550
AP APE P PE A A PA P P
Sbjct: 490 APAPAPEAAPAPEPAPAPAPAPAPEAAP 517
Score = 31.1 bits (67), Expect = 0.56
Identities = 21/69 (30%), Positives = 26/69 (37%)
Frame = +2
Query: 332 AWAALKRCAGAWCARGNADERAGARVTHSSTHLPSCGESLTHTTQAPVSAPEPVPTPEAA 511
++ A KR A G A A A + P+ + P AP P P PEAA
Sbjct: 458 SYPAKKRRVARDYAEGEAAPAAPAEPAPAPAPAPAPAPEAAPAPE-PAPAPAPAPAPEAA 516
Query: 512 DADGPATGP 538
A P P
Sbjct: 517 PAAAPDAAP 525
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 467 APVSAPEPVPTPEAADADGPATGPTRLP 550
AP +AP P P P A A P P P
Sbjct: 494 APEAAPAPEPAPAPAPAPAPEAAPAAAP 521
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 467 APVSAPEPVPTPEAADADGPATGPTRLPME 556
AP P P P P A PA P P E
Sbjct: 498 APAPEPAPAPAPAPAPEAAPAAAPDAAPAE 527
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 467 APVSAP-EPVPTPEAADADGPA 529
AP +AP EP P PE A A PA
Sbjct: 520 APDAAPAEPAPVPEVAPAPAPA 541
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 31.9 bits (69), Expect = 0.32
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = -1
Query: 300 NTPCSAFSRSVAYHTYSGPPAAHEITSAPHVTPITTTS----LAQTRPSAALSDVDLTS 136
N P S S S ++H + P + + SAP P TT S +A + PS++ S+ +S
Sbjct: 1372 NRPSSLRSTSNSHHHHHHPASTSSVASAPATLPSTTPSNLSRMASSSPSSSASNSGTSS 1430
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 31.9 bits (69), Expect = 0.32
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = -1
Query: 300 NTPCSAFSRSVAYHTYSGPPAAHEITSAPHVTPITTTS----LAQTRPSAALSDVDLTS 136
N P S S S ++H + P + + SAP P TT S +A + PS++ S+ +S
Sbjct: 1372 NRPSSLRSTSNSHHHHHHPASTSSVASAPATLPSTTPSNLSRMASSSPSSSASNSGTSS 1430
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 31.5 bits (68), Expect = 0.43
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 467 APVSAPEPVPTPEAADADGPATGPT 541
AP P P P PEAA A P PT
Sbjct: 119 APAPEPTPAPAPEAAPAPAPDAAPT 143
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 467 APVSAPEPVPTPEAADADGPATGPTRLP 550
AP +AP P PTP A PA P P
Sbjct: 115 APEAAPAPEPTPAPAPEAAPAPAPDAAP 142
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 467 APVSAPEPVPTPEAADADGPATGPTRLP 550
AP APE P PE A P P P
Sbjct: 111 APAPAPEAAPAPEPTPAPAPEAAPAPAP 138
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +2
Query: 467 APVSAPEPVPTPEAADADGPATGP 538
APV APE P PEAA A P P
Sbjct: 190 APVPAPE--PAPEAAPAPAPEAAP 211
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 467 APVSAPEPVPTPEAADADGPATGPTRLPM 553
A + P PVP PE A PA P P+
Sbjct: 184 AAPAEPAPVPAPEPAPEAAPAPAPEAAPV 212
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 31.1 bits (67), Expect = 0.56
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Frame = +2
Query: 11 WFYGDMEILVYFFGPVGVLLLVNLALFVST---TRQLTCG--LWRRDEVKSTSERAALGR 175
W + +F GP + N + V T Q T G L R +V S +
Sbjct: 684 WLSTQNNFIWFFAGPACFIFCANSLVLVKTLCTVYQHTSGGYLPCRHDVDSGRSIRNWVK 743
Query: 176 VCAKLVVVMGVTWGADVISWAAGGPEYVW-YATDLLNALQGVFIFL 310
L ++GVTW + W V Y + N+LQG+FIFL
Sbjct: 744 GSLALASLLGVTWIFGLF-WVEDSRSIVMAYVFTISNSLQGLFIFL 788
>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical protein
B0457.1a protein.
