Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_F11
(449 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 186 7e-48
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 184 4e-47
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 182 2e-46
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 179 8e-46
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 174 2e-44
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 173 7e-44
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 120 5e-28
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 87 6e-18
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 30 0.75
12_02_0977 + 24999211-25000275,25000375-25000521,25000805-25001179 29 2.3
10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097 29 2.3
05_01_0599 + 5368091-5368123,5368212-5368383,5369237-5369335,536... 28 3.0
07_03_0021 - 12521013-12521116,12521476-12521533,12522418-125225... 28 4.0
01_06_0406 + 29113033-29113119,29113250-29113309,29114104-291141... 28 4.0
08_02_0721 + 20401217-20401360,20401689-20401809,20401969-204020... 27 5.3
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 27 5.3
08_02_0812 - 21444112-21444273,21444374-21444488,21445369-214454... 27 7.0
05_05_0127 - 22580720-22580808,22580936-22580987,22581703-225819... 27 7.0
02_05_1241 - 35189111-35189389,35189604-35189711,35189982-351907... 27 7.0
02_05_0483 - 29391929-29392256,29393048-29393148,29393640-293938... 27 7.0
12_01_0915 - 8908643-8908756,8909086-8909203,8909570-8909682,891... 27 9.2
03_02_0445 - 8551912-8552047,8552729-8552896,8553785-8554068,855... 27 9.2
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 186 bits (453), Expect = 7e-48
Identities = 91/146 (62%), Positives = 113/146 (77%), Gaps = 2/146 (1%)
Frame = +2
Query: 17 ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--WSERKQQMAKEYRVKVEKELRE 190
EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK E +E + + KEYR K+E EL +
Sbjct: 261 ELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSK 320
Query: 191 ICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGESRHSVVEDSQKAYQDA 370
IC +L LLD HL+P ++ PESKVFYLKMKGDYYRYLAE TG R E++ AY+ A
Sbjct: 321 ICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAA 380
Query: 371 FEISKAKMQPTHPIRLGVASHFSVFY 448
+I+ A++ PTHPIRLG+A +FSVFY
Sbjct: 381 QDIALAELPPTHPIRLGLALNFSVFY 406
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 184 bits (447), Expect = 4e-47
Identities = 89/146 (60%), Positives = 113/146 (77%), Gaps = 2/146 (1%)
Frame = +2
Query: 17 ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--WSERKQQMAKEYRVKVEKELRE 190
EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK E +E + + K+YR K+E EL +
Sbjct: 43 ELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTK 102
Query: 191 ICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGESRHSVVEDSQKAYQDA 370
IC +L LL+ HL+P ++ PESKVFYLKMKGDYYRYLAE TG R E++ AY+ A
Sbjct: 103 ICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAA 162
Query: 371 FEISKAKMQPTHPIRLGVASHFSVFY 448
+I+ A++ PTHPIRLG+A +FSVFY
Sbjct: 163 QDIALAELPPTHPIRLGLALNFSVFY 188
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 182 bits (442), Expect = 2e-46
Identities = 90/151 (59%), Positives = 108/151 (71%), Gaps = 2/151 (1%)
Frame = +2
Query: 2 ARGGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMA--KEYRVKVE 175
A GG EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK E A + YR K+E
Sbjct: 15 ASGGEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIE 74
Query: 176 KELREICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGESRHSVVEDSQK 355
EL IC +L LLD HL+P A ESKVFYLKMKGDY+RYLAE +G+ R E +
Sbjct: 75 AELARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMN 134
