Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_F11
         (449 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    26   0.22 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    26   0.22 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   1.2  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   1.2  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   1.5  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    23   2.0  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    23   2.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.0  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   2.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   3.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   3.6  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   3.6  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   4.7  
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    21   4.7  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    21   4.7  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    21   4.7  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    21   4.7  
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    21   4.7  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    21   4.7  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    21   4.7  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    21   4.7  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   8.2  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 25.8 bits (54), Expect = 0.22
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = -3

Query: 405 CVGCIFALLISKASWYAFCESSTTECLLSPVATSARY 295
           C  CI   + S   W  +C S+   C+ +  +   R+
Sbjct: 35  CRNCIHPTVFSVLFWLGYCNSAINPCIYALFSKDFRF 71


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 25.8 bits (54), Expect = 0.22
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = -3

Query: 405 CVGCIFALLISKASWYAFCESSTTECLLSPVATSARY 295
           C  CI   + S   W  +C S+   C+ +  +   R+
Sbjct: 483 CRNCIHPTVFSVLFWLGYCNSAINPCIYALFSKDFRF 519


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 17/97 (17%), Positives = 45/97 (46%)
 Frame = +2

Query: 8   GGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVEKELR 187
           G +E++      +  A   ++  R +   +  + E++T  +E+  +M K Y   ++KE +
Sbjct: 409 GSMEINQNIAQNIDHAKNTIIDYRNNDLSI--NEEKRTIENEQLNRMYKSYPNYIDKETK 466

Query: 188 EICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRY 298
           ++  ++      + +  A   ++   + K K D++ Y
Sbjct: 467 DMNLEISTRPKSNTVENACVLKNTEIF-KDKSDWFDY 502


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +2

Query: 89  WRVISSIEQKTEWSERKQ--QMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESKV 262
           W V ++I++K  WS  ++  Q   +  +  +K L  + +D   ++   L+P      S V
Sbjct: 156 WVVYNNIKRKRSWSRPREPAQTTSKAGIHRKKVLLSVWWDYKGIVYFELLPPNRTINSVV 215

Query: 263 F 265
           +
Sbjct: 216 Y 216


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 449 NRRRRNVTPHPALLGVWA 396
           NR RR ++    +LG+WA
Sbjct: 23  NRPRRKLSKKQQMLGIWA 40


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +2

Query: 107 IEQKTE-WSE--RKQQMAKEYRVKVEKELREICYDV 205
           +E K E W     K    K+YRVK E+E +++  +V
Sbjct: 95  VENKPELWDSLANKYDPDKKYRVKFEEEAKKLGINV 130


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +2

Query: 107 IEQKTE-WSE--RKQQMAKEYRVKVEKELREICYDV 205
           +E K E W     K    K+YRVK E+E +++  +V
Sbjct: 95  VENKPELWDSLANKYDPDKKYRVKFEEEAKKLGINV 130


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 75  PDGHHGESFPLL 110
           P GHH  S PLL
Sbjct: 516 PSGHHASSAPLL 527


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 353 SVNPLQQNVCFLLWPLLRDTCS 288
           +V+PLQ    FL  P L D CS
Sbjct: 10  NVSPLQCTSPFLGGPQLTDVCS 31


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 290 YRYLAEVATGESRHSVVEDS 349
           Y+Y+ E+   ESR S   DS
Sbjct: 321 YKYIREIMNKESRISAAIDS 340


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 290 YRYLAEVATGESRHSVVEDS 349
           Y+Y+ E+   ESR S   DS
Sbjct: 321 YKYIREIMNKESRISAAIDS 340


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 362 QDAFEISKAKMQPTHPIRLGVASHFS 439
           +DA  + KA++ P   ++  +ASH S
Sbjct: 263 EDANLLLKARLNPNSSLQPSLASHHS 288


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +2

Query: 89  WRVISSIEQKTEWSERKQ--QMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESKV 262
           W V ++I++K  WS  ++  Q   +  +  +K L  + +D   ++   L+P      S V
Sbjct: 35  WVVYNNIKRKRSWSRPRESAQTTSKAGIHRKKVLLLVWWDHKGIVYFELLPPNRTINSVV 94

Query: 263 F 265
           +
Sbjct: 95  Y 95


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/48 (18%), Positives = 23/48 (47%)
 Frame = +2

Query: 35  RNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVEK 178
           + ++ V  KN +    ++W  +  ++   +W+E +    K+ R+   K
Sbjct: 21  QQIIDVDEKNQI-LTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNK 67


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/48 (18%), Positives = 23/48 (47%)
 Frame = +2

Query: 35  RNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVEK 178
           + ++ V  KN +    ++W  +  ++   +W+E +    K+ R+   K
Sbjct: 21  QQIIDVDEKNQI-LTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNK 67


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/48 (18%), Positives = 23/48 (47%)
 Frame = +2

Query: 35  RNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVEK 178
           + ++ V  KN +    ++W  +  ++   +W+E +    K+ R+   K
Sbjct: 21  QQIIDVDEKNQI-LTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNK 67


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/48 (18%), Positives = 23/48 (47%)
 Frame = +2

Query: 35  RNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVEK 178
           + ++ V  KN +    ++W  +  ++   +W+E +    K+ R+   K
Sbjct: 21  QQIIDVDEKNQI-LTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNK 67


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/48 (18%), Positives = 23/48 (47%)
 Frame = +2

Query: 35  RNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVEK 178
           + ++ V  KN +    ++W  +  ++   +W+E +    K+ R+   K
Sbjct: 21  QQIIDVDEKNQI-LTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNK 67


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/48 (18%), Positives = 23/48 (47%)
 Frame = +2

Query: 35  RNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVEK 178
           + ++ V  KN +    ++W  +  ++   +W+E +    K+ R+   K
Sbjct: 21  QQIIDVDEKNQI-LTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNK 67


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/48 (18%), Positives = 23/48 (47%)
 Frame = +2

Query: 35  RNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVEK 178
           + ++ V  KN +    ++W  +  ++   +W+E +    K+ R+   K
Sbjct: 89  QQIIDVDEKNQI-LTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNK 135


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/48 (18%), Positives = 23/48 (47%)
 Frame = +2

Query: 35  RNLLSVAYKNVVGARRSSWRVISSIEQKTEWSERKQQMAKEYRVKVEK 178
           + ++ V  KN +    ++W  +  ++   +W+E +    K+ R+   K
Sbjct: 89  QQIIDVDEKNQI-LTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNK 135


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = +1

Query: 325 QTFCCRGF 348
           +TFCC+G+
Sbjct: 455 KTFCCKGY 462


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,405
Number of Sequences: 438
Number of extensions: 2706
Number of successful extensions: 26
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)