Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_F11
(449 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 247 3e-66
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 247 3e-66
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 232 8e-62
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 231 2e-61
Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical pr... 50 8e-07
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 32 0.22
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 32 0.22
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 32 0.22
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 32 0.22
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 30 0.89
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 28 3.6
AF016683-8|AAM97998.1| 480|Caenorhabditis elegans Hypothetical ... 28 3.6
Z78062-5|CAB01500.1| 516|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z77136-2|CAB00884.3| 670|Caenorhabditis elegans Hypothetical pr... 27 4.8
U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical pr... 27 4.8
AL021571-7|CAA16515.1| 516|Caenorhabditis elegans Hypothetical ... 27 4.8
Z81552-3|CAB04486.1| 470|Caenorhabditis elegans Hypothetical pr... 27 6.3
AL110477-1|CAB54325.1| 331|Caenorhabditis elegans Hypothetical ... 27 6.3
AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical... 27 6.3
AF022980-4|AAG24191.1| 335|Caenorhabditis elegans Serpentine re... 27 6.3
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr... 27 8.3
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 247 bits (604), Expect = 3e-66
Identities = 120/146 (82%), Positives = 133/146 (91%)
Frame = +2
Query: 11 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVEKELRE 190
G ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE SE+KQQMAKEYR KVEKELR+
Sbjct: 35 GAELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMAKEYREKVEKELRD 94
Query: 191 ICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGESRHSVVEDSQKAYQDA 370
IC DVL LLDK LIPKA ESKVFYLKMKGDYYRYLAEVA+G+ R+SVVE SQ++YQ+A
Sbjct: 95 ICQDVLNLLDKFLIPKAGAAESKVFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEA 154
Query: 371 FEISKAKMQPTHPIRLGVASHFSVFY 448
F+I+K KMQPTHPIRLG+A +FSVF+
Sbjct: 155 FDIAKDKMQPTHPIRLGLALNFSVFF 180
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 247 bits (604), Expect = 3e-66
Identities = 120/146 (82%), Positives = 133/146 (91%)
Frame = +2
Query: 11 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVEKELRE 190
G ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE SE+KQQMAKEYR KVEKELR+
Sbjct: 35 GAELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMAKEYREKVEKELRD 94
Query: 191 ICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGESRHSVVEDSQKAYQDA 370
IC DVL LLDK LIPKA ESKVFYLKMKGDYYRYLAEVA+G+ R+SVVE SQ++YQ+A
Sbjct: 95 ICQDVLNLLDKFLIPKAGAAESKVFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEA 154
Query: 371 FEISKAKMQPTHPIRLGVASHFSVFY 448
F+I+K KMQPTHPIRLG+A +FSVF+
Sbjct: 155 FDIAKDKMQPTHPIRLGLALNFSVFF 180
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 232 bits (568), Expect = 8e-62
Identities = 117/146 (80%), Positives = 129/146 (88%)
Frame = +2
Query: 11 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVEKELRE 190
G ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE SE+KQQ+AKEYRVKVE+EL +
Sbjct: 35 GQELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLAKEYRVKVEQELND 94
Query: 191 ICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGESRHSVVEDSQKAYQDA 370
IC DVL LLD+ LI KA ESKVFYLKMKGDYYRYLAEVA+ E R +VVE SQKAYQ+A
Sbjct: 95 ICQDVLKLLDEFLIVKAGAAESKVFYLKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEA 153
Query: 371 FEISKAKMQPTHPIRLGVASHFSVFY 448
+I+K KMQPTHPIRLG+A +FSVFY
Sbjct: 154 LDIAKDKMQPTHPIRLGLALNFSVFY 179
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 231 bits (564), Expect = 2e-61
Identities = 116/146 (79%), Positives = 128/146 (87%)
Frame = +2
Query: 11 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVEKELRE 190
G ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE SE+KQQ+AKEYRVKVE+EL +
Sbjct: 35 GQELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLAKEYRVKVEQELND 94
Query: 191 ICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGESRHSVVEDSQKAYQDA 370
IC DVL LLD+ LI KA ESK FYLKMKGDYYRYLAEVA+ E R +VVE SQKAYQ+A
Sbjct: 95 ICQDVLKLLDEFLIVKAGAAESKAFYLKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEA 153
Query: 371 FEISKAKMQPTHPIRLGVASHFSVFY 448
+I+K KMQPTHPIRLG+A +FSVFY
Sbjct: 154 LDIAKDKMQPTHPIRLGLALNFSVFY 179
>Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical
protein M117.3 protein.
