Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_F02
(477 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035727-1|AAH35727.1| 337|Homo sapiens Lix1 homolog (mouse)-li... 31 2.7
BC021201-1|AAH21201.1| 331|Homo sapiens junctional sarcoplasmic... 31 2.7
AK056978-1|BAB71330.1| 331|Homo sapiens protein ( Homo sapiens ... 31 2.7
S69209-1|AAB30273.1| 251|Homo sapiens troponin T slow isoform p... 29 8.3
S69208-1|AAB30272.1| 262|Homo sapiens troponin T protein. 29 8.3
M19309-1|AAA61204.1| 278|Homo sapiens TNNT1 protein. 29 8.3
M19308-1|AAA61205.1| 251|Homo sapiens TNNT1 protein. 29 8.3
BT019630-1|AAV38436.1| 251|Homo sapiens troponin T1, skeletal, ... 29 8.3
BC107798-1|AAI07799.1| 192|Homo sapiens TNNT1 protein protein. 29 8.3
BC034143-1|AAH34143.1| 262|Homo sapiens TNNT1 protein protein. 29 8.3
BC022086-1|AAH22086.2| 297|Homo sapiens TNNT1 protein protein. 29 8.3
BC010963-1|AAH10963.1| 262|Homo sapiens TNNT1 protein protein. 29 8.3
AY762904-1|AAX07832.1| 168|Homo sapiens nemaline myopathy mutan... 29 8.3
AY762903-1|AAX07831.1| 179|Homo sapiens nemaline myopathy mutan... 29 8.3
AK096229-1|BAC04732.1| 454|Homo sapiens protein ( Homo sapiens ... 29 8.3
AJ011712-3|CAA09752.1| 278|Homo sapiens slow skeletal muscle tr... 29 8.3
AJ011712-2|CAA09751.1| 262|Homo sapiens slow skeletal muscle tr... 29 8.3
AJ011712-1|CAA09750.1| 251|Homo sapiens slow skeletal muscle tr... 29 8.3
>BC035727-1|AAH35727.1| 337|Homo sapiens Lix1 homolog (mouse)-like
protein.
Length = 337
Score = 30.7 bits (66), Expect = 2.7
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -2
Query: 422 KREAPGILTKTHGTIYRLRGGETGLNK*LPVTPVAGPKIGPLP 294
+R PG+ T GT+ LR G TG TP AGP P P
Sbjct: 7 QRLQPGVGTSGRGTLRALRPGVTGAAA-ATATPPAGPPPAPPP 48
>BC021201-1|AAH21201.1| 331|Homo sapiens junctional sarcoplasmic
reticulum protein 1 protein.
Length = 331
Score = 30.7 bits (66), Expect = 2.7
Identities = 22/60 (36%), Positives = 28/60 (46%)
Frame = +3
Query: 51 RERPTQGRVSNG*EAKEKKRHKVAGERERKRKEGVNREGAP*S*LLVKRHESREEREAPW 230
+ERP + G KEK R + ++ER RKE R L +R ESRE PW
Sbjct: 236 KERPRR----EGKPRKEKPRKEERPKKERPRKEERPRAAREPREALPQRWESREGGHRPW 291
>AK056978-1|BAB71330.1| 331|Homo sapiens protein ( Homo sapiens
cDNA FLJ32416 fis, clone SKMUS2000774, weakly similar to
BALBIANI RING PROTEIN 1. ).
Length = 331
Score = 30.7 bits (66), Expect = 2.7
Identities = 22/60 (36%), Positives = 28/60 (46%)
Frame = +3
Query: 51 RERPTQGRVSNG*EAKEKKRHKVAGERERKRKEGVNREGAP*S*LLVKRHESREEREAPW 230
+ERP + G KEK R + ++ER RKE R L +R ESRE PW
Sbjct: 236 KERPRR----EGKPRKEKPRKEERPKKERPRKEERPRAAREPREALPQRWESREGGHRPW 291
>S69209-1|AAB30273.1| 251|Homo sapiens troponin T slow isoform
protein.
