Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_F05
         (431 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein prot...    24   2.7  
AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.    23   3.5  

>AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein
           protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 164 SKFRIYVTASSTQCKARYGEYSQI 93
           SK ++Y  A    C  ++G Y QI
Sbjct: 68  SKLKVYPAAVLEVCTCKFGAYPQI 91


>AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.
          Length = 145

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 213 IRRYMSSVMDLEIHYFEQISNLCHG-QQHSMQ 121
           +++ ++ V DLE  ++   S  CH   Q+SM+
Sbjct: 86  LKQMVARVTDLEASFYASFSYNCHDHDQYSME 117


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,656
Number of Sequences: 2352
Number of extensions: 9054
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)