Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_F16
         (580 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        31   0.036
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        31   0.036
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        31   0.036
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        31   0.036
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    31   0.036
AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1 ...    27   0.33 
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    27   0.58 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   5.4  

>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 30.7 bits (66), Expect = 0.036
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -3

Query: 269 SWSRSVSGTATDP-GCGCASTNASATSNGTCVCGRICFC 156
           SWS       TD  GC   S +A  + +G C CGR C C
Sbjct: 12  SWSGDNCECTTDTTGCKAPSNDAVCSGHGQCNCGR-CSC 49


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 30.7 bits (66), Expect = 0.036
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -3

Query: 269 SWSRSVSGTATDP-GCGCASTNASATSNGTCVCGRICFC 156
           SWS       TD  GC   S +A  + +G C CGR C C
Sbjct: 12  SWSGDNCECTTDTTGCKAPSNDAVCSGHGQCNCGR-CSC 49


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 30.7 bits (66), Expect = 0.036
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -3

Query: 269 SWSRSVSGTATDP-GCGCASTNASATSNGTCVCGRICFC 156
           SWS       TD  GC   S +A  + +G C CGR C C
Sbjct: 12  SWSGDNCECTTDTTGCKAPSNDAVCSGHGQCNCGR-CSC 49


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 30.7 bits (66), Expect = 0.036
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -3

Query: 269 SWSRSVSGTATDP-GCGCASTNASATSNGTCVCGRICFC 156
           SWS       TD  GC   S +A  + +G C CGR C C
Sbjct: 12  SWSGDNCECTTDTTGCKAPSNDAVCSGHGQCNCGR-CSC 49


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 30.7 bits (66), Expect = 0.036
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -3

Query: 269 SWSRSVSGTATDP-GCGCASTNASATSNGTCVCGRICFC 156
           SWS       TD  GC   S +A  + +G C CGR C C
Sbjct: 588 SWSGDNCECTTDTTGCKAPSNDAVCSGHGQCNCGR-CSC 625


>AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1
           protein.
          Length = 45

 Score = 27.5 bits (58), Expect = 0.33
 Identities = 15/42 (35%), Positives = 17/42 (40%)
 Frame = -3

Query: 305 GSGCDCENGRASSWSRSVSGTATDPGCGCASTNASATSNGTC 180
           G+ C C +G  S         ATD  C CAS      S G C
Sbjct: 7   GNDCKCTSGCGSG-----QPCATDCKCACASGGCKEKSGGCC 43


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 26.6 bits (56), Expect = 0.58
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
 Frame = -3

Query: 296 CDCENG-RASSWSRSVSGTATDPGC--GCASTNAS--ATSNGTCVCGRICFC 156
           C+C+          S   +  +PG    C  +NAS   +  G CVCG +C C
Sbjct: 523 CECDGTYHGQRCECSAMESLLEPGMVDACRMSNASEECSGRGQCVCG-VCVC 573


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -3

Query: 116 GAPYRLTSAHQVSPGLLQHLGGQRILQKQ 30
           G+  RL   HQ  P L  H GG  I + Q
Sbjct: 565 GSTTRLPPLHQPFPMLANHAGGGAIPEGQ 593


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,677
Number of Sequences: 2352
Number of extensions: 8986
Number of successful extensions: 23
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)