Length = 251
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 6 RDRHRRVFSASPHIRRERPTQGRVSNG*EAKEKKRHKVAGERERKRKEGVNREGAP*S*L 185
R R R +ER Q +++ KE++ K E + K+K+ ++ GA
Sbjct: 94 RRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGY 153
Query: 186 LVKRHESREERE 221
LVK + R +R+
Sbjct: 154 LVKAEQKRGKRQ 165
>S69208-1|AAB30272.1| 262|Homo sapiens troponin T protein.
Length = 262
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 6 RDRHRRVFSASPHIRRERPTQGRVSNG*EAKEKKRHKVAGERERKRKEGVNREGAP*S*L 185
R R R +ER Q +++ KE++ K E + K+K+ ++ GA
Sbjct: 105 RRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGY 164
Query: 186 LVKRHESREERE 221
LVK + R +R+
Sbjct: 165 LVKAEQKRGKRQ 176
>M19309-1|AAA61204.1| 278|Homo sapiens TNNT1 protein.
Length = 278
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 6 RDRHRRVFSASPHIRRERPTQGRVSNG*EAKEKKRHKVAGERERKRKEGVNREGAP*S*L 185
R R R +ER Q +++ KE++ K E + K+K+ ++ GA
Sbjct: 105 RRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGY 164
Query: 186 LVKRHESREERE 221
LVK + R +R+
Sbjct: 165 LVKAEQKRGKRQ 176
>M19308-1|AAA61205.1| 251|Homo sapiens TNNT1 protein.
Length = 251
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 6 RDRHRRVFSASPHIRRERPTQGRVSNG*EAKEKKRHKVAGERERKRKEGVNREGAP*S*L 185
R R R +ER Q +++ KE++ K E + K+K+ ++ GA
Sbjct: 94 RRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGY 153
Query: 186 LVKRHESREERE 221
LVK + R +R+
Sbjct: 154 LVKAEQKRGKRQ 165
>BT019630-1|AAV38436.1| 251|Homo sapiens troponin T1, skeletal,
slow protein.
Length = 251
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 6 RDRHRRVFSASPHIRRERPTQGRVSNG*EAKEKKRHKVAGERERKRKEGVNREGAP*S*L 185
R R R +ER Q +++ KE++ K E + K+K+ ++ GA
Sbjct: 94 RRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGY 153
Query: 186 LVKRHESREERE 221
LVK + R +R+
Sbjct: 154 LVKAEQKRGKRQ 165
>BC107798-1|AAI07799.1| 192|Homo sapiens TNNT1 protein protein.
Length = 192
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 6 RDRHRRVFSASPHIRRERPTQGRVSNG*EAKEKKRHKVAGERERKRKEGVNREGAP*S*L 185
R R R +ER Q +++ KE++ K E + K+K+ ++ GA
Sbjct: 35 RRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGY 94
Query: 186 LVKRHESREERE 221
LVK + R +R+
Sbjct: 95 LVKAEQKRGKRQ 106
>BC034143-1|AAH34143.1| 262|Homo sapiens TNNT1 protein protein.
Length = 262
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 6 RDRHRRVFSASPHIRRERPTQGRVSNG*EAKEKKRHKVAGERERKRKEGVNREGAP*S*L 185
R R R +ER Q +++ KE++ K E + K+K+ ++ GA
Sbjct: 105 RRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGY 164
Query: 186 LVKRHESREERE 221
LVK + R +R+
Sbjct: 165 LVKAEQKRGKRQ 176
>BC022086-1|AAH22086.2| 297|Homo sapiens TNNT1 protein protein.
Length = 297
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 6 RDRHRRVFSASPHIRRERPTQGRVSNG*EAKEKKRHKVAGERERKRKEGVNREGAP*S*L 185
R R R +ER Q +++ KE++ K E + K+K+ ++ GA
Sbjct: 140 RRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGY 199
Query: 186 LVKRHESREERE 221
LVK + R +R+
Sbjct: 200 LVKAEQKRGKRQ 211
>BC010963-1|AAH10963.1| 262|Homo sapiens TNNT1 protein protein.