Length = 1014
Score = 31.1 bits (67), Expect = 0.56
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Frame = +2
Query: 11 WFYGDMEILVYFFGPVGVLLLVNLALFVST---TRQLTCG--LWRRDEVKSTSERAALGR 175
W + +F GP + N + V T Q T G L R +V S +
Sbjct: 686 WLSTQNNFIWFFAGPACFIFCANSLVLVKTLCTVYQHTSGGYLPCRHDVDSGRSIRNWVK 745
Query: 176 VCAKLVVVMGVTWGADVISWAAGGPEYVW-YATDLLNALQGVFIFL 310
L ++GVTW + W V Y + N+LQG+FIFL
Sbjct: 746 GSLALASLLGVTWIFGLF-WVEDSRSIVMAYVFTISNSLQGLFIFL 790
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 31.1 bits (67), Expect = 0.56
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Frame = +2
Query: 11 WFYGDMEILVYFFGPVGVLLLVNLALFVST---TRQLTCG--LWRRDEVKSTSERAALGR 175
W + +F GP + N + V T Q T G L R +V S +
Sbjct: 684 WLSTQNNFIWFFAGPACFIFCANSLVLVKTLCTVYQHTSGGYLPCRHDVDSGRSIRNWVK 743
Query: 176 VCAKLVVVMGVTWGADVISWAAGGPEYVW-YATDLLNALQGVFIFL 310
L ++GVTW + W V Y + N+LQG+FIFL
Sbjct: 744 GSLALASLLGVTWIFGLF-WVEDSRSIVMAYVFTISNSLQGLFIFL 788
>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
protein LAT-1A protein.
Length = 1014
Score = 31.1 bits (67), Expect = 0.56
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Frame = +2
Query: 11 WFYGDMEILVYFFGPVGVLLLVNLALFVST---TRQLTCG--LWRRDEVKSTSERAALGR 175
W + +F GP + N + V T Q T G L R +V S +
Sbjct: 686 WLSTQNNFIWFFAGPACFIFCANSLVLVKTLCTVYQHTSGGYLPCRHDVDSGRSIRNWVK 745
Query: 176 VCAKLVVVMGVTWGADVISWAAGGPEYVW-YATDLLNALQGVFIFL 310
L ++GVTW + W V Y + N+LQG+FIFL
Sbjct: 746 GSLALASLLGVTWIFGLF-WVEDSRSIVMAYVFTISNSLQGLFIFL 790
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 27.9 bits (59), Expect(2) = 0.92
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 473 VSAPEPVPTPEAADADGPATGP 538
V PEP PTP A A+ P P
Sbjct: 346 VEEPEPAPTPAPAPAEDPVVTP 367
Score = 21.0 bits (42), Expect(2) = 0.92
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2
Query: 458 TTQAPVSAPEPV 493
TT AP+ AP PV
Sbjct: 298 TTPAPLEAPAPV 309
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 27.9 bits (59), Expect(2) = 0.92
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 473 VSAPEPVPTPEAADADGPATGP 538
V PEP PTP A A+ P P
Sbjct: 346 VEEPEPAPTPAPAPAEDPVVTP 367
Score = 21.0 bits (42), Expect(2) = 0.92
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2
Query: 458 TTQAPVSAPEPV 493
TT AP+ AP PV
Sbjct: 298 TTPAPLEAPAPV 309
>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical protein
F31D5.5 protein.
Length = 1788
Score = 30.3 bits (65), Expect = 0.98
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 194 VVMGVTWGADVISWAAGGPEYVWYATDLLNALQGVFIFLV 313
V MG+ WG + I GP Y LL QG+ +FL+
Sbjct: 1714 VAMGLPWGIEFILIGVAGPSPWNYIFVLLLGTQGIDLFLI 1753
>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
protein MTH-1 protein.
