Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_F13
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   1.5  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    25   2.0  
AY341174-1|AAR13738.1|  280|Anopheles gambiae fibrinogen protein.      24   4.6  
AY341173-1|AAR13737.1|  280|Anopheles gambiae fibrinogen protein.      24   4.6  
AY341172-1|AAR13736.1|  280|Anopheles gambiae fibrinogen protein.      24   4.6  
AY341171-1|AAR13735.1|  280|Anopheles gambiae fibrinogen protein.      24   4.6  
AY341170-1|AAR13734.1|  280|Anopheles gambiae fibrinogen protein.      24   4.6  
AY341169-1|AAR13733.1|  280|Anopheles gambiae fibrinogen protein.      24   4.6  
AY341168-1|AAR13732.1|  280|Anopheles gambiae fibrinogen protein.      24   4.6  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   4.6  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   4.6  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    24   4.6  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   6.1  
AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.      23   6.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   6.1  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = +3

Query: 105 KTKFGPLADCDRIFTNLYGRHEWRLKGALSRGDWYLTKEILLKGTDWIVSELKTSGLRGR 284
           + K   + D     T L  R  WR+  AL+  D  + +  +++G     S    S + GR
Sbjct: 160 RNKRTSIVDITFCSTTLSERLNWRVSDALTLSDHNVVRYAIIQGHRLTSSSAHGSRVGGR 219

Query: 285 G 287
           G
Sbjct: 220 G 220


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 131 VCQRSKLRFGWSLC 90
           V  R K+R GWS+C
Sbjct: 394 VAARGKIRIGWSIC 407


>AY341174-1|AAR13738.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 326 HEGPFHSCRETSTASTTK 273
           H+GPF SCR+  +  + K
Sbjct: 103 HKGPFESCRDEPSKMSGK 120


>AY341173-1|AAR13737.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 326 HEGPFHSCRETSTASTTK 273
           H+GPF SCR+  +  + K
Sbjct: 103 HKGPFESCRDEPSKMSGK 120


>AY341172-1|AAR13736.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 326 HEGPFHSCRETSTASTTK 273
           H+GPF SCR+  +  + K
Sbjct: 103 HKGPFESCRDEPSKMSGK 120


>AY341171-1|AAR13735.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 326 HEGPFHSCRETSTASTTK 273
           H+GPF SCR+  +  + K
Sbjct: 103 HKGPFESCRDEPSKMSGK 120


>AY341170-1|AAR13734.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 326 HEGPFHSCRETSTASTTK 273
           H+GPF SCR+  +  + K
Sbjct: 103 HKGPFESCRDEPSKMSGK 120


>AY341169-1|AAR13733.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 326 HEGPFHSCRETSTASTTK 273
           H+GPF SCR+  +  + K
Sbjct: 103 HKGPFESCRDEPSKMSGK 120


>AY341168-1|AAR13732.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 326 HEGPFHSCRETSTASTTK 273
           H+GPF SCR+  +  + K
Sbjct: 103 HKGPFESCRDEPSKMSGK 120


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 13/49 (26%), Positives = 19/49 (38%)
 Frame = -1

Query: 149 CENPVAVCQRSKLRFGWSLCLLVTHRYIAAGCQWTNNS*MCFGSLNDPR 3
           C+   +      LR      L VT R+   G  W N+  +CF  +   R
Sbjct: 192 CQPAGSTSDSGTLRAAAMDVLFVTARHSEHGMLWVNHLKVCFDKITKQR 240


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +3

Query: 21  TKTHLGVIGPLATSSNVPVRYQQTQAPAKTKFGPLADCDRIFTNLYG 161
           TK H+   G    ++      +  +A AKT    +A+ DRI  N+ G
Sbjct: 32  TKYHVDT-GLFTVATRSETVQELYEAAAKTPVATIAEMDRIMGNIAG 77


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +3

Query: 21  TKTHLGVIGPLATSSNVPVRYQQTQAPAKTKFGPLADCDRIFTNLYG 161
           TK H+   G    ++      +  +A AKT    +A+ DRI  N+ G
Sbjct: 32  TKYHVDT-GLFTVATRSETVQELYEAAAKTPVATIAEMDRIMGNIAG 77


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 111 KFGPLADCDRIFTNLYGRHEWRLKGA 188
           +F  L DCD  FT+ Y     R +GA
Sbjct: 677 RFRGLMDCDERFTSAYQFAVLRYRGA 702


>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
 Frame = -2

Query: 382 SPSSALTTKYFGR--PSDGLFMKDHFIPVGKPAPPRPRRPDVFNSLTIQSVPFSRI 221
           +P   L TK   +  PS G   K H    G  A    RR      L I+ +PF R+
Sbjct: 16  APRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRL 71


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +3

Query: 270 GLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADEGEPG 389
           G +G  G   P G++    ++  DG P Y  +    G PG
Sbjct: 130 GEKGTKGEPGPVGLQGPKGDRGRDGLPGYPGIPGTNGVPG 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 763,459
Number of Sequences: 2352
Number of extensions: 17671
Number of successful extensions: 57
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)