Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_F13
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50109-8|CAA90435.1| 479|Caenorhabditis elegans Hypothetical pr... 319 1e-87
Z67754-2|CAA91752.2| 677|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z73896-8|CAA98061.1| 525|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical p... 32 0.40
Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical p... 32 0.40
Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical p... 32 0.40
AC024799-1|AAK72316.1| 349|Caenorhabditis elegans Serpentine re... 30 1.6
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 29 2.1
Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical pr... 29 2.8
U37430-2|AAL08045.2| 802|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF039044-4|AAG24122.3| 328|Caenorhabditis elegans Serpentine re... 29 3.7
Z68160-4|CAA92292.1| 583|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 27 8.5
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 27 8.5
>Z50109-8|CAA90435.1| 479|Caenorhabditis elegans Hypothetical
protein C09H10.3 protein.
Length = 479
Score = 319 bits (783), Expect = 1e-87
Identities = 148/210 (70%), Positives = 171/210 (81%)
Frame = +3
Query: 6 RVIQGTKTHLGVIGPLATSSNVPVRYQQTQAPAKTKFGPLADCDRIFTNLYGRHEWRLKG 185
R+I + V G + ++ N + +Q KT FG L D DRIFTNLYGRH++RLKG
Sbjct: 11 RLIGQNVPKVAVRGVVTSAQNANAQVKQE----KTSFGNLKDSDRIFTNLYGRHDYRLKG 66
Query: 186 ALSRGDWYLTKEILLKGTDWIVSELKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVV 365
A++RGDW+ TKEI+LKG+DWI+ ELKTSGLRGRGGAGFP+GMKW FMNKP DGRPKYLVV
Sbjct: 67 AMARGDWHKTKEIILKGSDWILGELKTSGLRGRGGAGFPSGMKWGFMNKPFDGRPKYLVV 126
Query: 366 NADEGEPGTCKDREIMRHDPHKLVEGCLIAGKAMGAQAAYIYIRGEFYNEASNLQVAIAE 545
NADEGEPGTCKDREIMRHDPHKL+EGCLI G AMGA+AAYIYIRGEFYNEA LQ AI E
Sbjct: 127 NADEGEPGTCKDREIMRHDPHKLIEGCLIGGVAMGARAAYIYIRGEFYNEACILQEAINE 186
Query: 546 AYQAGLIGKNACGSRYDFDVXVHRGAGAYI 635
AY+AG +GK+ G+ Y+FDV VHRGAGAYI
Sbjct: 187 AYKAGYLGKDCLGTGYNFDVFVHRGAGAYI 216
>Z67754-2|CAA91752.2| 677|Caenorhabditis elegans Hypothetical
protein C34E11.2 protein.
Length = 677
Score = 32.3 bits (70), Expect = 0.30
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 310 IPVGKPAPPRPRRPDVFNSLTIQSVPFSRIS 218
IP+ P PP PR P N L S+P+++I+
Sbjct: 492 IPMSSPPPPLPRTPQPNNGLPNASLPYNQIN 522
>Z73896-8|CAA98061.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 548 CLSNSHLKVTGFIIKFTSNI--NICCLCSHSFTSNKTAFYK 432
CL NSH V I++F SN ++ HS T N AF K
Sbjct: 277 CLMNSHFHVDPKILQFISNTVEHLAIAVGHSLTINSLAFLK 317
>Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 548 CLSNSHLKVTGFIIKFTSNI--NICCLCSHSFTSNKTAFYK 432
CL NSH V I++F SN ++ HS T N AF K
Sbjct: 277 CLMNSHFHVDPKILQFISNTVEHLAIAVGHSLTINSLAFLK 317
>Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical
protein B0564.6b protein.
Length = 423
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 548 CLSNSHLKVTGFIIKFTSNI--NICCLCSHSFTSNKTAFYK 432
CL NSH V I++F SN ++ HS T N AF K
Sbjct: 175 CLMNSHFHVDPKILQFISNTVEHLAIAVGHSLTINSLAFLK 215
>Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.6a protein.
Length = 525
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 548 CLSNSHLKVTGFIIKFTSNI--NICCLCSHSFTSNKTAFYK 432
CL NSH V I++F SN ++ HS T N AF K
Sbjct: 277 CLMNSHFHVDPKILQFISNTVEHLAIAVGHSLTINSLAFLK 317
>AC024799-1|AAK72316.1| 349|Caenorhabditis elegans Serpentine
receptor, class x protein4 protein.
Length = 349
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = -1
Query: 575 ILTYETCLVCLSNSHLKVTGFIIKFTSNINICC--LCSHSFTSNKTAFYKLMGIMAHDLS 402
I T+ T ++ + S GF+ K + N+CC + H++ S Y ++ +A+ +
Sbjct: 121 IFTFRTTILLIVLSIPVSLGFMFK-SQYWNLCCTFVYDHNYLSYS---YNVIEGVANSSN 176
Query: 401 IFTCPRFTLISINYQVFWASIRWFVHE 321
F P L S+ F+ I W VH+
Sbjct: 177 NFDVPLNALSSVVSAFFYVMIFWTVHK 203
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = -1
Query: 554 LVCLSNSHLKVTGFIIKFTSNINICCLCSHSFTSNKTAFYKLMGIMAHDLSIFTCPRFTL 375
L L + L +TG+ TS NI L S S + G + F CP+ L
Sbjct: 882 LKILKTTQLSITGYSNTITSQSNIYHLSLKSTDSKSPFEMHIAGTPHLPKTPFMCPKLNL 941
Query: 374 ISINY 360
+NY
Sbjct: 942 EDLNY 946
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = -1
Query: 554 LVCLSNSHLKVTGFIIKFTSNINICCLCSHSFTSNKTAFYKLMGIMAHDLSIFTCPRFTL 375
L L + L +TG+ TS NI L S S + G + F CP+ L
Sbjct: 882 LKILKTTQLSITGYSNTITSQSNIYHLSLKSTDSKSPFEMHIAGTPHLPKTPFMCPKLNL 941
Query: 374 ISINY 360
+NY
Sbjct: 942 EDLNY 946
>Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical
protein F53C11.5c protein.
Length = 830
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 352 FGRPSDGLFMKDHFIPVGKPAPPRP-RRPDVFNSLTIQSVPFSR 224
FGR + +M H P PAPP P RP +F+ +++V SR
Sbjct: 129 FGRENSREYMYLHRSPTTNPAPPSPLMRPKLFHQ-RLETVTDSR 171
>Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical
protein F53C11.5b protein.
Length = 891
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 352 FGRPSDGLFMKDHFIPVGKPAPPRP-RRPDVFNSLTIQSVPFSR 224
FGR + +M H P PAPP P RP +F+ +++V SR
Sbjct: 190 FGRENSREYMYLHRSPTTNPAPPSPLMRPKLFHQ-RLETVTDSR 232
>Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical
protein F53C11.5a protein.
Length = 855
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 352 FGRPSDGLFMKDHFIPVGKPAPPRP-RRPDVFNSLTIQSVPFSR 224
FGR + +M H P PAPP P RP +F+ +++V SR
Sbjct: 154 FGRENSREYMYLHRSPTTNPAPPSPLMRPKLFHQ-RLETVTDSR 196
>U37430-2|AAL08045.2| 802|Caenorhabditis elegans Hypothetical
protein K09F5.6 protein.
Length = 802
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 252 SELKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADEGEPGTCKD 401
SE K SG+ G G G ++W + + G+P L+ N G K+
Sbjct: 751 SENKGSGIYGTSGIGSGNNVQWGGAQRAAPGQPGQLLWNPPGATNGHNKE 800
>AF039044-4|AAG24122.3| 328|Caenorhabditis elegans Serpentine
receptor, class t protein17 protein.
Length = 328
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = -1
Query: 596 IITGPACILTYETCLVCLSNSHLKVTGFIIKFTSNINICCLCSHSFTSNKTAFYKLMGIM 417
+ TG ++ Y CL+ + S ++ K + IC +CS S T + +MG++
Sbjct: 53 LTTGMLILILYTICLIAIIKSD-QIRTPAYKTMIFLGICDICSTFVHSITTGIFGIMGVV 111
Query: 416 AHDLSI 399
D +
Sbjct: 112 YCDFPL 117
>Z68160-4|CAA92292.1| 583|Caenorhabditis elegans Hypothetical
protein D1046.4 protein.
Length = 583
Score = 28.3 bits (60), Expect = 4.9
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = -2
Query: 484 YAACAPIALPAIRQPSTSLWGSWRMISLSLHVP--GSPSSALTTKYFGRPSDGLFMKDHF 311
+ + A LP + +T W +WR I L V GS T F + SD D
Sbjct: 440 FGSFASNILPLVLGRNTESWNNWRWIWLVFAVLLIGSVILFWLTFQFEK-SDW----DIV 494
Query: 310 IPVGKPAPPRP 278
IPV P PPRP
Sbjct: 495 IPVEPPQPPRP 505
>Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical
protein C09H6.3 protein.
Length = 593
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -1
Query: 560 TCLVCLSNSHLKVTGFIIKFTSNINICCLCSHSFTSNKTA--FYKLMGIMAHDLSIFT 393
+C L N+ ++ F T+ +N C L SH + A F++L G+ LS+ T
Sbjct: 440 SCSQMLKNNVKLLSAFFAYITNKLNECKLLSHEVLDDSKAEDFFRLHGLGLLLLSLVT 497
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 402 REIMRHDPHKLVEGCLIAGKAMGAQAAYIYIRGEFYNEASNLQVAIA 542
+E M H+P L+EG L + +G+ RG + Q A+A
Sbjct: 563 KETMVHEPAVLIEGVLFRARYLGSTQMLCESRGSKAARMAQAQEAVA 609
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 402 REIMRHDPHKLVEGCLIAGKAMGAQAAYIYIRGEFYNEASNLQVAIA 542
+E M H+P L+EG L + +G+ RG + Q A+A
Sbjct: 591 KETMVHEPAVLIEGVLFRARYLGSTQMLCESRGSKAARMAQAQEAVA 637
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 402 REIMRHDPHKLVEGCLIAGKAMGAQAAYIYIRGEFYNEASNLQVAIA 542
+E M H+P L+EG L + +G+ RG + Q A+A
Sbjct: 563 KETMVHEPAVLIEGVLFRARYLGSTQMLCESRGSKAARMAQAQEAVA 609
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,175,160
Number of Sequences: 27780
Number of extensions: 378165
Number of successful extensions: 1145
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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