Query: 356 AYQDAFEISKAKMQPTHPIRLGVASHFSVFY 448
AY+ A +I+ A + PTHPIRLG+A +FSVFY
Sbjct: 135 AYKAAQDIALADLAPTHPIRLGLALNFSVFY 165
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 179 bits (436), Expect = 8e-46
Identities = 88/146 (60%), Positives = 109/146 (74%), Gaps = 2/146 (1%)
Frame = +2
Query: 17 ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEW--SERKQQMAKEYRVKVEKELRE 190
EL+ EERNLLSVAYKNV+GARR+SWR++SSIEQK E +E + KEYR K+E EL +
Sbjct: 37 ELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSK 96
Query: 191 ICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGESRHSVVEDSQKAYQDA 370
IC +L LLD HL+P ++ ESKVFYLKMKGDY+RYLAE TG R E + AY+ A
Sbjct: 97 ICDGILKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAA 156
Query: 371 FEISKAKMQPTHPIRLGVASHFSVFY 448
+I+ A + PTHPIRLG+A +FSVFY
Sbjct: 157 QDIALADLAPTHPIRLGLALNFSVFY 182
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 174 bits (424), Expect = 2e-44
Identities = 87/146 (59%), Positives = 109/146 (74%), Gaps = 2/146 (1%)
Frame = +2
Query: 17 ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMA--KEYRVKVEKELRE 190
EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK E + +A KEYR ++E EL +
Sbjct: 42 ELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSK 101
Query: 191 ICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGESRHSVVEDSQKAYQDA 370
IC +L LLD HL+P A+ ESKVFYLKMKGDY+RYLAE +G R E++ AY+ A
Sbjct: 102 ICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSA 161
Query: 371 FEISKAKMQPTHPIRLGVASHFSVFY 448
+I+ A + THPIRLG+A +FSVFY
Sbjct: 162 QDIALADLPTTHPIRLGLALNFSVFY 187
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 173 bits (420), Expect = 7e-44
Identities = 86/151 (56%), Positives = 109/151 (72%), Gaps = 2/151 (1%)
Frame = +2
Query: 2 ARGGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEW--SERKQQMAKEYRVKVE 175
A GG EL+ EERNLLSVAYKNV+GARR+SWR++SSIEQK E + A+ YR +VE
Sbjct: 42 AGGGGELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGAAGHAAAARSYRARVE 101
Query: 176 KELREICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGESRHSVVEDSQK 355
EL IC +L LLD+ L+P A+ ++KVFYLKMKGDY+RYLAE TG R + +
Sbjct: 102 AELSNICAGILRLLDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLA 161
Query: 356 AYQDAFEISKAKMQPTHPIRLGVASHFSVFY 448
AYQ A +I+ ++ PTHPIRLG+A +FSVFY
Sbjct: 162 AYQAAQDIAMKELSPTHPIRLGLALNFSVFY 192
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 120 bits (289), Expect = 5e-28
Identities = 56/121 (46%), Positives = 80/121 (66%)
Frame = +2
Query: 2 ARGGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVEKE 181
AR V++S EER L SV +K +GARR+SWR++ S+EQK ++ Y+ KVE E
Sbjct: 31 ARMDVDMSAEERLLFSVGFKKTIGARRASWRILESLEQKVTAGDQPGVTINGYKKKVEDE 90
Query: 182 LREICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGESRHSVVEDSQKAY 361
LR +C +VL ++ H +P A++ E+ VF+ KMKGDYYRYLAE +TG + + + S AY
Sbjct: 91 LRAVCNEVLSIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAY 150
Query: 362 Q 364
Q
Sbjct: 151 Q 151
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 87.0 bits (206), Expect = 6e-18
Identities = 52/117 (44%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
Frame = +2
Query: 20 LSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEWSERKQQMAKEYRVKVEKELREI 193
L+ EERNLLSV YKN++GA+R++ R+I SIE ++T+ E + EYR KVE E+ +I
Sbjct: 15 LTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQTAEYRRKVEAEMDKI 74
Query: 194 CYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGESRHSVVEDSQKAYQ 364
C DV+ ++DK KGDYYRYLAE TG + V E S AY+
Sbjct: 75 CCDVINIIDK------------------KGDYYRYLAEFKTGTEKIEVSELSLNAYE 113
>07_03_1647 +
28370226-28370369,28370452-28370611,28370704-28370831,
28372512-28372628,28372729-28372782,28372985-28373075,
