Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_F10
(494 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon gu... 58 5e-09
U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon gu... 58 5e-09
U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon gu... 52 3e-07
U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon gu... 52 3e-07
AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFO... 52 3e-07
AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFOR... 52 3e-07
Z98853-1|CAB57901.1| 262|Caenorhabditis elegans Hypothetical pr... 29 1.4
U97194-2|AAN84846.1| 806|Caenorhabditis elegans Prion-like-(q/n... 29 1.9
Z74038-1|CAA98497.2| 578|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical p... 28 4.3
Z81101-7|CAB03200.1| 613|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z70752-6|CAA94759.1| 613|Caenorhabditis elegans Hypothetical pr... 27 7.5
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 27 7.5
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 27 9.9
>U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform a protein.
Length = 1144
Score = 57.6 bits (133), Expect = 5e-09
Identities = 38/93 (40%), Positives = 51/93 (54%)
Frame = +2
Query: 188 RNRGGKYDVHDRELAHGRRDYPDGGFHEYAHPLDNKSRHSMSSGPKPGNESETDSMAEYG 367
R RG Y V RE GR P G +Y D+ + S++ G K ESETDSMA+YG
Sbjct: 1054 RQRGQNYPVSQREREQGRE--PILGKPDYK--TDDDEKRSLT-GSKA--ESETDSMAQYG 1106
Query: 368 EGETAGMTEDGSFIGQYGRKRRPPASTQPDSAS 466
+ + TEDGSFIGQY ++ + +P+ S
Sbjct: 1107 DTDPGVFTEDGSFIGQYVPQKSLMPAERPEKGS 1139
>U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform b protein.
Length = 1328
Score = 57.6 bits (133), Expect = 5e-09
Identities = 38/93 (40%), Positives = 51/93 (54%)
Frame = +2
Query: 188 RNRGGKYDVHDRELAHGRRDYPDGGFHEYAHPLDNKSRHSMSSGPKPGNESETDSMAEYG 367
R RG Y V RE GR P G +Y D+ + S++ G K ESETDSMA+YG
Sbjct: 1238 RQRGQNYPVSQREREQGRE--PILGKPDYK--TDDDEKRSLT-GSKA--ESETDSMAQYG 1290
Query: 368 EGETAGMTEDGSFIGQYGRKRRPPASTQPDSAS 466
+ + TEDGSFIGQY ++ + +P+ S
Sbjct: 1291 DTDPGVFTEDGSFIGQYVPQKSLMPAERPEKGS 1323
>U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform d protein.
Length = 1147
Score = 51.6 bits (118), Expect = 3e-07
Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Frame = +2
Query: 188 RNRGGKYDVHDRELAHGRRDYPDGGFHEYAHPLDNKSRHSMSSGPKPGNESETDSMAEYG 367
R RG Y V RE GR P G +Y D+ + S++ G K ESETDSMA+YG
Sbjct: 1054 RQRGQNYPVSQREREQGRE--PILGKPDYK--TDDDEKRSLT-GSKA--ESETDSMAQYG 1106
Query: 368 EGETAGMTEDGSFI---GQYGRKRRPPASTQPDSAS 466
+ + TEDGSFI GQY ++ + +P+ S
Sbjct: 1107 DTDPGVFTEDGSFIAVSGQYVPQKSLMPAERPEKGS 1142
>U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform c protein.
Length = 1331
Score = 51.6 bits (118), Expect = 3e-07
Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Frame = +2
Query: 188 RNRGGKYDVHDRELAHGRRDYPDGGFHEYAHPLDNKSRHSMSSGPKPGNESETDSMAEYG 367
R RG Y V RE GR P G +Y D+ + S++ G K ESETDSMA+YG
Sbjct: 1238 RQRGQNYPVSQREREQGRE--PILGKPDYK--TDDDEKRSLT-GSKA--ESETDSMAQYG 1290
Query: 368 EGETAGMTEDGSFI---GQYGRKRRPPASTQPDSAS 466
+ + TEDGSFI GQY ++ + +P+ S
Sbjct: 1291 DTDPGVFTEDGSFIAVSGQYVPQKSLMPAERPEKGS 1326
>AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFORM
protein.
Length = 1147
Score = 51.6 bits (118), Expect = 3e-07
Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Frame = +2
Query: 188 RNRGGKYDVHDRELAHGRRDYPDGGFHEYAHPLDNKSRHSMSSGPKPGNESETDSMAEYG 367
R RG Y V RE GR P G +Y D+ + S++ G K ESETDSMA+YG
Sbjct: 1054 RQRGQNYPVSQREREQGRE--PILGKPDYK--TDDDEKRSLT-GSKA--ESETDSMAQYG 1106
Query: 368 EGETAGMTEDGSFI---GQYGRKRRPPASTQPDSAS 466
+ + TEDGSFI GQY ++ + +P+ S
Sbjct: 1107 DTDPGVFTEDGSFIAVSGQYVPQKSLMPAERPEKGS 1142
>AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFORM
protein.
