Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_E19
         (573 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    36   4e-04
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    32   0.005
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   0.53 
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              21   6.6  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   8.7  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   8.7  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 35.5 bits (78), Expect = 4e-04
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = +1

Query: 25  FMPFSIGKRTCIGQTLVTTMSFTMFANIVQEFDVAAENADDLVQIPACVALPK-DTYNLY 201
           F+PFS G R+C+G+         + + I++ F V ++  +   ++ A + L + D + + 
Sbjct: 478 FVPFSAGPRSCVGRKYAMLKLKIVLSTILRNFRVRSDVKESEFRLQADIILKRADGFKIR 537

Query: 202 LIPRK 216
           L PRK
Sbjct: 538 LEPRK 542


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 31.9 bits (69), Expect = 0.005
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +1

Query: 31  PFSIGKRTCIGQTLVTTMSFTMFANIVQEFDVAAENADDL 150
           PF  G+R C G+  V      + A I++EF++  E   DL
Sbjct: 458 PFGAGRRICPGKRFVDLALQLILAKIIREFEIIVEEELDL 497


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 22  HFMPFSIGKRTCIG 63
           H++PF  G R CIG
Sbjct: 433 HYLPFGDGPRNCIG 446


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 134 KMPTIWYKYRLVLPYPKTLIIY 199
           KM T  Y+  L +PY    IIY
Sbjct: 131 KMATELYEESLFVPYITNFIIY 152


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = -3

Query: 202 DINYKCLWVGQHKP 161
           ++  +C W+G H+P
Sbjct: 346 ELQKRCKWMGIHEP 359


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = -3

Query: 202 DINYKCLWVGQHKP 161
           ++  +C W+G H+P
Sbjct: 346 ELQKRCKWMGIHEP 359


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,519
Number of Sequences: 438
Number of extensions: 3017
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)