Length = 262
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 6 RDRHRRVFSASPHIRRERPTQGRVSNG*EAKEKKRHKVAGERERKRKEGVNREGAP*S*L 185
R R R +ER Q +++ KE++ K E + K+K+ ++ GA
Sbjct: 105 RRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGY 164
Query: 186 LVKRHESREERE 221
LVK + R +R+
Sbjct: 165 LVKAEQKRGKRQ 176
>AY762904-1|AAX07832.1| 168|Homo sapiens nemaline myopathy mutant
slow skeletal muscle troponin T low molecular weight v
protein.
Length = 168
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 6 RDRHRRVFSASPHIRRERPTQGRVSNG*EAKEKKRHKVAGERERKRKEGVNREGAP*S*L 185
R R R +ER Q +++ KE++ K E + K+K+ ++ GA
Sbjct: 94 RRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGY 153
Query: 186 LVKRHESREERE 221
LVK + R +R+
Sbjct: 154 LVKAEQKRGKRQ 165
>AY762903-1|AAX07831.1| 179|Homo sapiens nemaline myopathy mutant
slow skeletal muscle troponin T high molecular weight
protein.
Length = 179
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 6 RDRHRRVFSASPHIRRERPTQGRVSNG*EAKEKKRHKVAGERERKRKEGVNREGAP*S*L 185
R R R +ER Q +++ KE++ K E + K+K+ ++ GA
Sbjct: 105 RRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGY 164
Query: 186 LVKRHESREERE 221
LVK + R +R+
Sbjct: 165 LVKAEQKRGKRQ 176
>AK096229-1|BAC04732.1| 454|Homo sapiens protein ( Homo sapiens
cDNA FLJ38910 fis, clone NT2NE2006813, weakly similar to
CELL SURFACE GLYCOPROTEIN 1 PRECURSOR. ).
Length = 454
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 302 PLPVSSLRRKSKQVPAAPSFSPVKPRSLPLLSG 204
P P S + VP+ PS P P +PLLSG
Sbjct: 257 PSPPSDVPSLLSDVPSPPSDVPSPPSDIPLLSG 289
>AJ011712-3|CAA09752.1| 278|Homo sapiens slow skeletal muscle
troponin T protein.
Length = 278
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 6 RDRHRRVFSASPHIRRERPTQGRVSNG*EAKEKKRHKVAGERERKRKEGVNREGAP*S*L 185
R R R +ER Q +++ KE++ K E + K+K+ ++ GA
Sbjct: 105 RRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGY 164
Query: 186 LVKRHESREERE 221
LVK + R +R+
Sbjct: 165 LVKAEQKRGKRQ 176
>AJ011712-2|CAA09751.1| 262|Homo sapiens slow skeletal muscle
troponin T protein.
Length = 262
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 6 RDRHRRVFSASPHIRRERPTQGRVSNG*EAKEKKRHKVAGERERKRKEGVNREGAP*S*L 185
R R R +ER Q +++ KE++ K E + K+K+ ++ GA
Sbjct: 105 RRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGY 164
Query: 186 LVKRHESREERE 221
LVK + R +R+
Sbjct: 165 LVKAEQKRGKRQ 176
>AJ011712-1|CAA09750.1| 251|Homo sapiens slow skeletal muscle
troponin T protein.
Length = 251
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 6 RDRHRRVFSASPHIRRERPTQGRVSNG*EAKEKKRHKVAGERERKRKEGVNREGAP*S*L 185
R R R +ER Q +++ KE++ K E + K+K+ ++ GA
Sbjct: 94 RRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGY 153
Query: 186 LVKRHESREERE 221
LVK + R +R+
Sbjct: 154 LVKAEQKRGKRQ 165
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,298,482
Number of Sequences: 237096
Number of extensions: 1800214
Number of successful extensions: 5287
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5259
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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