Length = 1331
Score = 51.6 bits (118), Expect = 3e-07
Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Frame = +2
Query: 188 RNRGGKYDVHDRELAHGRRDYPDGGFHEYAHPLDNKSRHSMSSGPKPGNESETDSMAEYG 367
R RG Y V RE GR P G +Y D+ + S++ G K ESETDSMA+YG
Sbjct: 1238 RQRGQNYPVSQREREQGRE--PILGKPDYK--TDDDEKRSLT-GSKA--ESETDSMAQYG 1290
Query: 368 EGETAGMTEDGSFI---GQYGRKRRPPASTQPDSAS 466
+ + TEDGSFI GQY ++ + +P+ S
Sbjct: 1291 DTDPGVFTEDGSFIAVSGQYVPQKSLMPAERPEKGS 1326
>Z98853-1|CAB57901.1| 262|Caenorhabditis elegans Hypothetical
protein R08A2.1 protein.
Length = 262
Score = 29.5 bits (63), Expect = 1.4
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Frame = +2
Query: 200 GKYDVHDRELAHGRRDYPDGGFHEYAHPLDNKSRHSMS-SGPKPGNESETDSMAEYGEGE 376
GK + E R D D G + K + S +GPKP + T + + +
Sbjct: 29 GKSSKSNSEAEDERDDEDDSGNDKKKKKKGKKGKSDSSQTGPKPPKNTNTLAATQDPNYQ 88
Query: 377 T-AGMTEDGSFIGQYGRKRRPPASTQPDS 460
T AG+ D F G G + PP + P S
Sbjct: 89 TLAGLNNDAVF-GPGGGEGGPPRAPAPGS 116
>U97194-2|AAN84846.1| 806|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform b protein.
Length = 806
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 287 DNKSRHSMSSGPKPGNESETDSMAEYGEGETAG-MTEDGSFIGQYGRKRR 433
+NK + + SSG + G + + S + G G G + +DG Q G++++
Sbjct: 347 NNKKKTASSSGNEEGKDGRSSSASSNGRGARGGSVLKDGKGDKQKGKRKK 396
>Z74038-1|CAA98497.2| 578|Caenorhabditis elegans Hypothetical
protein F58B4.1a protein.
Length = 578
Score = 28.3 bits (60), Expect = 3.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 345 VSLSFPGFGPLLIECLDLLSNGCAYSW 265
VS ++ F P++ C DL N AY+W
Sbjct: 518 VSATYTTFAPIVNSCQDLHPNCAAYAW 544
>Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical
protein Y41E3.11 protein.
Length = 917
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 185 RRNRGGKYDVHDR-ELAHGRRDYPDGGFHEYAHP 283
RR GG + H+R + G +Y GG+H+Y P
Sbjct: 609 RRGGGGYNNHHNRGDRGGGGGNYHHGGYHQYNRP 642
>Z81101-7|CAB03200.1| 613|Caenorhabditis elegans Hypothetical
protein F25B3.6 protein.
Length = 613
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = +2
Query: 281 PLDNKSRHSMSSGPKPGNESETDSMAEYGEGETAGMTEDGSFIGQYGRKRRPPASTQPD 457
P + S +GPKPG TDS A + E + RKRR S+ D
Sbjct: 18 PATSDSDSDSDAGPKPGKPLSTDSSASDSDAEKP-QAKPAKKKTLTKRKRRATGSSDDD 75
>Z70752-6|CAA94759.1| 613|Caenorhabditis elegans Hypothetical
protein F25B3.6 protein.
Length = 613
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = +2
Query: 281 PLDNKSRHSMSSGPKPGNESETDSMAEYGEGETAGMTEDGSFIGQYGRKRRPPASTQPD 457
P + S +GPKPG TDS A + E + RKRR S+ D
Sbjct: 18 PATSDSDSDSDAGPKPGKPLSTDSSASDSDAEKP-QAKPAKKKTLTKRKRRATGSSDDD 75
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 368 EGETAGMTEDGSFIGQYGRKRRPPASTQPDSASQAFAT 481
E A M ED + ++GR R PP T P+ A + T
Sbjct: 58 EAVMATMDEDDDGLNEFGRPRNPP-RTPPEPAPEGQPT 94
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/59 (27%), Positives = 21/59 (35%)
Frame = +2
Query: 188 RNRGGKYDVHDRELAHGRRDYPDGGFHEYAHPLDNKSRHSMSSGPKPGNESETDSMAEY 364
RNRG +YD + LA R + A P+ ES S +EY
Sbjct: 1613 RNRGSRYDETEHLLAQDNRSPSSPRYRSMARASPPSPAERYGHPPRYRTESPPSSRSEY 1671
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,728,215
Number of Sequences: 27780
Number of extensions: 97551
Number of successful extensions: 362
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 362
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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