Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_F16
(580 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. 41 0.004
X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. 41 0.004
M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein. 41 0.004
BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, argini... 41 0.004
BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, argini... 41 0.004
BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. 41 0.004
BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. 41 0.004
AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, argini... 41 0.004
AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 41 0.004
AB126070-1|BAD20197.1| 278|Homo sapiens keratin associated prot... 31 3.9
X07979-1|CAA30790.1| 798|Homo sapiens protein ( Human mRNA for ... 30 5.1
M94077-1|AAA36181.1| 316|Homo sapiens loricrin protein. 30 5.1
M61120-1|AAA36180.1| 316|Homo sapiens loricrin protein. 30 5.1
CR536555-1|CAG38792.1| 316|Homo sapiens LOR protein. 30 5.1
BX537407-1|CAD97649.1| 823|Homo sapiens hypothetical protein pr... 30 5.1
BC108290-1|AAI08291.1| 316|Homo sapiens LOR protein protein. 30 5.1
BC034690-1|AAH34690.1| 316|Homo sapiens LOR protein protein. 30 5.1
BC020057-1|AAH20057.1| 798|Homo sapiens integrin, beta 1 (fibro... 30 5.1
AL365203-2|CAI14426.1| 798|Homo sapiens integrin, beta 1 (fibro... 30 5.1
AL161636-5|CAI19560.1| 312|Homo sapiens loricrin protein. 30 5.1
AB013076-1|BAA25794.1| 338|Homo sapiens loricrin protein. 30 5.1
BC113435-1|AAI13436.1| 428|Homo sapiens potassium channel tetra... 30 6.8
BC111962-1|AAI11963.1| 428|Homo sapiens potassium channel tetra... 30 6.8
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 30 6.8
AY358197-1|AAQ88564.1| 541|Homo sapiens PGLR9388 protein. 30 6.8
AK056789-1|BAB71285.1| 541|Homo sapiens protein ( Homo sapiens ... 30 6.8
AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor p... 30 6.8
AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor p... 30 6.8
AB037738-1|BAA92555.1| 435|Homo sapiens KIAA1317 protein protein. 30 6.8
M73780-1|AAA36034.1| 769|Homo sapiens integrin beta-8 subunit p... 29 9.0
AK131040-1|BAC85481.1| 328|Homo sapiens protein ( Homo sapiens ... 29 9.0
AF175283-1|AAF25806.1| 246|Homo sapiens zinc metalloendopeptida... 29 9.0
AC004130-1|AAQ96845.1| 769|Homo sapiens unknown protein. 29 9.0
>X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein.
Length = 221
Score = 40.7 bits (91), Expect = 0.004
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
T+ES E+A+D++DG +LDGRELRVQMA
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein.
Length = 221
Score = 40.7 bits (91), Expect = 0.004
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
T+ES E+A+D++DG +LDGRELRVQMA
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein.
Length = 221
Score = 40.7 bits (91), Expect = 0.004
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
T+ES E+A+D++DG +LDGRELRVQMA
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 40.7 bits (91), Expect = 0.004
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
T+ES E+A+D++DG +LDGRELRVQMA
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 40.7 bits (91), Expect = 0.004
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
T+ES E+A+D++DG +LDGRELRVQMA
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 40.7 bits (91), Expect = 0.004
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
T+ES E+A+D++DG +LDGRELRVQMA
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 40.7 bits (91), Expect = 0.004
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
T+ES E+A+D++DG +LDGRELRVQMA
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 variant protein.
Length = 221
Score = 40.7 bits (91), Expect = 0.004
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
T+ES E+A+D++DG +LDGRELRVQMA
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 201
Score = 40.7 bits (91), Expect = 0.004
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
T+ES E+A+D++DG +LDGRELRVQMA
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>AB126070-1|BAD20197.1| 278|Homo sapiens keratin associated protein
protein.
Length = 278
Score = 30.7 bits (66), Expect = 3.9
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = -3
Query: 296 CDCENGRASSWSRSVSGTATDPGCGCASTNASATSNGTCVCGRICFCRVMRVCHNAPS 123
C C G SS SG G GC + +G+ C +C C+ VC P+
Sbjct: 4 CGCSGGCGSSCGGCGSGCG-GCGSGCGGCGSGCGGSGSSCCVPVCCCK--PVCCRVPT 58
>X07979-1|CAA30790.1| 798|Homo sapiens protein ( Human mRNA for
integrin beta 1 subunit. ).
Length = 798
Score = 30.3 bits (65), Expect = 5.1
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Frame = -3
Query: 296 CDCENGRASSWSRSVSG--TATDPGCGCASTNAS--ATSNGTCVCGRICFCR 153
C C GR + + D C N+S ++NG CVCG+ C CR
Sbjct: 489 CRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQ-CVCR 539
>M94077-1|AAA36181.1| 316|Homo sapiens loricrin protein.
