Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_E24
(465 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851... 50 7e-07
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410... 44 8e-05
12_02_0498 + 19721038-19721178,19721376-19721472,19721576-197216... 34 1e-04
10_08_0547 - 18682357-18682683,18682971-18683060,18683279-186833... 32 5e-04
04_04_0611 - 26594737-26594991,26595307-26595396,26595490-265955... 30 0.003
02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591... 31 0.46
09_03_0096 + 12328116-12329561,12329810-12329852,12332119-123322... 31 0.60
08_02_1406 - 26854845-26855606 30 1.1
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 29 1.4
03_02_0476 + 8768182-8768313,8768734-8768833,8768949-8768986,876... 29 1.4
06_02_0066 - 11081446-11081544,11081639-11081846,11083122-110832... 29 1.8
05_01_0567 - 4967373-4967675,4968023-4968083,4968217-4968284,496... 29 1.8
01_05_0710 + 24492337-24493053 29 1.8
12_02_1146 + 26458426-26458680 28 3.2
03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884... 28 4.3
02_02_0472 - 10725234-10726119,10726201-10726808 28 4.3
11_01_0665 - 5413561-5413593,5413785-5413907,5414020-5414259,541... 27 5.6
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 27 5.6
02_05_0029 - 25194827-25195095,25195129-25197970 27 5.6
12_01_0908 - 8823782-8826124 27 9.8
09_04_0143 + 15056435-15056732,15056808-15057417,15057839-15057917 27 9.8
01_05_0529 + 22982859-22983041,22983146-22983597,22983598-22983892 27 9.8
>12_02_0992 +
25083397-25083537,25084198-25084228,25084971-25085139,
25085228-25085291,25085408-25085474,25086543-25086586,
25086835-25086922,25087079-25087238,25087659-25087779,
25087859-25087942,25088043-25088162,25088689-25088901,
25088995-25089054,25089144-25089262,25089407-25089465,
25089585-25089919
Length = 624
Score = 50.4 bits (115), Expect = 7e-07
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +2
Query: 230 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKII---TQGGVTYKN 400
WH +CF C C PI F E + Y CY+D F +C C I G + Y+
Sbjct: 277 WHPQCFRCFACNKPISEYEFAMHEDQPYHKSCYKDFFHPKCDVCKNFIPTNRNGLIEYRA 336
Query: 401 EPWHRECFTCP 433
P+ + + CP
Sbjct: 337 HPFWMQKY-CP 346
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 251 CVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQ-GGVTYKNEPWHRECF 424
C CKNPIG F+ ++ C+ RC CNK I++ ++++P+H+ C+
Sbjct: 257 CAGCKNPIGHGRFLSCMDSVWHPQCF------RCFACNKPISEYEFAMHEDQPYHKSCY 309
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +2
Query: 350 CVKCNKIITQGG-VTYKNEPWHRECFTCPHCNTSLA 454
C C I G ++ + WH +CF C CN ++
Sbjct: 257 CAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPIS 292
>06_01_0579 +
4099039-4099086,4099798-4099848,4100151-4100286,
4100287-4100401,4100496-4100528,4101037-4101166,
4101663-4101751,4102042-4102148,4102238-4102309,
4102384-4102764,4104907-4105064,4105581-4105674,
4106082-4106089,4106297-4106387,4107136-4107289,
4108257-4108377,4108468-4108551,4108946-4109065,
4109181-4109393,4109482-4109544,4109668-4109783,
4110132-4110190,4111126-4111445
Length = 920
Score = 43.6 bits (98), Expect = 8e-05
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +2
Query: 230 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKII---TQGGVTYKN 400
WH +CF C C PI F Y CY+++F +C C + I G + Y+
Sbjct: 578 WHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERFHPKCDVCKQFIPTNMNGLIEYRA 637
Query: 401 EPWHRECFTCP 433
P+ + + CP
Sbjct: 638 HPFWLQKY-CP 647
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +2
Query: 350 CVKCNKIITQGG-VTYKNEPWHRECFTCPHCN 442
C C+ I G ++ WH ECF C CN
Sbjct: 558 CAGCHSEIGHGRFLSCMGAVWHPECFRCHACN 589
>12_02_0498 +
19721038-19721178,19721376-19721472,19721576-19721619,
