Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_F14
         (452 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    24   2.2  
DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    23   5.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   5.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   5.0  

>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +3

Query: 3   TRRVRSTPRRAFTRD 47
           TRR+R+ P+R+F +D
Sbjct: 90  TRRIRTPPQRSFPKD 104


>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 73  VYVRT*LIASRVKARRGVDRTRLV 2
           VY+R  +    ++ +RG  RTRLV
Sbjct: 71  VYIRLAVFVQFLRTQRGYRRTRLV 94


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 431  FPRLYAHRRRFGRHYRSI 378
            FP+ Y HR  +G H + I
Sbjct: 2216 FPQFYGHRYDYGSHRQLI 2233


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 431  FPRLYAHRRRFGRHYRSI 378
            FP+ Y HR  +G H + I
Sbjct: 2217 FPQFYGHRYDYGSHRQLI 2234


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 472,142
Number of Sequences: 2352
Number of extensions: 9343
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38694201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)