Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_F12
(357 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08545-1|CAA69849.1| 533|Homo sapiens complement 9 protein. 31 1.4
X02176-1|CAA26117.1| 559|Homo sapiens protein ( Human mRNA frag... 31 1.4
K02766-1|AAA51889.1| 557|Homo sapiens C9 protein. 31 1.4
BC020721-1|AAH20721.1| 559|Homo sapiens complement component 9 ... 31 1.4
BX537517-1|CAD97770.1| 295|Homo sapiens hypothetical protein pr... 29 5.6
BC039121-1|AAH39121.1| 510|Homo sapiens SYNE1 protein protein. 29 5.6
AL357081-3|CAI41324.1| 675|Homo sapiens RP11-809I23.2 protein. 29 5.6
AL049548-6|CAI42747.1| 675|Homo sapiens RP11-809I23.2 protein. 29 5.6
AK056122-1|BAB71097.1| 560|Homo sapiens protein ( Homo sapiens ... 29 5.6
AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein. 29 5.6
AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein. 29 5.6
U82948-1|AAB41767.1| 126|Homo sapiens anti-gp120 antibody IgG h... 28 7.4
BX538130-1|CAD98031.1| 986|Homo sapiens hypothetical protein pr... 28 9.8
BC060862-1|AAH60862.1| 985|Homo sapiens ring finger protein 111... 28 9.8
BC020984-1|AAH20984.1| 441|Homo sapiens RNF111 protein protein. 28 9.8
AK131488-1|BAD18633.1| 602|Homo sapiens protein ( Homo sapiens ... 28 9.8
AK131304-1|BAD18471.1| 994|Homo sapiens protein ( Homo sapiens ... 28 9.8
AK095327-1|BAC04531.1| 370|Homo sapiens protein ( Homo sapiens ... 28 9.8
>Y08545-1|CAA69849.1| 533|Homo sapiens complement 9 protein.
Length = 533
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 120 YEGKLELFSGVVIEKDASGQNKLNVKFEPGELREAARTFEQARGKI 257
YE ++E F ++ EK ++ +++KF P E +A + E+ I
Sbjct: 191 YEEQIEAFKSIIQEKTSNFNAAISLKFTPTETNKAEQCCEETASSI 236
>X02176-1|CAA26117.1| 559|Homo sapiens protein ( Human mRNA
fragment for complement component C9. ).
Length = 559
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 120 YEGKLELFSGVVIEKDASGQNKLNVKFEPGELREAARTFEQARGKI 257
YE ++E F ++ EK ++ +++KF P E +A + E+ I
Sbjct: 217 YEEQIEAFKSIIQEKTSNFNAAISLKFTPTETNKAEQCCEETASSI 262
>K02766-1|AAA51889.1| 557|Homo sapiens C9 protein.
Length = 557
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 120 YEGKLELFSGVVIEKDASGQNKLNVKFEPGELREAARTFEQARGKI 257
YE ++E F ++ EK ++ +++KF P E +A + E+ I
Sbjct: 216 YEEQIEAFKSIIQEKTSNFNAAISLKFTPTETNKAEQCCEETASSI 261
>BC020721-1|AAH20721.1| 559|Homo sapiens complement component 9
protein.
Length = 559
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 120 YEGKLELFSGVVIEKDASGQNKLNVKFEPGELREAARTFEQARGKI 257
YE ++E F ++ EK ++ +++KF P E +A + E+ I
Sbjct: 217 YEEQIEAFKSIIQEKTSNFNAAISLKFTPTETNKAEQCCEETASSI 262
>BX537517-1|CAD97770.1| 295|Homo sapiens hypothetical protein
protein.
Length = 295
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 156 IEKDASGQNKLNVKFEPGELREAARTFEQARGKIMKYT 269
+ + +GQ+KLN+ GEL T E+A+G K T
Sbjct: 179 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 216
>BC039121-1|AAH39121.1| 510|Homo sapiens SYNE1 protein protein.
Length = 510
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 156 IEKDASGQNKLNVKFEPGELREAARTFEQARGKIMKYT 269
+ + +GQ+KLN+ GEL T E+A+G K T
Sbjct: 227 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 264
>AL357081-3|CAI41324.1| 675|Homo sapiens RP11-809I23.2 protein.