28373517-28373688,28374452-28374573,28374726-28374817,
28375331-28375373,28375596-28375656,28376367-28376515,
28376659-28376729,28376805-28376975,28377056-28377124,
28377427-28377528,28377629-28377697,28378060-28378138,
28378238-28378337,28378438-28378513,28378715-28378894,
28379430-28379552,28379634-28379717,28380068-28380252,
28380339-28380477,28380585-28380644,28380926-28381030,
28381332-28381445
Length = 1019
Score = 30.3 bits (65), Expect = 0.75
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = +2
Query: 26 NEERNLLSVAYKNVVGARRSSW-RVISSIEQKTEWSERKQQMAKEYRVKVEKELREICYD 202
N + LLS AY N+ W + ISS+ Q+ S ++ Y+ + K L +
Sbjct: 291 NTKNALLSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAG--SEIYQESLVKALTKHFGA 348
Query: 203 VLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEV-ATG 319
L ++D L+ + +SK KGD RY+ V +TG
Sbjct: 349 KLLIIDPSLLASGQSSKSKESESYKKGDRVRYIGSVQSTG 388
>12_02_0977 + 24999211-25000275,25000375-25000521,25000805-25001179
Length = 528
Score = 28.7 bits (61), Expect = 2.3
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 209 CLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGESR-HSV----VEDSQKAYQDAF 373
C+L+ +I + +PES++ L + +A VA +R S+ ++ A DA
Sbjct: 252 CVLEPGMIERVLHPESEIRELAIHSAMGGTIAVVAAAATRLRSLRMFNIQVGTVAVDDAV 311
Query: 374 EISKAKMQPTHPIRLGV 424
E+ M+ T P R+ +
Sbjct: 312 ELRNLHMRDTRPSRIAI 328
>10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097
Length = 214
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 135 LSDHSVFCSIEEMTRHDDRRAPTTFL*ATERR 40
L+D S CSI ++TR D + A T TER+
Sbjct: 154 LADKSTGCSIRKITRSDKKPAKTRSFVETERK 185
>05_01_0599 + 5368091-5368123,5368212-5368383,5369237-5369335,
5369636-5369748,5369824-5369916,5370081-5370244,
5370328-5370564,5370739-5370883,5370982-5371160,
5371997-5372142,5372239-5372366,5372441-5372614,
5372706-5372735,5373219-5373380,5373460-5373705,
5373733-5373870,5373974-5374174,5374304-5374448,
5374575-5374681,5374830-5374970,5375274-5375539,
5375621-5375745,5375843-5376109,5376250-5376263
Length = 1174
Score = 28.3 bits (60), Expect = 3.0
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +2
Query: 221 KHLIPK----ASNPESKVFYLKMKGDYYRYLAEVATGESRHSVVEDSQKAYQD 367
KHLI A N +F+ +K Y RY+A V+ GE++ +++ S QD
Sbjct: 927 KHLITSLRKNADNNMGALFFEALKRGYERYMAHVSDGENQ-TLIGKSYSECQD 978
>07_03_0021 -
12521013-12521116,12521476-12521533,12522418-12522525,
12522609-12522702,12522875-12523035,12523095-12523169,
12523431-12523490,12523589-12523648,12523935-12523982,
12524065-12524113,12524368-12524432,12524522-12524605,
12524710-12524729,12524777-12524801,12524993-12525052,
12525130-12525211,12525344-12525447,12525662-12525723,
12525840-12525996
Length = 491
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +2
Query: 284 DYYRYLAEVATGESRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGVASHF 436
D R L +A G SR E+ +K ++ ++ PT + + SHF
Sbjct: 49 DRLRVLKGIADGLSRGKRPEEMEKLVKELWKAHMRHQDPTETLNKDIISHF 99
>01_06_0406 +
29113033-29113119,29113250-29113309,29114104-29114186,
29114394-29114556,29114695-29114824,29115016-29115174,
29115295-29115464,29115590-29115670,29116492-29116536,
29116597-29117346,29117424-29117654
Length = 652
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 310 GHRRKQTFCCRGFTESIPGCF*DQQGKNAAHTPNKAGCG 426
G RRK+ E +PG ++ K A HT AG G
Sbjct: 584 GGRRKKKSIKEKIKEKLPGSHKQEEQKQAGHTAPAAGTG 622
>08_02_0721 +
20401217-20401360,20401689-20401809,20401969-20402067,
20402790-20402851,20403680-20403797,20404004-20404343,
20404435-20404582,20405043-20405144,20405240-20405359,
20405812-20405895,20405974-20406101,20408314-20408389,
20408556-20408631,20408800-20408876,20408975-20409031,
20409411-20409555,20409634-20409806,20409928-20410054,
20410090-20410192,20410492-20410688,20410946-20411097