Length = 125
Score = 50.0 bits (114), Expect = 8e-07
Identities = 26/55 (47%), Positives = 35/55 (63%)
Frame = +2
Query: 275 MKGDYYRYLAEVATGESRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGVASHFS 439
M D++RYL + +R S+ AYQ+A I+K KMQPTHPIRLG+A + S
Sbjct: 1 MVADHFRYLVQY-DDINREEHAHKSRIAYQEALGIAKDKMQPTHPIRLGLALNAS 54
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 31.9 bits (69), Expect = 0.22
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 200 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVATGES 325
D+ L++H K PE Y K+KG Y++Y+A+++T +S
Sbjct: 1214 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLSTYKS 1256
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 31.9 bits (69), Expect = 0.22
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 200 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVATGES 325
D+ L++H K PE Y K+KG Y++Y+A+++T +S
Sbjct: 1553 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLSTYKS 1595
>Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical protein
ZK524.2c protein.
Length = 1475
Score = 31.9 bits (69), Expect = 0.22
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 200 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVATGES 325
D+ L++H K PE Y K+KG Y++Y+A+++T +S
Sbjct: 873 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLSTYKS 915
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 31.9 bits (69), Expect = 0.22
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 200 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVATGES 325
D+ L++H K PE Y K+KG Y++Y+A+++T +S
Sbjct: 1211 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLSTYKS 1253
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 31.9 bits (69), Expect = 0.22
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 200 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVATGES 325
D+ L++H K PE Y K+KG Y++Y+A+++T +S
Sbjct: 1214 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLSTYKS 1256
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 31.9 bits (69), Expect = 0.22
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 200 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVATGES 325
D+ L++H K PE Y K+KG Y++Y+A+++T +S
Sbjct: 1553 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLSTYKS 1595
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 31.9 bits (69), Expect = 0.22
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 200 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVATGES 325
D+ L++H K PE Y K+KG Y++Y+A+++T +S
Sbjct: 1211 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLSTYKS 1253
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 31.9 bits (69), Expect = 0.22
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 200 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVATGES 325
D+ L++H K PE Y K+KG Y++Y+A+++T +S
Sbjct: 1214 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLSTYKS 1256
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 31.9 bits (69), Expect = 0.22
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 200 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVATGES 325
D+ L++H K PE Y K+KG Y++Y+A+++T +S
Sbjct: 1553 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLSTYKS 1595
>Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical protein
ZK524.2c protein.
Length = 1475
Score = 31.9 bits (69), Expect = 0.22
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 200 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVATGES 325
D+ L++H K PE Y K+KG Y++Y+A+++T +S
Sbjct: 873 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLSTYKS 915
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 31.9 bits (69), Expect = 0.22
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 200 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVATGES 325
D+ L++H K PE Y K+KG Y++Y+A+++T +S
Sbjct: 1211 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLSTYKS 1253
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 31.9 bits (69), Expect = 0.22
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 200 DVLCLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVATGES 325
D+ L++H K PE Y K+KG Y++Y+A+++T +S
Sbjct: 1214 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLSTYKS 1256
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 29.9 bits (64), Expect = 0.89
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +2
Query: 92 RVISSIEQKTEWSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKAS---NPESKV 262
R ++E W ER K+ +KEL+ IC D+L + + S NP S
Sbjct: 568 RAKDAVEDTLRWMERNTLADKDEIEAKDKELKSICQDILTKMHQQEAQSGSGCGNPGSGG 627
Query: 263 FY 268
F+
Sbjct: 628 FH 629
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +2
Query: 53 AYKNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVEKELREI 193
A K+ + A++ R+ ++K E ERK++ +E + + E+E+REI
Sbjct: 984 AEKDRIEAKKFEERMKKE-QEKQEEKERKEREKREEKERKEREIREI 1029
>AF016683-8|AAM97998.1| 480|Caenorhabditis elegans Hypothetical
protein K09F6.10 protein.
Length = 480
Score = 27.9 bits (59), Expect = 3.6
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 5 RGGVELSNEERNLLSVAYKNVVGARRSSWR--VISSIEQKTEWSERKQQMAKEYR 163
+G VE+S + L Y NVVG + VI + ++ ++ K Q AK++R
Sbjct: 178 KGSVEISKDRLMLFGSKYPNVVGFTHCLLKAIVIGKLWYDSKSTKTKGQEAKDFR 232
>Z78062-5|CAB01500.1| 516|Caenorhabditis elegans Hypothetical
protein F16D3.7 protein.