Length = 675
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 156 IEKDASGQNKLNVKFEPGELREAARTFEQARGKIMKYT 269
+ + +GQ+KLN+ GEL T E+A+G K T
Sbjct: 211 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 248
>AL049548-6|CAI42747.1| 675|Homo sapiens RP11-809I23.2 protein.
Length = 675
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 156 IEKDASGQNKLNVKFEPGELREAARTFEQARGKIMKYT 269
+ + +GQ+KLN+ GEL T E+A+G K T
Sbjct: 211 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 248
>AK056122-1|BAB71097.1| 560|Homo sapiens protein ( Homo sapiens
cDNA FLJ31560 fis, clone NT2RI2001409, weakly similar to
DYSTROPHIN. ).
Length = 560
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 156 IEKDASGQNKLNVKFEPGELREAARTFEQARGKIMKYT 269
+ + +GQ+KLN+ GEL T E+A+G K T
Sbjct: 193 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 230
>AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.
Length = 8749
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 156 IEKDASGQNKLNVKFEPGELREAARTFEQARGKIMKYT 269
+ + +GQ+KLN+ GEL T E+A+G K T
Sbjct: 3118 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 3155
>AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.
Length = 8797
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 156 IEKDASGQNKLNVKFEPGELREAARTFEQARGKIMKYT 269
+ + +GQ+KLN+ GEL T E+A+G K T
Sbjct: 3111 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 3148
>U82948-1|AAB41767.1| 126|Homo sapiens anti-gp120 antibody IgG
heavy chain V region protein.
Length = 126
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 301 YCRGGPSLRWFDITGD*TL 357
YC GP +RWFD G TL
Sbjct: 88 YCAKGPLMRWFDDWGQGTL 106
>BX538130-1|CAD98031.1| 986|Homo sapiens hypothetical protein
protein.
Length = 986
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 150 HQRIAPVSLHIHSPPLVQPCKLPPCIIPNTIHAFSQNL 37
HQ A H + PP QP +IP+ +HAF +
Sbjct: 659 HQASACPHSHGNPPPQTQPPPQVDYVIPHPVHAFHSQI 696
>BC060862-1|AAH60862.1| 985|Homo sapiens ring finger protein 111
protein.
Length = 985
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 150 HQRIAPVSLHIHSPPLVQPCKLPPCIIPNTIHAFSQNL 37
HQ A H + PP QP +IP+ +HAF +
Sbjct: 658 HQASACPHSHGNPPPQTQPPPQVDYVIPHPVHAFHSQI 695
>BC020984-1|AAH20984.1| 441|Homo sapiens RNF111 protein protein.
Length = 441
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 150 HQRIAPVSLHIHSPPLVQPCKLPPCIIPNTIHAFSQNL 37
HQ A H + PP QP +IP+ +HAF +
Sbjct: 106 HQASACPHSHGNPPPQTQPPPQVDYVIPHPVHAFHSQI 143
>AK131488-1|BAD18633.1| 602|Homo sapiens protein ( Homo sapiens
cDNA FLJ16671 fis, clone THYMU3001428. ).
Length = 602
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 150 HQRIAPVSLHIHSPPLVQPCKLPPCIIPNTIHAFSQNL 37
HQ A H + PP QP +IP+ +HAF +
Sbjct: 258 HQASACPHSHGNPPPQTQPPPQVDYVIPHPVHAFHSQI 295
>AK131304-1|BAD18471.1| 994|Homo sapiens protein ( Homo sapiens
cDNA FLJ16278 fis, clone NT2RI3001132, highly similar
to Mus musculus Arkadia (Arkadia) mRNA. ).
Length = 994
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 150 HQRIAPVSLHIHSPPLVQPCKLPPCIIPNTIHAFSQNL 37
HQ A H + PP QP +IP+ +HAF +
Sbjct: 659 HQASACPHSHGNPPPQTQPPPQVDYVIPHPVHAFHSQI 696
>AK095327-1|BAC04531.1| 370|Homo sapiens protein ( Homo sapiens
cDNA FLJ38008 fis, clone CTONG2012452, highly similar to
Mus musculus Arkadia (Arkadia) mRNA. ).
Length = 370
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 150 HQRIAPVSLHIHSPPLVQPCKLPPCIIPNTIHAFSQNL 37
HQ A H + PP QP +IP+ +HAF +
Sbjct: 35 HQASACPHSHGNPPPQTQPPPQVDYVIPHPVHAFHSQI 72
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,299,595
Number of Sequences: 237096
Number of extensions: 978573
Number of successful extensions: 2316
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2316
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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