Length = 1757
Score = 30.3 bits (65), Expect = 0.98
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 194 VVMGVTWGADVISWAAGGPEYVWYATDLLNALQGVFIFLV 313
V MG+ WG + I GP Y LL QG+ +FL+
Sbjct: 1683 VAMGLPWGIEFILIGVAGPSPWNYIFVLLLGTQGIDLFLI 1722
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 29.9 bits (64), Expect = 1.3
Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = -1
Query: 318 PTTRKMNTPCSAFSRSVAYHTYSGPPAAHEITSAPHVTPITTTSLAQT-RPSAALSDVDL 142
PTT +T + +++ A P E+T+ T TT+S T +P+ L D +
Sbjct: 255 PTTTAESTTKKSTTKAPATTEEPTPTTTEEVTTTEAETSTTTSSETSTEKPTTPLIDNKI 314
Query: 141 TSSRRQRPQVS-WRVVDTNSAKLTSNSTPTGPKK*TRISMS 22
+P+ + + V T T+ TP K ++++S
Sbjct: 315 AGPATGKPETTHFPVTGTTPNFDTATETPFVAKSEDKMTLS 355
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Frame = -1
Query: 237 AHEITSAPHVTPITTTSLAQTRPSAALS----DVDLTS-----SRRQRPQVSWRVVDTNS 85
+H T P TP+ T S +Q+ PSA L+ ++ TS S QRP S
Sbjct: 906 SHTTTVEPS-TPLETASTSQSTPSATLTSTTENIPSTSKIPETSTTQRPTSPILTSGATS 964
Query: 84 AKLTSNSTPTGPKK*TRISMSP*NQP 7
++ ST T P T ++ P P
Sbjct: 965 TSSSTESTTTSPTTSTTTTLPPTTTP 990
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +2
Query: 356 AGAWCARGNADERAGARVTHSSTHLPSCGESLTHTTQAPVSAPEPVPTPEAA 511
AG W NA + + S+ P E + A AP PVPTP AA
Sbjct: 372 AGEWLNGTNAVPQKVSMAPSQSSSSPPPPEPVPTPKVAQTPAPVPVPTPAAA 423
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 482 PEPVPTPEAADADGPATGPT 541
PEPVPTP+ A P PT
Sbjct: 400 PEPVPTPKVAQTPAPVPVPT 419
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +2
Query: 356 AGAWCARGNADERAGARVTHSSTHLPSCGESLTHTTQAPVSAPEPVPTPEAA 511
AG W NA + + S+ P E + A AP PVPTP AA
Sbjct: 372 AGEWLNGTNAVPQKVSMAPSQSSSSPPPPEPVPTPKVAQTPAPVPVPTPAAA 423
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 482 PEPVPTPEAADADGPATGPT 541
PEPVPTP+ A P PT
Sbjct: 400 PEPVPTPKVAQTPAPVPVPT 419
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +2
Query: 356 AGAWCARGNADERAGARVTHSSTHLPSCGESLTHTTQAPVSAPEPVPTPEAA 511
AG W NA + + S+ P E + A AP PVPTP AA
Sbjct: 372 AGEWLNGTNAVPQKVSMAPSQSSSSPPPPEPVPTPKVAQTPAPVPVPTPAAA 423
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 482 PEPVPTPEAADADGPATGPT 541
PEPVPTP+ A P PT
Sbjct: 400 PEPVPTPKVAQTPAPVPVPT 419
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 434 SCGESLTHTTQAPVSAPEPVPTPEAADADGPATG 535
+ G + A +APEP P P AA PA G
Sbjct: 364 AAGAAAPPPAPAAAAAPEPAPAPAAAPPPAPAAG 397
>AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical
protein Y49F6B.9 protein.
Length = 382
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 479 APEPVPTPEAADADGPATGPT 541
AP P P PE +ADG A GP+
Sbjct: 342 APPPEPEPEHRNADGSAPGPS 362
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 467 APVSAPEPVPTPEAADADGPATGPTRLP 550
AP AP P P PEAA A A P P
Sbjct: 184 APEPAPAPAPAPEAALAPETAPAPAPAP 211
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/51 (39%), Positives = 21/51 (41%)
Frame = +2
Query: 377 GNADERAGARVTHSSTHLPSCGESLTHTTQAPVSAPEPVPTPEAADADGPA 529
G A GA V P+ AP APE VP P AADA G A
Sbjct: 25 GEAGYSGGAGVEAPPPPPPADAAPAPAPEPAPAPAPEAVPAP-AADAGGYA 74
Score = 27.5 bits (58), Expect = 6.9
Identities = 22/75 (29%), Positives = 24/75 (32%)
Frame = +2
Query: 326 PHAWAALKRCAGAWCARGNADERAGARVTHSSTHLPSCGESLTHTTQAPVSAPEPVPTPE 505
P A A AG + A A G+ T E T P P P PE
Sbjct: 60 PEAVPAPAADAGGYAAAA-APAGGGSYPTKKRRVARDYAEGGAAPTAPAEPVPAPAPEPE 118
Query: 506 AADADGPATGPTRLP 550
AA A P P P
Sbjct: 119 AAPAPAPVAEPALAP 133
>Z81104-7|CAB70253.2| 647|Caenorhabditis elegans Hypothetical
protein M199.3 protein.
