Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_F11
(449 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces po... 188 3e-49
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 181 5e-47
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 28 0.58
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 27 1.0
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 27 1.0
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 27 1.0
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 27 1.8
SPBC1683.05 |||thiamine transporter |Schizosaccharomyces pombe|c... 25 4.1
SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyce... 25 4.1
SPAC21E11.08 |lcb2|SPAC2C4.02|serine palmitoyltransferase |Schiz... 25 4.1
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 25 4.1
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 25 5.4
SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual 25 5.4
SPBP35G2.04c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 5.4
SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomy... 25 7.1
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 25 7.1
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 25 7.1
SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharom... 25 7.1
SPBC11C11.07 |rpl1801|rpl18-1, rpl18|60S ribosomal protein L18|S... 25 7.1
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 24 9.4
SPAPB17E12.13 |rpl1802|rpl18-2|60S ribosomal protein L18|Schizos... 24 9.4
SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual 24 9.4
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 24 9.4
>SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 188 bits (458), Expect = 3e-49
Identities = 91/146 (62%), Positives = 112/146 (76%), Gaps = 2/146 (1%)
Frame = +2
Query: 17 ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQ--MAKEYRVKVEKELRE 190
EL+ EERNLLSVAYKNV+GARR+SWR++SSIEQK E Q + KEYR K+E+EL
Sbjct: 38 ELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDT 97
Query: 191 ICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGESRHSVVEDSQKAYQDA 370
IC D+L +L+KHLIP A++ ESKVFY KMKGDYYRYLAE A GE R + S + Y+ A
Sbjct: 98 ICQDILTVLEKHLIPNAASAESKVFYYKMKGDYYRYLAEFAVGEKRQHSADQSLEGYKAA 157
Query: 371 FEISKAKMQPTHPIRLGVASHFSVFY 448
EI+ A++ PTHPIRLG+A +FSVFY
Sbjct: 158 SEIATAELAPTHPIRLGLALNFSVFY 183
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 181 bits (440), Expect = 5e-47
Identities = 88/146 (60%), Positives = 112/146 (76%), Gaps = 2/146 (1%)
Frame = +2
Query: 17 ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--WSERKQQMAKEYRVKVEKELRE 190
+LS EERNLLSVAYKN++GARR+SWR+ISSIEQK E + R+ + KEYR K+E EL +
Sbjct: 37 KLSVEERNLLSVAYKNIIGARRASWRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSD 96
Query: 191 ICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGESRHSVVEDSQKAYQDA 370
IC+DVL +L+KHLIP A+ ESKVFY KMKGDYYRYLAE GE + S +AY+ A
Sbjct: 97 ICHDVLSVLEKHLIPAATTGESKVFYYKMKGDYYRYLAEFTVGEVCKEAADSSLEAYKAA 156
Query: 371 FEISKAKMQPTHPIRLGVASHFSVFY 448
+I+ A++ PT P+RLG+A +FSVFY
Sbjct: 157 SDIAVAELPPTDPMRLGLALNFSVFY 182
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1207
Score = 28.3 bits (60), Expect = 0.58
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Frame = +2
Query: 41 LLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYR-VKVEKELR-EICYDVLCL 214
L+S +N A RS + + I + S + ++ + YR VK K L +IC+ +