Length = 882
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 50 VAYKNVVGARRSSWRVISSIEQKTEW 127
VAYKNV+ A ++ S+ +KTEW
Sbjct: 625 VAYKNVLKAHKAIILKAESMAEKTEW 650
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = +2
Query: 179 ELREICYDVLCLLDKHLIPKASNPES-----KVFYLKMKG 283
+LRE+ YD+ LD+ L+ A+ P S K+ K+KG
Sbjct: 71 DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110
>08_02_0812 -
21444112-21444273,21444374-21444488,21445369-21445487,
21446589-21446757,21447082-21447233,21447349-21447492,
21447575-21447687,21448265-21448316,21448408-21448494
Length = 370
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/64 (17%), Positives = 30/64 (46%)
Frame = +2
Query: 122 EWSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYL 301
EW+ + Q+ + + +C+D+ + H+ P+ + + Y +K ++ +Y+
Sbjct: 260 EWNAAQAQLNGTVHCDYPRWIEILCHDINVHVPHHISPRIPSYNLRAAYDSIKQNWGKYI 319
Query: 302 AEVA 313
E +
Sbjct: 320 NEAS 323
>05_05_0127 -
22580720-22580808,22580936-22580987,22581703-22581908,
22582019-22582152,22582239-22582369,22583333-22583392,
22583615-22583755,22583880-22584347,22584524-22584686,
22585373-22585476,22585755-22585853,22586177-22586281,
22586516-22586596,22587168-22587986,22588497-22588553
Length = 902
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +3
Query: 36 ETFFPLLIKMWSAPDGHHGESFPLLNRKPNGRKENNRWQ 152
E PL+ + + P+ S P L+ N R++ +RW+
Sbjct: 406 EPLLPLVQNVATIPETSANNSSPSLSTSTNRRRQKSRWE 444
>02_05_1241 -
35189111-35189389,35189604-35189711,35189982-35190713,
35190811-35191230,35191484-35191565,35191719-35192002,
35193104-35193256
Length = 685
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 149 AKEYRVKVEKELREICYDVLC-LLDKHLIPKASN 247
AK +K + +R I D LC DKHL+PK +N
Sbjct: 352 AKNRYIKYIRNIRAI-QDYLCNRADKHLVPKINN 384
>02_05_0483 -
29391929-29392256,29393048-29393148,29393640-29393834,
29394124-29394240,29394376-29394447,29394840-29394950,
29395029-29395127,29395991-29396047,29396607-29397008,
29397249-29397303,29397725-29397809,29398023-29398130,
29398229-29398295,29398717-29398875,29399277-29399405
Length = 694
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 32 ERNLLSVAYKNVVGARRSSWRVISSIEQK--TEWSERKQQMAKE 157
ER L+V + A +S W+ ISS + K T++ ERK + K+
Sbjct: 404 EREYLAVMKRTEYEAIKSQWKSISSTQAKRFTKFRERKGLIDKD 447
>12_01_0915 -
8908643-8908756,8909086-8909203,8909570-8909682,
8911138-8911218,8911307-8911357,8912173-8912232,
8913353-8913419,8913509-8913759
Length = 284
Score = 26.6 bits (56), Expect = 9.2
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +2
Query: 161 RVKVEKELREICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGESRHSVV 340
RVK + + EI L KH K +PES+ ++K+ Y E G+ +++
Sbjct: 63 RVKQDANVSEIKKAYYKLSLKHHPDKNPDPESRKLFVKIANAYEILKDESTRGQYDYAIA 122
Query: 341 EDSQKAYQDA 370
+ Y A
Sbjct: 123 HPEEVFYNTA 132
>03_02_0445 - 8551912-8552047,8552729-8552896,8553785-8554068,
8554143-8555386,8556901-8556967,8557059-8557150,
8557269-8557480,8558541-8558623,8559092-8559122,
8559770-8559951,8560557-8560616,8561092-8561289,
8561485-8561539,8562740-8562855,8563012-8563176,
8563310-8563483,8564134-8564333,8564778-8564882,
8565063-8565126,8566452-8566718
Length = 1300
Score = 26.6 bits (56), Expect = 9.2
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +2
Query: 8 GGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVEKELR 187
GG S +LLS N + A R+ +S+ + ++ + QM + + +E E+
Sbjct: 941 GGTSASISSDDLLSSLVSNGLSALRNESTYTASVVALEDTNKVENQMTDKPQKCMEDEVG 1000
Query: 188 EICYDVLCLLDKH 226
E C + L D++
Sbjct: 1001 ETCEAYVELADRN 1013
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,223,935
Number of Sequences: 37544
Number of extensions: 264323
Number of successful extensions: 763
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -