Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_F03
         (476 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   4.1  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   7.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   9.6  
AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    22   9.6  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    22   9.6  

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +2

Query: 269 TASVLGRKLYQLLHAAISGSRQTLQYI 349
           +AS+LGRK+     A  + +++TL+Y+
Sbjct: 742 SASILGRKVSNPCQADWTEAKRTLRYL 768


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -1

Query: 257 PRSLNSFPVALFGKLPLTLETSYVTRPAMLTSKKKLAQNH 138
           P  LN F   L GK+P+T    +  R A + +  +L +N+
Sbjct: 753 PEILNVFEPYLEGKIPVT----HFQRLAFIVALDRLVENY 788


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 16  YWRHFYRLVLKS 51
           YW + Y+LVL+S
Sbjct: 387 YWENLYQLVLRS 398


>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
 Frame = +1

Query: 295 LSTSARGYLWLETNA--PIYYTQ 357
           LS    GY+W  TN+   + YTQ
Sbjct: 361 LSIDQNGYVWFMTNSIIKLLYTQ 383


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 7/31 (22%), Positives = 14/31 (45%)
 Frame = -2

Query: 409 CKMHPWRVASKVYRCQRSVCNILERLSRARD 317
           C +  W + S   +C    CNI + +   ++
Sbjct: 542 CIIGKWGIISTAQKCCNKPCNIFQAVLSVKE 572


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 493,549
Number of Sequences: 2352
Number of extensions: 9903
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 42095889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)