Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_F20
(413 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 206 7e-54
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 205 1e-53
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 204 2e-53
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 204 2e-53
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 204 2e-53
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 204 2e-53
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 204 3e-53
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 203 4e-53
12_02_1282 + 27528159-27529148,27529549-27529614 202 7e-53
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 202 7e-53
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 91 3e-19
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 71 3e-13
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 64 6e-11
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 56 1e-08
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 53 8e-08
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 42 1e-04
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 42 3e-04
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 36 0.010
07_03_0401 + 17724103-17724463,17724554-17724683,17725068-177250... 33 0.090
11_06_0102 + 20112731-20112928,20113314-20113514,20113606-201136... 30 0.84
07_03_0143 - 14315097-14315130,14315594-14315662,14316152-143162... 30 0.84
07_03_1700 - 28810239-28810870,28811304-28812594 29 1.5
12_01_0843 + 7891622-7892524 27 4.5
02_05_0477 - 29339649-29340253,29340880-29341492 27 4.5
04_04_0692 - 27307349-27307728,27308381-27308546 27 7.8
02_02_0088 - 6655493-6655601,6656057-6656259,6656382-6656594,665... 27 7.8
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 206 bits (502), Expect = 7e-54
Identities = 90/104 (86%), Positives = 97/104 (93%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRDSYVGDEAQ 280
M +E++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+D+YVGDEAQ
Sbjct: 1 MAEEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 281 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 412
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 61 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPV 104
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 205 bits (500), Expect = 1e-53
Identities = 89/104 (85%), Positives = 97/104 (93%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRDSYVGDEAQ 280
M DE++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+D+YVGDEAQ
Sbjct: 1 MADEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 281 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 412
+KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPE+HPV
Sbjct: 61 AKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEDHPV 104
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 204 bits (498), Expect = 2e-53
Identities = 90/101 (89%), Positives = 96/101 (95%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRDSYVGDEAQSKR 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+D+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 412
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV 105
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 204 bits (498), Expect = 2e-53
Identities = 90/101 (89%), Positives = 96/101 (95%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRDSYVGDEAQSKR 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+D+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 412
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV 105
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 204 bits (498), Expect = 2e-53
Identities = 90/101 (89%), Positives = 96/101 (95%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRDSYVGDEAQSKR 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+D+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 412
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV 105
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 204 bits (498), Expect = 2e-53
Identities = 90/101 (89%), Positives = 96/101 (95%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRDSYVGDEAQSKR 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+D+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 412
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV 105
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 204 bits (497), Expect = 3e-53
Identities = 89/101 (88%), Positives = 96/101 (95%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRDSYVGDEAQSKR 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+D+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 412
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPI 105
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 203 bits (496), Expect = 4e-53
Identities = 89/101 (88%), Positives = 95/101 (94%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRDSYVGDEAQSKR 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+D+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 412
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPI 105
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 202 bits (494), Expect = 7e-53
Identities = 89/101 (88%), Positives = 95/101 (94%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRDSYVGDEAQSKR 289
+++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+D+YVGDEAQSKR
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 412
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPV 105
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 202 bits (494), Expect = 7e-53
Identities = 89/100 (89%), Positives = 95/100 (95%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRDSYVGDEAQSKR 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+D+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 409
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 91.1 bits (216), Expect = 3e-19
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Frame = +2
Query: 125 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQRDSYVGDEAQSKRGIL 298
+V DNG+G K GFAG++ P +VFP +VGRP R++ + D VG R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACADLRHQL 66
Query: 299 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 403
+ YP+ +GIV +WDDM IW H FY+EL+V P E
Sbjct: 67 DVSYPVTNGIVQSWDDMGHIWDHAFYSELKVDPSE 101
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 71.3 bits (167), Expect = 3e-13
Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 18/113 (15%)
Frame = +2
Query: 122 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH---QGVMVG------------MGQRD 256