Length = 647
Score = 28.7 bits (61), Expect = 3.0
Identities = 22/81 (27%), Positives = 29/81 (35%), Gaps = 1/81 (1%)
Frame = +2
Query: 248 PEYVWYATDLLNALQGVFIFLVVGCQPHAWAALKRCAGAWCARGNADERAGARVTHS-ST 424
P + Y N L GVF+ + C W R +G +C R AG S T
Sbjct: 453 PTDITYTVRYENGLWGVFVESKIACPDDYWTYSPRESGDYCFRAGI---AGYNEQISYET 509
Query: 425 HLPSCGESLTHTTQAPVSAPE 487
+ C T PV+ E
Sbjct: 510 AVERCKSEYNATFSGPVNEEE 530
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +2
Query: 389 ERAGARVTHSSTHLPSCGESLTHTTQAPVSAPEPVPTPEAADADGPATGPT 541
E+ T++ +P+ E + T P APEP PE A P T
Sbjct: 221 EQVAPVATYTQGPVPTPVEQVVETVVEPQQAPEPEQAPEPQQAPEPTVVET 271
>Z92829-4|CAD54131.1| 569|Caenorhabditis elegans Hypothetical
protein F10A3.4 protein.
Length = 569
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -1
Query: 225 TSAPHVTPITTTSLAQTRPSAALSDVDLTSSRRQRPQVSWRVVDTNSAKLTSNSTPTG 52
T+ TP+ TT++ TRP+ T ++ Q VV T + + N T TG
Sbjct: 477 TTTTTQTPLPTTTILTTRPALTTQSTVFT-TQAVTTQQQTTVVKTPTTQTPQNQTTTG 533
>Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 130 PPEAAGQLARSGHEQRQVDEQQHADGPEEVDKNLHVPVKPA 8
PP+A+G +A H Q + G EV H V+P+
Sbjct: 311 PPQASGAVAGGAHSAGQYHAESKLGGGREVWFGFHQSVRPS 351
>Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 130 PPEAAGQLARSGHEQRQVDEQQHADGPEEVDKNLHVPVKPA 8
PP+A+G +A H Q + G EV H V+P+
Sbjct: 311 PPQASGAVAGGAHSAGQYHAESKLGGGREVWFGFHQSVRPS 351
>U70870-1|AAB51198.1| 1404|Caenorhabditis elegans CELF35-1 protein.
Length = 1404
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 401 ARVTHSSTHLPSCGESLTHTTQAPVSAPEPVPTPEAADADGP 526
A T SS++ S G S T +++ PV+A P+P + + P
Sbjct: 1301 ASSTSSSSNRSSSGSSYTSSSKRPVNAVGPLPLNKNVEDQSP 1342
>U40934-5|AAA81683.2| 1404|Caenorhabditis elegans Hypothetical protein
F35H10.10 protein.
Length = 1404
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 401 ARVTHSSTHLPSCGESLTHTTQAPVSAPEPVPTPEAADADGP 526
A T SS++ S G S T +++ PV+A P+P + + P
Sbjct: 1301 ASSTSSSSNRSSSGSSYTSSSKRPVNAVGPLPLNKNVEDQSP 1342
>DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-like
protein.