Length = 516
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -3
Query: 405 CVGCIFALLISKASWYAFCESSTTECLLS 319
C GC+ + I ASW +C S + S
Sbjct: 367 CSGCVPPIAIDVASWLGYCNSMLNPIIYS 395
>Z77136-2|CAB00884.3| 670|Caenorhabditis elegans Hypothetical
protein ZC376.2 protein.
Length = 670
Score = 27.5 bits (58), Expect = 4.8
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +2
Query: 107 IEQKTEWSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESKVFY 268
I Q+ S ++K+ VK EL + V CL D+H PK SN E + Y
Sbjct: 233 IHQQIIMSASMSNLSKKSNVK---ELTVVARIVGCLPDEHGFPKLSNVEVEKAY 283
>U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical protein
F20D12.2 protein.
Length = 1116
Score = 27.5 bits (58), Expect = 4.8
Identities = 20/97 (20%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +2
Query: 110 EQKTEWSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESKVFYLKMKGDY 289
E+K + E+++ +AKE +KVEKE+ E + ++D + + E K+ + ++ G +
Sbjct: 757 EKKLKRIEQEKNIAKELVLKVEKEISENA--LRMIIDDEIRRERRERERKMAH-EIVGKF 813
Query: 290 YRYLAEVATGESRHSVVE--DSQKAYQDAFEISKAKM 394
+R + + + +E + ++ + EI + ++
Sbjct: 814 WRVVLKSVDNHVKSICIEMVNEKETISEGLEIFRERV 850
>AL021571-7|CAA16515.1| 516|Caenorhabditis elegans Hypothetical
protein F16D3.7 protein.
Length = 516
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -3
Query: 405 CVGCIFALLISKASWYAFCESSTTECLLS 319
C GC+ + I ASW +C S + S
Sbjct: 367 CSGCVPPIAIDVASWLGYCNSMLNPIIYS 395
>Z81552-3|CAB04486.1| 470|Caenorhabditis elegans Hypothetical
protein F56G4.4 protein.
Length = 470
Score = 27.1 bits (57), Expect = 6.3
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 59 KNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVEKELRE 190
+N V + ++ ++ E+K +W ER++Q E R + E+ RE
Sbjct: 274 QNYVDKPNNKFKKLTKEEKKAQWEERRRQKDTE-RAEDEERRRE 316
>AL110477-1|CAB54325.1| 331|Caenorhabditis elegans Hypothetical
protein Y113G7B.2 protein.
Length = 331
Score = 27.1 bits (57), Expect = 6.3
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -3
Query: 132 SDHSVFCSIEEMTRHDDRRAPTTFL*ATERRFLSSLLSSTPPR 4
S H F +I + H R T L + RRF S + SSTP R
Sbjct: 283 SSHGFFSTIAMIALHAPYRNYTRKLLPSCRRFNSVVFSSTPQR 325
>AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical
protein Y62H9A.13 protein.
Length = 348
Score = 27.1 bits (57), Expect = 6.3
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 14 VELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVE 175
VELSN+ N + Y V + ++ +S E+KT +E + + EY VK E
Sbjct: 100 VELSNDVSNENPIVYYQKVASSTTNPVYNNSSEEKTHSAENQDNI--EYGVKTE 151
>AF022980-4|AAG24191.1| 335|Caenorhabditis elegans Serpentine
receptor, class j protein50 protein.
Length = 335
Score = 27.1 bits (57), Expect = 6.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 184 ELLFYFNPIFFCHLLFSFRPF 122
++++YF P FC L F PF
Sbjct: 4 DIIYYFTPRVFCALTFLVNPF 24
>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical
protein K07G5.3 protein.
Length = 1202
Score = 26.6 bits (56), Expect = 8.3
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +2
Query: 17 ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVEKE 181
EL E+R AY++ + +RR S +++ +K +R+Q+ ++Y V +E
Sbjct: 606 ELREEDRAQKRFAYRSAIDSRRISALQFANLARK-RVMDRRQRKERKYEEIVREE 659
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,315,993
Number of Sequences: 27780
Number of extensions: 235448
Number of successful extensions: 783
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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