Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_F19
         (532 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   1.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   1.5  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   3.4  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    22   3.4  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   3.4  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    22   4.5  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    22   4.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   5.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   7.9  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 113 FHMGKVLYITQKSTGQIRNQYVW 181
           FH+ ++LY+ + ST    NQ+V+
Sbjct: 276 FHVQRLLYVYEDSTYDDINQWVY 298


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 91  EEGFSVKVSYGKSLIHNSKINGTNPKP 171
           EE  ++++  G+  +HN   NG+   P
Sbjct: 300 EERLTLRIHRGRGSVHNGSNNGSPRSP 326


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 241 DGLRGCLELEPKLLGEGQLDFPIGCFKSTPG 333
           DG +  L+ + +LLGE +   P+G F  T G
Sbjct: 162 DGYQNILDKKDELLGEWEKRAPMG-FYGTRG 191


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 241 DGLRGCLELEPKLLGEGQLDFPIGCFKSTPG 333
           DG +  L+ + +LLGE +   P+G F  T G
Sbjct: 162 DGYQNILDKKDELLGEWEKRAPMG-FYGTRG 191


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 241 DGLRGCLELEPKLLGEGQLDFPIGCFKSTPG 333
           DG +  L+ + +LLGE +   P+G F  T G
Sbjct: 162 DGYQNILDKKDELLGEWEKRAPMG-FYGTRG 191


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 109 LLKILPPAINTSCER 65
           L KILP A++T C +
Sbjct: 60  LKKILPDALSTGCNK 74


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 109 LLKILPPAINTSCER 65
           L KILP A++T C +
Sbjct: 60  LKKILPDALSTGCNK 74


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +2

Query: 323 QHLEEWKW 346
           QHL++W W
Sbjct: 622 QHLDQWNW 629


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 268 EPKLLGEGQLDFPIGCFKS 324
           E +++GE   DF +  FK+
Sbjct: 416 EKRIMGEADCDFVVKLFKT 434


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,085
Number of Sequences: 438
Number of extensions: 2608
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)