Length = 1010
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 130 PPEAAGQLARSGHEQRQVDEQQHADGPEEVDKNLHVPVKPA 8
PP+A+G +A H Q + G EV H V+P+
Sbjct: 319 PPQASGAVAGGAHSAGQYHAESKLGGGREVWFGFHQSVRPS 359
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +3
Query: 39 STSSGPSACCCSSTWRCSCPLRAS*PAASGGATRSSRHQRGRRWGESAPS 188
STSSGPS S+ S P S P+ + G + +S + G S S
Sbjct: 558 STSSGPSTASRSTVSTTSGPSTTSGPSTTSGPSTTSGSTKSTTSGPSTTS 607
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 27.9 bits (59), Expect = 5.2
Identities = 25/101 (24%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Frame = -1
Query: 315 TTRKMNTPCSAFSRSVAYHTYSGPPAAHEITSAPHVTPITTTSLAQTRPSAALSDVDLTS 136
TT TP +R+ + P T+ TP+ TT LA TR S TS
Sbjct: 284 TTAAPTTPRLTTARATTPLATTSRPTTPSPTTPRATTPLATTPLATTRAPLPPSPPPRTS 343
Query: 135 SR--RQRPQVSWRVVDTNSAKLTSNSTPTGPKK*TRISMSP 19
R Q P T TP ++ + +P
Sbjct: 344 KRPVTQAPTTPRATTTRRPTTTTPRPTPRRTRRPKTTTAAP 384
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 27.9 bits (59), Expect = 5.2
Identities = 24/85 (28%), Positives = 38/85 (44%)
Frame = -1
Query: 315 TTRKMNTPCSAFSRSVAYHTYSGPPAAHEITSAPHVTPITTTSLAQTRPSAALSDVDLTS 136
T+R +TP S + S T + A T+ TP TTT + + ++ ++ +TS
Sbjct: 215 TSRSTSTPSSTEASS----TVTSTTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTS 270
Query: 135 SRRQRPQVSWRVVDTNSAKLTSNST 61
+ V V T +A TS ST
Sbjct: 271 TTVPTTTVV-TTVPTTTATSTSTST 294
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 27.9 bits (59), Expect = 5.2
Identities = 24/85 (28%), Positives = 38/85 (44%)
Frame = -1
Query: 315 TTRKMNTPCSAFSRSVAYHTYSGPPAAHEITSAPHVTPITTTSLAQTRPSAALSDVDLTS 136
T+R +TP S + S T + A T+ TP TTT + + ++ ++ +TS
Sbjct: 197 TSRSTSTPSSTEASS----TVTSTTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTS 252
Query: 135 SRRQRPQVSWRVVDTNSAKLTSNST 61
+ V V T +A TS ST
Sbjct: 253 TTVPTTTVV-TTVPTTTATSTSTST 276
>AL132860-26|CAB60511.2| 700|Caenorhabditis elegans Hypothetical
protein Y56A3A.32 protein.
Length = 700
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 443 ESLTHTTQAPVSAPEPVPTPEAADA 517
E H +AP +A EP P+ ADA
Sbjct: 184 EEAVHARRAPAAAEEPAPSTSKADA 208
>AL021492-1|CAA16377.1| 179|Caenorhabditis elegans Hypothetical
protein Y45F10D.2 protein.
Length = 179
Score = 27.9 bits (59), Expect = 5.2
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = -1
Query: 252 SGPPAAHEITSAPHVTPITTTSLAQTRPSAALSDVDLTSSRRQRPQVSWRVVDTNSAKLT 73
S PPA+ +SA +TP + A T P S + RQ+ Q T S T
Sbjct: 79 STPPASSASSSASSMTPTGNGAQASTIPMNQGSSTSMPV--RQKRQAVSTTTTTASPMST 136
Query: 72 SNSTPT 55
S+ TP+
Sbjct: 137 SSPTPS 142
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 27.9 bits (59), Expect = 5.2
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
Frame = -1
Query: 261 HTYSGPPAAHEITSAPHVTPITTTSLAQTRPSAALSDVDLTSSRRQRPQVSWRVVDTNSA 82
H + PPAA T P TP TTT+ T + AL T + + T +
Sbjct: 272 HYETVPPAAQT-TPQPPCTPRTTTTTTTTTTTTALPPCVYTPAPPATAPPATATPATQTP 330
Query: 81 KLTSNSTP---TGPKK*TRISMSP 19
+ S +TP T P++ T + P
Sbjct: 331 RTYSTTTPIKTTVPQQWTTLPPGP 354
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/92 (22%), Positives = 32/92 (34%), Gaps = 4/92 (4%)
Frame = -1
Query: 318 PTTRKMNTPCSAFSRSVAYHTYSGPPAAHEITSAPHV----TPITTTSLAQTRPSAALSD 151
PTT T + + T + P E T+ P TP TTT T +