19722120-19722203,19722441-19722662
Length = 195
Score = 34.3 bits (75), Expect = 0.049
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 344 TRCVKCNKII-TQGGVTYKNEPWHRECFTCPHCNTSL 451
T+C+ C+K + +T N +H+ CF C HC +L
Sbjct: 10 TKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTL 46
Score = 31.5 bits (68), Expect(2) = 1e-04
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 347 RCVKCNKIITQ-GGVTYKNEPWHRECFTCPH 436
+CV CNK + VT N +H+ CF C H
Sbjct: 109 KCVGCNKTVYPIERVTVNNTMYHKSCFKCCH 139
Score = 31.1 bits (67), Expect(2) = 1e-04
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 185 KTIAGTKKMEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKF 340
KT+ K+ R +H+ CF C CK + ++ E +YC ++ F
Sbjct: 17 KTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLF 68
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +2
Query: 107 PNSTADRENK-KFCCAL---RDRCQLGDPRKTIAGTKKMEYKTRQWHEKCFCCVVCKNPI 274
P T + EN K A R++C +G KT+ +++ +H+ CF C I
Sbjct: 87 PEKTVENENAIKVSSAFAGTREKC-VGC-NKTVYPIERVTVNNTMYHKSCFKCCHGGCTI 144
Query: 275 GTKSFIPREQEIYC 316
++I E ++YC
Sbjct: 145 SPSNYIAHEGKLYC 158
>10_08_0547 -
18682357-18682683,18682971-18683060,18683279-18683301,
18683397-18683496,18683615-18683749
Length = 224
Score = 31.9 bits (69), Expect(2) = 5e-04
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +2
Query: 155 RDRCQLGDPRKTIAGTKKMEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYED 334
+D+C D KT+ + + +H+ CF C CK + S+ + +YC +E
Sbjct: 7 QDKCNACD--KTVHFIDLLTADSIPYHKSCFRCSHCKGTLSMCSYSSMDGVLYCKTHFEQ 64
Query: 335 KF 340
F
Sbjct: 65 LF 66
Score = 30.7 bits (66), Expect = 0.60
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 347 RCVKCNKIITQGGV-TYKNEPWHRECFTCPHCNTSLA 454
+C C+K + + T + P+H+ CF C HC +L+
Sbjct: 9 KCNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTLS 45
Score = 28.3 bits (60), Expect(2) = 5e-04
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 347 RCVKCNKIITQ-GGVTYKNEPWHRECFTCPH 436
+C C K + +T + E +HR CF C H
Sbjct: 103 KCTACKKTVYPLEKMTMEGECYHRTCFKCAH 133
Score = 26.6 bits (56), Expect = 9.8
Identities = 14/57 (24%), Positives = 24/57 (42%)
Frame = +2
Query: 146 CALRDRCQLGDPRKTIAGTKKMEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYC 316
C +D+C +KT+ +KM + +H CF C + S+ +YC
Sbjct: 98 CGTQDKCTAC--KKTVYPLEKMTMEGECYHRTCFKCAHGGCLLTNASYASHNGILYC 152
>04_04_0611 -
26594737-26594991,26595307-26595396,26595490-26595515,
26595603-26595702,26595820-26595954
Length = 201
Score = 30.3 bits (65), Expect = 0.80
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 347 RCVKCNKIITQGGV-TYKNEPWHRECFTCPHCNTSLA 454
+C C+K + + T P+H+ CF C HC L+
Sbjct: 9 KCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILS 45
Score = 29.1 bits (62), Expect(2) = 0.003
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +2
Query: 155 RDRCQLGDPRKTIAGTKKMEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYED 334
+D+C D KT+ + +H+ CF C CK + S+ + +YC +E
Sbjct: 7 QDKCTACD--KTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQ 64
Query: 335 KF 340
F
Sbjct: 65 LF 66
Score = 28.3 bits (60), Expect(2) = 0.003
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 347 RCVKCNKIITQ-GGVTYKNEPWHRECFTCPH 436
+C C K + +T + E +H+ CF C H
Sbjct: 104 KCAACQKTVYPLEKLTLEGESYHKSCFKCSH 134
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 125 RENKKFCCAL---RDRCQLGDPRKTIAGTKKMEYKTRQWHEKCFCCVVCKNPIGTKSFIP 295
R K C A +D+C +KT+ +K+ + +H+ CF C + T S+
Sbjct: 89 RAPSKICSAFSGTQDKCAAC--QKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAA 146
Query: 296 REQEIYC 316
+YC
Sbjct: 147 LNGVLYC 153
>02_05_0094 -
25758213-25758479,25758886-25758975,25759090-25759118,
25759208-25759307,25759411-25759545
Length = 206
Score = 31.1 bits (67), Expect = 0.46