Sbjct: 968 LVSYVRRNAETAERS--QALPFITRNLA-SIKSHELHEAYRLVKANKILEAQICFRSIIY 1024
Query: 215 LDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATG-ESRHSVVEDSQKAYQDAFEISKAK 391
L L A++ E + + RY+ ++ E R ED+++A + ++ + A
Sbjct: 1025 LA--LTTVANSEEEADEISALIDECCRYIVALSCELERRRLGEEDTKRALELSYYFASAD 1082
Query: 392 MQPTHPI---RLGV-ASH 433
+QP H I RL + ASH
Sbjct: 1083 LQPMHSIIALRLAINASH 1100
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 27.5 bits (58), Expect = 1.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 36 ETFFPLLIKMWSAPDGHHGESFPLLNRKPN 125
E F P L++ +A D +GE+ LL R+PN
Sbjct: 104 EVFLPQLLRYPNASDPLNGEAAALLLREPN 133
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1778
Score = 27.5 bits (58), Expect = 1.0
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +2
Query: 212 LLDKHLIPKASNPESKVFYLKMKGDYYR---YLAEVATGESRHSVVEDS 349
+++K IP++ E+K Y + GD+ +L E A E H V+ D+
Sbjct: 1608 MIEKLCIPESWLNEAKALYARYVGDHLNELYFLQEAALYEDAHKVLLDT 1656
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.5 bits (58), Expect = 1.0
Identities = 22/83 (26%), Positives = 34/83 (40%)
Frame = +2
Query: 200 DVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGESRHSVVEDSQKAYQDAFEI 379
DV+C + L+P PE K+FY + +G S SQ+ D +EI
Sbjct: 178 DVICGKEAFLLPLNEYPEYKLFY------------PIKSGVFNESDYASSQQLLADIYEI 225
Query: 380 SKAKMQPTHPIRLGVASHFSVFY 448
K + I + S +SV +
Sbjct: 226 FKYSITSLLQIPVSQLSQYSVIF 248
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 26.6 bits (56), Expect = 1.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 232 YKVLVQ*TQDIIADFSELLFYFNPIFFCHLL 140
+ L Q ++++I +EL F+ F CHLL
Sbjct: 1755 FHALSQPSRELICKMTELNFFAADFFLCHLL 1785
>SPBC1683.05 |||thiamine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 559
Score = 25.4 bits (53), Expect = 4.1
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -2
Query: 409 WVCGLHFCLADLKSILVCFL*ILYNRMSAF-SCGHFCEIPVVISLHFEVKYFTFWITSFR 233
++ GL + ++ + C ILY +F S + I+ F + YF +W+ SF
Sbjct: 152 FIAGLFYYGTNVYTGAECVQTILYAIFKSFRSYKNRLPADAGITSDFLISYFVYWVISFP 211
Query: 232 YKVL 221
+ ++
Sbjct: 212 FHLI 215
>SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 25.4 bits (53), Expect = 4.1
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +2
Query: 203 VLCLLDKHLIPKASN-PESKVFYLKMKGD--YYRYL 301
VL L+ L+ A+ PE K+FY K GD Y +YL
Sbjct: 509 VLMQLESFLLNIANPAPEGKLFYEKQTGDNPYLKYL 544
>SPAC21E11.08 |lcb2|SPAC2C4.02|serine palmitoyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 603
Score = 25.4 bits (53), Expect = 4.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2
Query: 313 GHFCEIPVVISLHFEVKYFTF 251
G+FC++P V+ L K++ F
Sbjct: 341 GNFCDLPKVVELKNRYKFYLF 361
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 25.4 bits (53), Expect = 4.1
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +2
Query: 224 HLIPKASNPESKVFYLKMKGDYYRYLAEVATGESRHSVVEDS 349
H SNP S K KG++ Y A G ++ +DS
Sbjct: 225 HTSKTYSNPSSFATRKKEKGEHLSYAEAAAVGTQAKNIKKDS 266
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 25.0 bits (52), Expect = 5.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 59 KNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVE 175
KN+ S+ R +SS + K +E + M +Y K+E
Sbjct: 350 KNLENDEESTLRALSSFQSKIRNAEDEDVMDSQYGSKIE 388
>SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual
Length = 653
Score = 25.0 bits (52), Expect = 5.4
Identities = 14/70 (20%), Positives = 30/70 (42%)
Frame = -2