Sbjct: 78 PTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTT 137
Query: 150 VDLTSSRRQRPQVSWRVVDTNSAKLTSNSTPT 55
T+ + + T + T+ +TPT
Sbjct: 138 ETTTTPTTTTTETTTTPTTTTTTPTTTTTTPT 169
Score = 27.1 bits (57), Expect = 9.1
Identities = 23/97 (23%), Positives = 35/97 (36%), Gaps = 3/97 (3%)
Frame = -1
Query: 315 TTRKMNTPCSAFSRSVAYHTYSGPPAAHEITSAPHVT---PITTTSLAQTRPSAALSDVD 145
TT T + +V T + P T+ P T P TTT+ A T +
Sbjct: 201 TTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPT 260
Query: 144 LTSSRRQRPQVSWRVVDTNSAKLTSNSTPTGPKK*TR 34
T+ +P + T T+ +T T K T+
Sbjct: 261 TTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTK 297
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 461 TQAPVSAPEPVPTPEAADADGPATGPT 541
T AP A E P P + + PA PT
Sbjct: 264 TPAPAPAAEETPAPATSSEEAPAPAPT 290
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +2
Query: 431 PSCGESLTHTTQAPVSAPEPVPTPEAADADGPATGPTRLP 550
P+ G + Q APEP P E A PA T P
Sbjct: 193 PASGYVTSEQEQGAGDAPEPAPVVEETPAPTPAAEETPAP 232
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 461 TQAPVSAPEPVPTPEAADADGPATGP 538
T AP A E P P A + PAT P
Sbjct: 572 TPAPAPAAEETPAPAPAAEETPATAP 597
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 449 LTHTTQAPVSAPEPVPTPEAADADGPATG 535
L +Q P+SAP P+P D + TG
Sbjct: 782 LFFASQQPISAPPPIPQNNGGDVNTGGTG 810
>AC006833-12|AAF60942.1| 218|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform b protein.
Length = 218
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 410 THSSTHLPSCGESLTHTTQAPVSAPEPVPTPEAADADGP 526
T S LP C S+ + + + TPE + DGP
Sbjct: 123 TVSQAPLPQCSRSVKSAKELSPTPSTEIETPEEEELDGP 161
>AC006833-11|AAU87801.1| 175|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform c protein.
Length = 175
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 410 THSSTHLPSCGESLTHTTQAPVSAPEPVPTPEAADADGP 526
T S LP C S+ + + + TPE + DGP
Sbjct: 80 TVSQAPLPQCSRSVKSAKELSPTPSTEIETPEEEELDGP 118
>AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform a protein.
Length = 262
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 410 THSSTHLPSCGESLTHTTQAPVSAPEPVPTPEAADADGP 526
T S LP C S+ + + + TPE + DGP
Sbjct: 167 TVSQAPLPQCSRSVKSAKELSPTPSTEIETPEEEELDGP 205
>Z81533-8|CAB04332.1| 917|Caenorhabditis elegans Hypothetical
protein F36G9.13 protein.
Length = 917
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 443 ESLTHTTQAPVSAPEPVPTPEAADADGPATGPTRLP 550
+S H+ + P P P P P A A P T P +P
Sbjct: 838 QSAQHSVKVP--PPPPPPVPTAPPAKTPETAPLLVP 871
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -1
Query: 228 ITSAPHVTPITTTSLAQTRPSAALSDVDLTSSRRQRPQVSWRVVDTNSAKLTSNSTPTGP 49
I+ P +PI +T+ A + + +SDV S+ P S S+ + +ST G
Sbjct: 1347 ISPVPTSSPIPSTTFASSTSGSTISDVSSVSTTSLAPLSSSLPSTVPSSTQSFSSTSEGS 1406
Query: 48 KK 43
K
Sbjct: 1407 SK 1408
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +2
Query: 431 PSCGESLTHTTQ--APVSAPEPVPTPEAADADGPATGPT 541
P +S+T PV+AP PVPTP P PT
Sbjct: 1097 PMTAQSVTPMASHIVPVAAPVPVPTPFTIPPPVPPPPPT 1135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.138 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,764,027
Number of Sequences: 27780
Number of extensions: 175411
Number of successful extensions: 1411
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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