Identities = 19/77 (24%), Positives = 34/77 (44%)
Frame = +2
Query: 155 RDRCQLGDPRKTIAGTKKMEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYED 334
+D+C+ D KT+ + +H+ CF C CK + ++ + +YC +E
Sbjct: 7 QDKCKACD--KTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSSMDGVLYCKTHFEQ 64
Query: 335 KFATRCVKCNKIITQGG 385
F +K +QGG
Sbjct: 65 LF-KETGSFSKKFSQGG 80
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Frame = +2
Query: 347 RCVKCNK------IITQGGVTYKNEPWHRECFTCPHCNTSLA 454
+C C+K ++T GV+Y H+ CF C HC +L+
Sbjct: 9 KCKACDKTVHFIDLLTADGVSY-----HKTCFKCSHCKGTLS 45
Score = 28.3 bits (60), Expect = 3.2
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 347 RCVKCNKIITQ-GGVTYKNEPWHRECFTCPH 436
+C C K + +T + E +H+ CF C H
Sbjct: 105 KCAACQKTVYPLEKLTLEGESYHKSCFKCSH 135
>09_03_0096 +
12328116-12329561,12329810-12329852,12332119-12332237,
12333326-12333853
Length = 711
Score = 30.7 bits (66), Expect = 0.60
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +2
Query: 251 CVVCKNPIGTKSFIPREQEIYCAGC---YEDKFATRCVKCN 364
CV+CK + ++ C GC +E+K RC CN
Sbjct: 656 CVICKREEACVILLQCAHQVLCVGCNKRHEEKGVARCPCCN 696
>08_02_1406 - 26854845-26855606
Length = 253
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 347 RCVKCNKIITQGGVTYKN--EPWHRECFTCPHCNTSLA 454
RCV+CN + GG + W +C TCP LA
Sbjct: 154 RCVECNAVAGGGGGGGRQVVRAWSYQCQTCPDSELCLA 191
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +2
Query: 185 KTIAGTKKMEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYE 331
+T+ +++ R +H CF C CK + ++ E +YC Y+
Sbjct: 18 RTVYPVEELAADGRVYHRPCFRCTHCKATLQFSNYSSVEGVLYCKPHYD 66
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +2
Query: 347 RCVKCNKIITQ-GGVTYKNEPWHRECFTCPHCNTSLA 454
+CV CNK + V +H+ CF C H +L+
Sbjct: 111 KCVVCNKTVYPLEKVNLNGSSYHKSCFRCTHGGCTLS 147
Score = 27.5 bits (58), Expect = 5.6
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 407 WHRECFTCPHCNTSL 451
+HR CF C HC +L
Sbjct: 33 YHRPCFRCTHCKATL 47
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/65 (20%), Positives = 29/65 (44%)
Frame = +2
Query: 155 RDRCQLGDPRKTIAGTKKMEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYED 334
+D+C + + KT+ +K+ +H+ CF C + + + E ++YC +
Sbjct: 109 QDKCVVCN--KTVYPLEKVNLNGSSYHKSCFRCTHGGCTLSPSNNVTHEGKLYCKTHHSQ 166
Query: 335 KFATR 349
F +
Sbjct: 167 LFMVK 171
>03_02_0476 +
8768182-8768313,8768734-8768833,8768949-8768986,
8769102-8769191,8769465-8769695
Length = 196
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 347 RCVKCNKII-TQGGVTYKNEPWHRECFTCPHCNTSLA 454
+C C K + ++ +HR CF C HC ++L+
Sbjct: 8 KCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLS 44
Score = 27.1 bits (57), Expect = 7.4
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 347 RCVKCNKIITQ-GGVTYKNEPWHRECFTCPH 436
+C C+K VT + + +H+ CF C H
Sbjct: 107 KCATCSKTAYPLEKVTVEGQAYHKSCFKCSH 137
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +2
Query: 230 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKF 340
+H CF C CK+ + ++ E YC +E F
Sbjct: 29 FHRSCFKCQHCKSTLSLGNYSSIEGVPYCKPHFEQLF 65
>06_02_0066 -
11081446-11081544,11081639-11081846,11083122-11083257,
11083339-11083541,11083616-11083765,11083848-11083964,
11084623-11085119
Length = 469
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +2
Query: 107 PNSTADRENKKFCCALRDRCQLGDPRKTIAGTKKMEYKTRQWHEKCFCCVVCKNPI 274
P++TAD N + R ++ +K + G + R W E+ C C+ PI
Sbjct: 246 PDATADELNASDATCIICREEMTTAKKLLCGHLFHVHCLRSWLERQHTCPTCRAPI 301
>05_01_0567 -
4967373-4967675,4968023-4968083,4968217-4968284,
4968390-4968425,4968553-4968726,4968983-4969023,
4969138-4969187,4969300-4969388,4969490-4969564,
4969684-4969772,4971320-4971434
Length = 366
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -2