Query: 340 YNRMSAFSCGHFCEIPVVISLHFEVKYFTFWITSFRYKVLVQ*TQDIIADFSELLFYFNP 161
YN M F ++ + + + V+Y W+ +V ++ ++ I ++ L N
Sbjct: 266 YNMMDIFVSARQVDLRLQQACFWPVQYMKLWVFRKSKRVAIEDYKEYIRFYNNLWLVAND 325
Query: 160 IFFCHLLFSF 131
+ F + SF
Sbjct: 326 MIFGITMSSF 335
>SPBP35G2.04c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 249
Score = 25.0 bits (52), Expect = 5.4
Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = -2
Query: 298 IPVVISLHFEVKYFT-FWIT 242
+P++I LHF K FT W+T
Sbjct: 62 LPILIRLHFYKKLFTILWLT 81
>SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 24.6 bits (51), Expect = 7.1
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 17 ELSNEERN-LLSVAYKNVVGARRSSWRVIS 103
E+SN+E N LL + YK V S+W S
Sbjct: 39 EVSNDEDNQLLELGYKPVFKREFSTWATFS 68
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 24.6 bits (51), Expect = 7.1
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 30 KKETFFPLLIKMWSAPDGHHGESFPLLNRKPNGRKEN 140
+K FF LLI +++ SF +++ NG+ N
Sbjct: 12 RKFVFFSLLILLFAHGASSSSSSFNYFDKRTNGKANN 48
>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1096
Score = 24.6 bits (51), Expect = 7.1
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -3
Query: 153 FAICC--FLSDHSVFCSIEEMTRHDDR 79
F CC F+S +S+F S++E ++R
Sbjct: 221 FYSCCIVFISSYSIFLSVKESKESENR 247
>SPBC16C6.06 |pep1|vps10|sorting receptor for
CPY|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1466
Score = 24.6 bits (51), Expect = 7.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 298 SRRSGHRRKQTFCCRGFTE 354
++R HR QTF C F E
Sbjct: 677 NKRDSHREPQTFNCDSFNE 695
>SPBC11C11.07 |rpl1801|rpl18-1, rpl18|60S ribosomal protein
L18|Schizosaccharomyces pombe|chr 2|||Manual
Length = 187
Score = 24.6 bits (51), Expect = 7.1
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 215 LDKHLIPKA--SNPESKVFYLKMKGDYYRYLA 304
+++H + K+ S P S+ YLK+ YR+LA
Sbjct: 5 IERHHVKKSQRSKPASENVYLKLLVKLYRFLA 36
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 24.2 bits (50), Expect = 9.4
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 47 SVAYKNVVGARRSSWRVISSIEQKTEWSE---RKQQMAKEYRVKVEKELR 187
SV+ + +R S+ S E + E SE R+Q++ +E R + EK+LR
Sbjct: 358 SVSSEERSRSRAGSFSHHSESENEDEDSEAFRRRQELRRERRRQAEKDLR 407
>SPAPB17E12.13 |rpl1802|rpl18-2|60S ribosomal protein
L18|Schizosaccharomyces pombe|chr 1|||Manual
Length = 187
Score = 24.2 bits (50), Expect = 9.4
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 215 LDKHLIPKA--SNPESKVFYLKMKGDYYRYLA 304
+++H + K+ S P S+ YLK+ YR+LA
Sbjct: 5 IERHHVRKSQRSKPASENVYLKLLVKLYRFLA 36
>SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 24.2 bits (50), Expect = 9.4
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 105 LLNRKPNGRKE-NNRWQKNIGLK*KRSSEKSAM 200
L+NRK NG + +NR ++N L+ KRS E++ +
Sbjct: 75 LINRKENGSHQVSNRAERN-RLQLKRSLERAGI 106
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 24.2 bits (50), Expect = 9.4
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +2
Query: 131 ERKQQMAKEYRVKVEKELREICYDV--LCLLDKHLIPKASNPE 253
E++Q A +YR+KVE+ +I V + L+ L + SNPE
Sbjct: 85 EQEQNEANDYRLKVERLEHKISDYVQEINSLNSQLQIQKSNPE 127
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,036,433
Number of Sequences: 5004
Number of extensions: 42002
Number of successful extensions: 137
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 166231220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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