Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_F01
         (513 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S77415-1|AAB33341.1|  332|Homo sapiens melanocortin-4 receptor p...    29   9.5  
L08603-1|AAA35791.1|  332|Homo sapiens melanocortin 4 receptor p...    29   9.5  
EF080883-1|ABK35300.1|  332|Homo sapiens melanocortin 4 receptor...    29   9.5  
EF080881-1|ABK35298.1|  332|Homo sapiens melanocortin 4 receptor...    29   9.5  
EF080880-1|ABK35297.1|  332|Homo sapiens melanocortin 4 receptor...    29   9.5  
BC111992-1|AAI11993.1|  332|Homo sapiens melanocortin 4 receptor...    29   9.5  
BC101802-1|AAI01803.1|  332|Homo sapiens melanocortin 4 receptor...    29   9.5  
BC069172-1|AAH69172.1|  332|Homo sapiens melanocortin 4 receptor...    29   9.5  
AY236539-1|AAO92061.1|  332|Homo sapiens melanocortin 4 receptor...    29   9.5  

>S77415-1|AAB33341.1|  332|Homo sapiens melanocortin-4 receptor
           protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 318 LFYLTCPQIIYFQCFKLDYNQHLL 389
           +FY++CPQ  Y  CF   +N +L+
Sbjct: 266 IFYISCPQNPYCVCFMSHFNLYLI 289


>L08603-1|AAA35791.1|  332|Homo sapiens melanocortin 4 receptor
           protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 318 LFYLTCPQIIYFQCFKLDYNQHLL 389
           +FY++CPQ  Y  CF   +N +L+
Sbjct: 266 IFYISCPQNPYCVCFMSHFNLYLI 289


>EF080883-1|ABK35300.1|  332|Homo sapiens melanocortin 4 receptor
           variant protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 318 LFYLTCPQIIYFQCFKLDYNQHLL 389
           +FY++CPQ  Y  CF   +N +L+
Sbjct: 266 IFYISCPQNPYCVCFMSHFNLYLI 289


>EF080881-1|ABK35298.1|  332|Homo sapiens melanocortin 4 receptor
           variant protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 318 LFYLTCPQIIYFQCFKLDYNQHLL 389
           +FY++CPQ  Y  CF   +N +L+
Sbjct: 266 IFYISCPQNPYCVCFMSHFNLYLI 289


>EF080880-1|ABK35297.1|  332|Homo sapiens melanocortin 4 receptor
           variant protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 318 LFYLTCPQIIYFQCFKLDYNQHLL 389
           +FY++CPQ  Y  CF   +N +L+
Sbjct: 266 IFYISCPQNPYCVCFMSHFNLYLI 289


>BC111992-1|AAI11993.1|  332|Homo sapiens melanocortin 4 receptor
           protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 318 LFYLTCPQIIYFQCFKLDYNQHLL 389
           +FY++CPQ  Y  CF   +N +L+
Sbjct: 266 IFYISCPQNPYCVCFMSHFNLYLI 289


>BC101802-1|AAI01803.1|  332|Homo sapiens melanocortin 4 receptor
           protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 318 LFYLTCPQIIYFQCFKLDYNQHLL 389
           +FY++CPQ  Y  CF   +N +L+
Sbjct: 266 IFYISCPQNPYCVCFMSHFNLYLI 289


>BC069172-1|AAH69172.1|  332|Homo sapiens melanocortin 4 receptor
           protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 318 LFYLTCPQIIYFQCFKLDYNQHLL 389
           +FY++CPQ  Y  CF   +N +L+
Sbjct: 266 IFYISCPQNPYCVCFMSHFNLYLI 289


>AY236539-1|AAO92061.1|  332|Homo sapiens melanocortin 4 receptor
           protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 318 LFYLTCPQIIYFQCFKLDYNQHLL 389
           +FY++CPQ  Y  CF   +N +L+
Sbjct: 266 IFYISCPQNPYCVCFMSHFNLYLI 289


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,713,510
Number of Sequences: 237096
Number of extensions: 1369540
Number of successful extensions: 1634
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1634
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)