Length = 316
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 305 GSGCDCENGRASSWSRSVSGTATDPGCGCASTNASATSNGTCVC 174
GSGC G S S G ++ G GC S+ +S G C
Sbjct: 100 GSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSGC 143
>M61120-1|AAA36180.1| 316|Homo sapiens loricrin protein.
Length = 316
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 305 GSGCDCENGRASSWSRSVSGTATDPGCGCASTNASATSNGTCVC 174
GSGC G S S G ++ G GC S+ +S G C
Sbjct: 100 GSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSGC 143
>CR536555-1|CAG38792.1| 316|Homo sapiens LOR protein.
Length = 316
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 305 GSGCDCENGRASSWSRSVSGTATDPGCGCASTNASATSNGTCVC 174
GSGC G S S G ++ G GC S+ +S G C
Sbjct: 100 GSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSGC 143
>BX537407-1|CAD97649.1| 823|Homo sapiens hypothetical protein
protein.
Length = 823
Score = 30.3 bits (65), Expect = 5.1
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Frame = -3
Query: 296 CDCENGRASSWSRSVSG--TATDPGCGCASTNAS--ATSNGTCVCGRICFCR 153
C C GR + + D C N+S ++NG CVCG+ C CR
Sbjct: 514 CRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQ-CVCR 564
>BC108290-1|AAI08291.1| 316|Homo sapiens LOR protein protein.
Length = 316
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 305 GSGCDCENGRASSWSRSVSGTATDPGCGCASTNASATSNGTCVC 174
GSGC G S S G ++ G GC S+ +S G C
Sbjct: 100 GSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSGC 143
>BC034690-1|AAH34690.1| 316|Homo sapiens LOR protein protein.
Length = 316
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 305 GSGCDCENGRASSWSRSVSGTATDPGCGCASTNASATSNGTCVC 174
GSGC G S S G ++ G GC S+ +S G C
Sbjct: 100 GSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSGC 143
>BC020057-1|AAH20057.1| 798|Homo sapiens integrin, beta 1
(fibronectin receptor, beta polypeptide, antigen CD29
includes protein.
Length = 798
Score = 30.3 bits (65), Expect = 5.1
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Frame = -3
Query: 296 CDCENGRASSWSRSVSG--TATDPGCGCASTNAS--ATSNGTCVCGRICFCR 153
C C GR + + D C N+S ++NG CVCG+ C CR
Sbjct: 489 CRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQ-CVCR 539
>AL365203-2|CAI14426.1| 798|Homo sapiens integrin, beta 1
(fibronectin receptor, beta polypeptide, antigen CD29
includes protein.
Length = 798
Score = 30.3 bits (65), Expect = 5.1
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Frame = -3
Query: 296 CDCENGRASSWSRSVSG--TATDPGCGCASTNAS--ATSNGTCVCGRICFCR 153
C C GR + + D C N+S ++NG CVCG+ C CR
Sbjct: 489 CRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQ-CVCR 539
>AL161636-5|CAI19560.1| 312|Homo sapiens loricrin protein.
Length = 312
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 305 GSGCDCENGRASSWSRSVSGTATDPGCGCASTNASATSNGTCVC 174
GSGC G S S G ++ G GC S+ +S G C
Sbjct: 100 GSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSGC 143
>AB013076-1|BAA25794.1| 338|Homo sapiens loricrin protein.
Length = 338
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 305 GSGCDCENGRASSWSRSVSGTATDPGCGCASTNASATSNGTCVC 174
GSGC G S S G ++ G GC S+ +S G C
Sbjct: 100 GSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSGC 143
>BC113435-1|AAI13436.1| 428|Homo sapiens potassium channel
tetramerisation domain containing 16 protein.
Length = 428
Score = 29.9 bits (64), Expect = 6.8
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Frame = -3
Query: 365 TSGHYWYSHTRQ*F----NAWNENGSGCDCENGRASSWSRSVSGTATDPGCGCASTNASA 198
T W S+T F + W+ + C C+NG+ S + C S + ++
Sbjct: 263 TDDKIWSSYTEYVFYREPSRWSPSHCDCCCKNGKGDKEGESGTSCNDLSTSSCDSQSEAS 322
Query: 197 TSNGTCVCGRI 165
+ T +CG +
Sbjct: 323 SPQETVICGPV 333
>BC111962-1|AAI11963.1| 428|Homo sapiens potassium channel
tetramerisation domain containing 16 protein.
Length = 428
Score = 29.9 bits (64), Expect = 6.8
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Frame = -3
Query: 365 TSGHYWYSHTRQ*F----NAWNENGSGCDCENGRASSWSRSVSGTATDPGCGCASTNASA 198
T W S+T F + W+ + C C+NG+ S + C S + ++
Sbjct: 263 TDDKIWSSYTEYVFYREPSRWSPSHCDCCCKNGKGDKEGESGTSCNDLSTSSCDSQSEAS 322
Query: 197 TSNGTCVCGRI 165
+ T +CG +
Sbjct: 323 SPQETVICGPV 333
>BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein.