Query: 260 IRRNRNISRATASSCTPSSWFLQSFSSGHRADIYPLKHN 144
+R++ N+ T +S S++F Q F S RAD L+H+
Sbjct: 52 VRQHMNVLNKTPASFYISNFFRQFFRSVRRADYCALRHS 90
>01_05_0710 + 24492337-24493053
Length = 238
Score = 29.1 bits (62), Expect = 1.8
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 56 RRARENNEDVAILSMFLPNSTADRENKKFCCALRDRCQLGDPRKTIAGTKKM 211
RRARE V L P+S ++ F A+ C+L DPR +A ++M
Sbjct: 133 RRAREAASVVRWLCR--PDSPQRPDSATFAVAVAGLCRLEDPRNALAALREM 182
>12_02_1146 + 26458426-26458680
Length = 84
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 401 EPWHRECFTCPHCNTSLAGQ 460
+PW R TCP C TSLA Q
Sbjct: 61 DPWLRLNPTCPVCRTSLADQ 80
>03_02_0490 -
8840577-8840914,8841009-8841067,8841168-8841283,
8841578-8841640,8841826-8842038,8842211-8842330,
8842453-8842578,8842593-8842749,8842830-8842962,
8843054-8843138,8843305-8843421
Length = 508
Score = 27.9 bits (59), Expect = 4.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 230 WHEKCFCCVVCKNPI 274
WH +CF C C++PI
Sbjct: 134 WHPQCFRCSSCRHPI 148
>02_02_0472 - 10725234-10726119,10726201-10726808
Length = 497
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 38 VGQDRIRRARENNEDVAILSM-FLPNSTADRENKKFCCALRDRCQLGD 178
V ++++ RA+ E + +L FLP + E KF C L + C G+
Sbjct: 137 VSRNKLARAQTEREILGLLDHPFLPTLYSHFETDKFYCLLMEFCSGGN 184
>11_01_0665 -
5413561-5413593,5413785-5413907,5414020-5414259,
5414564-5415184
Length = 338
Score = 27.5 bits (58), Expect = 5.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 269 PIGTKSFIPREQEIYCAGCYEDKFATR 349
P+GT ++IPR+ + Y D+F R
Sbjct: 70 PVGTPTYIPRDMFVEYLDSYTDQFGIR 96
>03_05_0383 +
23656041-23656096,23657189-23657255,23657599-23657745,
23658094-23658178,23658380-23658551,23660056-23660176,
23660431-23660550,23660861-23661073,23661154-23661213,
23661306-23661424,23661609-23661667,23661798-23662132
Length = 517
Score = 27.5 bits (58), Expect = 5.6
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 230 WHEKCFCCVVCKNPI 274
WH +CF C C PI
Sbjct: 198 WHPQCFRCFACDRPI 212
Score = 27.1 bits (57), Expect = 7.4
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 350 CVKCNKIITQGG-VTYKNEPWHRECFTCPHCNTSLA 454
C C I QG ++ + WH +CF C C+ ++
Sbjct: 178 CAGCKTPIGQGRFLSCMDSVWHPQCFRCFACDRPIS 213
>02_05_0029 - 25194827-25195095,25195129-25197970
Length = 1036
Score = 27.5 bits (58), Expect = 5.6
Identities = 15/50 (30%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = -3
Query: 445 GVAVGASEALAVPRLVLVRHT-ALSDYLVTLNAASGKLVFIAPGAVDLLF 299
G+A+GA+ L+V +++++ + DY+V A + + + +AP ++ LLF
Sbjct: 695 GIALGAAFVLSVAVVLVLKSSFRRQDYIVKAVADTTEALELAPASLVLLF 744
>12_01_0908 - 8823782-8826124
Length = 780
Score = 26.6 bits (56), Expect = 9.8
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 285 ALSRANRRSTAPGAMKTSLPLA 350
AL RA+ S GA+ TSLPLA
Sbjct: 31 ALRRAHAASLVSGALATSLPLA 52
>09_04_0143 + 15056435-15056732,15056808-15057417,15057839-15057917
Length = 328
Score = 26.6 bits (56), Expect = 9.8
Identities = 9/37 (24%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 221 TRQWHEKCFCCVVCKNPI-GTKSFIPRE-QEIYCAGC 325
TR+W ++ F C++C + + ++ F+ +C C
Sbjct: 108 TRRWRKRGFTCIICMDKVQASEEFLVNVCSHAFCKSC 144
>01_05_0529 + 22982859-22983041,22983146-22983597,22983598-22983892
Length = 309
Score = 26.6 bits (56), Expect = 9.8
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +2
Query: 386 VTYKNEPWHRECFTCPHCNTSLAGQR 463
+ K+ PW +E TC C + G R
Sbjct: 194 IASKHHPWRKESLTCCSCRYVIDGYR 219
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,345,794
Number of Sequences: 37544
Number of extensions: 245156
Number of successful extensions: 794
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 931320312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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