A+V+DNG+G K GF+G+ P P++V Q M M D
Sbjct: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADLD 67
Query: 257 SYVGDEAQS---KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 406
++GDEA S G+ T K+PI HG V +WD ME+ W +N LR PEEH
Sbjct: 68 FFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEH 120
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 63.7 bits (148), Expect = 6e-11
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 19/114 (16%)
Frame = +2
Query: 122 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV-------GRPRH---QGVMVG------MGQR 253
A+V+DNG+G K GFAG+ P + P++V G+ R +G + M
Sbjct: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL 67
Query: 254 DSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 406
D ++G++A ++ L YPI +G V NWD ME+ W +N LR PE+H
Sbjct: 68 DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDH 121
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 55.6 bits (128), Expect = 1e-08
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +2
Query: 248 QRDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 412
+R YVG E + +R + + P++ G VT+WD ++ IW+H F L + PEEHP+
Sbjct: 116 KRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPM 170
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI 205
+EV+A+V+D GS CKAG+AGDD P+AVFPS+
Sbjct: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSL 36
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 53.2 bits (122), Expect = 8e-08
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = +2
Query: 125 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRDSYVGDEAQSKR---GI 295
+V+DNG G+ KAGF GD P AV P+ + +P G + V D+ Q++
Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKP--------PGSKKWLVADQLQAQDVDVTG 59
Query: 296 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 397
+TL+ PI+ G + N + ++W N L+V P
Sbjct: 60 MTLRRPIDRGYLINQEVQREVWERVIRNLLQVDP 93
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 42.3 bits (95), Expect = 1e-04
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = +2
Query: 125 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG---VMVGMGQRDSYVGDEAQSKRGI 295
+V+DNG+ + G+AG+ PR F +IV RPRH+ + +G D + R
Sbjct: 22 IVIDNGASTFRIGWAGEAEPRVAFRNIVQRPRHRSSGETVTVVGDTDPALMKYFDCTRS- 80
Query: 296 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 412
++ P + +V ++ ME I F + HP+
Sbjct: 81 -AIRSPFDDDVVYQFEYMEYILDFGFDRLGATSEVGHPI 118
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 41.5 bits (93), Expect = 3e-04
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 311 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 412
P++ G +WD ++ IW+H F L + PEEHP+
Sbjct: 92 PMKDGTFIDWDIVDNIWNHAFRQRLLINPEEHPM 125
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 36.3 bits (80), Expect = 0.010
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +2
Query: 122 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQRDSYVGDEAQSKRGIL 298
A+VVD GS + KAG A D +P V PS + + D +GD A + +
Sbjct: 3 AVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAVVEEVV- 51
Query: 299 TLKYPIEHGIVTNWDDMEKIWHHTFYNEL 385
P+ G V +WD ME + ++ Y+ +
Sbjct: 52 ---QPVVRGFVKDWDAMEDLLNYVLYSNI 77
>07_03_0401 +
17724103-17724463,17724554-17724683,17725068-17725083,
17725130-17725203,17725693-17725761,17726224-17726257
Length = 227
Score = 33.1 bits (72), Expect = 0.090
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 281 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 412
++R + + P++ G +WD ++ IW+H F PEEHP+
Sbjct: 163 NRRDHMEVISPMKDGTFIDWDIVDNIWNHAF----SFYPEEHPM 202
>11_06_0102 +
20112731-20112928,20113314-20113514,20113606-20113695,
20114269-20114457,20115375-20115387,20115824-20115990,
20117334-20117522,20118940-20119053,20120912-20121010,
20122368-20122490,20122579-20122701,20123179-20123277,
20124786-20124842,20125136-20125182,20125296-20125439,
20125540-20125717,20126318-20126398,20126480-20126563,
20126624-20126629
Length = 733
Score = 29.9 bits (64), Expect = 0.84
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = -2
Query: 370 GVMPDLLHIVPVGDDAVFDGVFECEDTPLALCLITYVGVPLTHADHDALVTRS 212
G++ DL+++ VGDDA++DG C+ A + + L + ++ + V R+
Sbjct: 405 GLIRDLIYVGAVGDDAIYDG---CQSWETAFIIQAFCATDLVN-EYGSTVRRA 453
>07_03_0143 -
14315097-14315130,14315594-14315662,14316152-14316225,
14316316-14316331,14316716-14316845,14316936-14316999
Length = 128
Score = 29.9 bits (64), Expect = 0.84
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 281 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 412
++R + + P++ G +WD ++ IW+H F EEHP+
Sbjct: 64 NRRDHMEVISPMKDGTFIDWDIVDNIWNHAF----SFYAEEHPM 103
>07_03_1700 - 28810239-28810870,28811304-28812594
Length = 640
Score = 29.1 bits (62), Expect = 1.5
Identities = 21/73 (28%), Positives = 31/73 (42%)
Frame = -2
Query: 376 VEGVMPDLLHIVPVGDDAVFDGVFECEDTPLALCLITYVGVPLTHADHDALVTRSPHDRG 197
++G +P L P G G+ C PLA CL+ P + A S H
Sbjct: 201 LKGQIPQSLQTFPNGSFLGNPGL--C-GPPLAKCLLPDSPTPSPASPSSAPTPMSAHHEK 257
Query: 196 KYGAGSVVSRETG 158
K+GAG +++ G
Sbjct: 258 KFGAGFIIAVAVG 270
>12_01_0843 + 7891622-7892524
Length = 300
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAV 193
E+V ++ D GSG +AG GD AP V
Sbjct: 170 EDVTSVWRDGGSGAARAGDDGDGAPAFV 197
>02_05_0477 - 29339649-29340253,29340880-29341492
Length = 405
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 208
+ VAALV N G+ + G+DA A PS++
Sbjct: 44 DAVAALVASNEDGVVEGEGEGEDAAEAPAPSVL 76
>04_04_0692 - 27307349-27307728,27308381-27308546
Length = 181
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 207 TIEGNTARGASSPAKPALHIPDPLSTTNAATSSS 106
T+ G+ A G + AKP+ DP +TT TSS+
Sbjct: 123 TLSGSAA-GGTRLAKPSSSDADPTTTTTTRTSSA 155
>02_02_0088 -
6655493-6655601,6656057-6656259,6656382-6656594,
6656683-6656792,6656878-6656981,6657076-6657245,
6657337-6657501,6657584-6657702,6657853-6657940,
6658035-6658140,6658235-6658323,6658461-6658604,
6658715-6658807,6658906-6658972,6659116-6659228,
6659306-6659401,6659524-6659724
Length = 729
Score = 26.6 bits (56), Expect = 7.8
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +3
Query: 60 YLFNRTI*LKTNSQCATRKLPRWS*TMGPECAKPVSRETTLPAPYFPRSWGDLVTRASWS 239
Y N + ++ N Q LP WS ++ P+C V T+ P +V R +W
Sbjct: 390 YHMNTAVKVRFNGQ--QYNLPAWSISILPDCKTAVFNTATVKEPTLMPKMNPVV-RFAWQ 446
Query: 240 AWVRGT 257
++ T
Sbjct: 447 SYSEDT 452
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,334,881
Number of Sequences: 37544
Number of extensions: 282725
Number of successful extensions: 887
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 742607976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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