Length = 275
Score = 29.9 bits (64), Expect = 6.8
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 65 EEALDSLDGRMLDGRELRVQMA 130
++A ++DG LDGRELRVQ+A
Sbjct: 69 QDAEAAMDGAELDGRELRVQVA 90
>AY358197-1|AAQ88564.1| 541|Homo sapiens PGLR9388 protein.
Length = 541
Score = 29.9 bits (64), Expect = 6.8
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 311 ENGSGCDCENGRASSWSRSVSGTATDPG 228
E GC C GRASS +R + A+DPG
Sbjct: 39 ERPRGCPC-TGRASSLARDSAAAASDPG 65
>AK056789-1|BAB71285.1| 541|Homo sapiens protein ( Homo sapiens
cDNA FLJ32227 fis, clone PLACE6004396. ).
Length = 541
Score = 29.9 bits (64), Expect = 6.8
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 311 ENGSGCDCENGRASSWSRSVSGTATDPG 228
E GC C GRASS +R + A+DPG
Sbjct: 39 ERPRGCPC-TGRASSLARDSAAAASDPG 65
>AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor
protein.
Length = 272
Score = 29.9 bits (64), Expect = 6.8
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 65 EEALDSLDGRMLDGRELRVQMA 130
++A ++DG LDGRELRVQ+A
Sbjct: 59 QDAEAAMDGAELDGRELRVQVA 80
>AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor
protein.
Length = 282
Score = 29.9 bits (64), Expect = 6.8
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 65 EEALDSLDGRMLDGRELRVQMA 130
++A ++DG LDGRELRVQ+A
Sbjct: 69 QDAEAAMDGAELDGRELRVQVA 90
>AB037738-1|BAA92555.1| 435|Homo sapiens KIAA1317 protein protein.
Length = 435
Score = 29.9 bits (64), Expect = 6.8
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Frame = -3
Query: 365 TSGHYWYSHTRQ*F----NAWNENGSGCDCENGRASSWSRSVSGTATDPGCGCASTNASA 198
T W S+T F + W+ + C C+NG+ S + C S + ++
Sbjct: 270 TDDKIWSSYTEYVFYREPSRWSPSHCDCCCKNGKGDKEGESGTSCNDLSTSSCDSQSEAS 329
Query: 197 TSNGTCVCGRI 165
+ T +CG +
Sbjct: 330 SPQETVICGPV 340
>M73780-1|AAA36034.1| 769|Homo sapiens integrin beta-8 subunit
protein.
Length = 769
Score = 29.5 bits (63), Expect = 9.0
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 8/65 (12%)
Frame = -3
Query: 293 DCENGRASSWSRSVSGTATDPGCG---CASTNASATSN-GTCVCGRICFC----RVMRVC 138
+CE GR +S P C ++ S GTCVCGR C C + R C
Sbjct: 566 ECEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRGTCVCGR-CECTDPRSIGRFC 624
Query: 137 HNAPS 123
+ P+
Sbjct: 625 EHCPT 629
>AK131040-1|BAC85481.1| 328|Homo sapiens protein ( Homo sapiens
cDNA FLJ29006 fis, clone STM02533. ).
Length = 328
Score = 29.5 bits (63), Expect = 9.0
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Frame = -3
Query: 299 GCDCENGRASSWSRSVSGTATDPGCGCASTNA--------SATSNGTCVCGRIC 162
GC C R+ W + ++ GC C + SA+S+ C CGR+C
Sbjct: 262 GCCCGRLRSLVWMLLWTSASSSCGCCCGRLRSLVWMLLWTSASSSCGCCCGRLC 315
>AF175283-1|AAF25806.1| 246|Homo sapiens zinc metalloendopeptidase
protein.
Length = 246
Score = 29.5 bits (63), Expect = 9.0
Identities = 10/25 (40%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Frame = -1
Query: 463 CH---YVHYSYVCRCFSELMSYIVP 398
CH ++H+ Y+C+C SEL ++P
Sbjct: 222 CHLQGWIHFKYLCKCVSELKCDLMP 246
>AC004130-1|AAQ96845.1| 769|Homo sapiens unknown protein.
Length = 769
Score = 29.5 bits (63), Expect = 9.0
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 8/65 (12%)
Frame = -3
Query: 293 DCENGRASSWSRSVSGTATDPGCG---CASTNASATSN-GTCVCGRICFC----RVMRVC 138
+CE GR +S P C ++ S GTCVCGR C C + R C
Sbjct: 566 ECEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRGTCVCGR-CECTDPRSIGRFC 624
Query: 137 HNAPS 123
+ P+
Sbjct: 625 EHCPT 629
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,757,113
Number of Sequences: 237096
Number of extensions: 1206126
Number of successful extensions: 3445
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3441
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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